Namespace encapsulated evb with name EventBuilder

README.md

@@ -14,7 +14,9 @@ Then, in the `build` directory, run the following command to build and install t
 
 `cmake -DCMAKE_BUILD_TYPE=Release .. && make install`
 
-This will compile and link all event builder programs and dependencies. The executables will be installed to the `bin` directory of the SPS_SABRE_EventBuilder directory, shared libraries for ROOT dictionaries will be in the `lib` directory (with necessary .pcm files), and the header files for the shared libraries will be installed to the `include` directory. 
+This will compile and link all event builder programs and dependencies. The executables will be installed to the `bin` directory of the SPS_SABRE_EventBuilder directory, shared libraries for ROOT dictionaries will be in the `lib` directory (with necessary .pcm files), and the header files for the shared libraries will be installed to the `include` directory. To rebuild the program after a change to the code (assuming no files were added), simply run 
+
+`make clean && make install`
 
 ## GWMEVB vs. GWMEVB_CL
 There are two programs provided. They are `EventBuilderGui` and `EventBuilder`. The first is a full GUI version of the event builder. The GUI supports all conversion methods and the plotting tool.

include/EVBMainFrame.h

@@ -94,7 +94,7 @@ private:
 
 	TGPopupMenu *fFileMenu;
 
-	EVBApp fBuilder;
+	EventBuilder::EVBApp fBuilder;
 
 	int counter;
 	UInt_t MAIN_W, MAIN_H;

src/evb/ChannelMap.cpp

@@ -9,86 +9,89 @@
 #include "EventBuilder.h"
 #include "ChannelMap.h"
 
-ChannelMap::ChannelMap() :
+namespace EventBuilder {
-	m_validFlag(false)
-{
-}
 
-ChannelMap::ChannelMap(const std::string& name) :
+	ChannelMap::ChannelMap() :
-	m_validFlag(false)
+		m_validFlag(false)
-{
-	FillMap(name);
-}
-
-ChannelMap::~ChannelMap() {}
-
-bool ChannelMap::FillMap(const std::string& name) 
-{
-	std::ifstream input(name);
-	if(!input.is_open()) 
 	{
-		m_validFlag = false;
+	}
+	
+	ChannelMap::ChannelMap(const std::string& name) :
+		m_validFlag(false)
+	{
+		FillMap(name);
+	}
+	
+	ChannelMap::~ChannelMap() {}
+	
+	bool ChannelMap::FillMap(const std::string& name) 
+	{
+		std::ifstream input(name);
+		if(!input.is_open()) 
+		{
+			m_validFlag = false;
+			return m_validFlag;
+		}
+		std::string junk, type, partname;
+		int gchan, id;
+	
+		std::getline(input, junk);
+		std::getline(input, junk);
+		Channel this_chan;
+		while(input>>gchan) 
+		{
+			//Set default values
+			this_chan.type = DetType::NoneType;
+			this_chan.local_channel = -1;
+			this_chan.attribute = DetAttribute::NoneAttr;
+			input>>id>>type>>partname;
+			if(type == "SABRERING")
+			{
+				this_chan.type = DetType::Sabre;
+				switch(id)
+				{
+					case 0: this_chan.attribute = DetAttribute::SabreRing0; break;
+					case 1: this_chan.attribute = DetAttribute::SabreRing1; break;
+					case 2: this_chan.attribute = DetAttribute::SabreRing2; break;
+					case 3: this_chan.attribute = DetAttribute::SabreRing3; break;
+					case 4: this_chan.attribute = DetAttribute::SabreRing4; break;
+				}
+				this_chan.local_channel = std::stoi(partname);
+			} 
+			else if(type == "SABREWEDGE") 
+			{
+				this_chan.type = DetType::Sabre;
+				switch(id)
+				{
+					case 0: this_chan.attribute = DetAttribute::SabreWedge0; break;
+					case 1: this_chan.attribute = DetAttribute::SabreWedge1; break;
+					case 2: this_chan.attribute = DetAttribute::SabreWedge2; break;
+					case 3: this_chan.attribute = DetAttribute::SabreWedge3; break;
+					case 4: this_chan.attribute = DetAttribute::SabreWedge4; break;
+				}
+				this_chan.local_channel = std::stoi(partname);
+			} 
+			else if (type == "FOCALPLANE") 
+			{
+				this_chan.type = DetType::FocalPlane;
+				this_chan.local_channel = id;
+				if(partname == "SCINTRIGHT") this_chan.attribute = DetAttribute::ScintRight;
+				else if(partname == "SCINTLEFT") this_chan.attribute = DetAttribute::ScintLeft;
+				else if(partname == "DELAYFR") this_chan.attribute = DetAttribute::DelayFR;
+				else if(partname == "DELAYFL") this_chan.attribute = DetAttribute::DelayFL;
+				else if(partname == "DELAYBR") this_chan.attribute = DetAttribute::DelayBR;
+				else if(partname == "DELAYBL") this_chan.attribute = DetAttribute::DelayBL;
+				else if(partname == "CATHODE") this_chan.attribute = DetAttribute::Cathode;
+				else if(partname == "ANODEFRONT") this_chan.attribute = DetAttribute::AnodeFront;
+				else if(partname == "ANODEBACK") this_chan.attribute = DetAttribute::AnodeBack;
+				else if(partname == "MONITOR") this_chan.attribute = DetAttribute::Monitor;
+			}
+	
+			m_cmap[gchan] = this_chan;
+		}
+	
+		input.close();
+		m_validFlag = true;
 		return m_validFlag;
 	}
-	std::string junk, type, partname;
+}
-	int gchan, id;
-
-	std::getline(input, junk);
-	std::getline(input, junk);
-	Channel this_chan;
-	while(input>>gchan) 
-	{
-		//Set default values
-		this_chan.type = DetType::NoneType;
-		this_chan.local_channel = -1;
-		this_chan.attribute = DetAttribute::NoneAttr;
-		input>>id>>type>>partname;
-		if(type == "SABRERING")
-		{
-			this_chan.type = DetType::Sabre;
-			switch(id)
-			{
-				case 0: this_chan.attribute = DetAttribute::SabreRing0; break;
-				case 1: this_chan.attribute = DetAttribute::SabreRing1; break;
-				case 2: this_chan.attribute = DetAttribute::SabreRing2; break;
-				case 3: this_chan.attribute = DetAttribute::SabreRing3; break;
-				case 4: this_chan.attribute = DetAttribute::SabreRing4; break;
-			}
-			this_chan.local_channel = std::stoi(partname);
-		} 
-		else if(type == "SABREWEDGE") 
-		{
-			this_chan.type = DetType::Sabre;
-			switch(id)
-			{
-				case 0: this_chan.attribute = DetAttribute::SabreWedge0; break;
-				case 1: this_chan.attribute = DetAttribute::SabreWedge1; break;
-				case 2: this_chan.attribute = DetAttribute::SabreWedge2; break;
-				case 3: this_chan.attribute = DetAttribute::SabreWedge3; break;
-				case 4: this_chan.attribute = DetAttribute::SabreWedge4; break;
-			}
-			this_chan.local_channel = std::stoi(partname);
-		} 
-		else if (type == "FOCALPLANE") 
-		{
-			this_chan.type = DetType::FocalPlane;
-			this_chan.local_channel = id;
-			if(partname == "SCINTRIGHT") this_chan.attribute = DetAttribute::ScintRight;
-			else if(partname == "SCINTLEFT") this_chan.attribute = DetAttribute::ScintLeft;
-			else if(partname == "DELAYFR") this_chan.attribute = DetAttribute::DelayFR;
-			else if(partname == "DELAYFL") this_chan.attribute = DetAttribute::DelayFL;
-			else if(partname == "DELAYBR") this_chan.attribute = DetAttribute::DelayBR;
-			else if(partname == "DELAYBL") this_chan.attribute = DetAttribute::DelayBL;
-			else if(partname == "CATHODE") this_chan.attribute = DetAttribute::Cathode;
-			else if(partname == "ANODEFRONT") this_chan.attribute = DetAttribute::AnodeFront;
-			else if(partname == "ANODEBACK") this_chan.attribute = DetAttribute::AnodeBack;
-			else if(partname == "MONITOR") this_chan.attribute = DetAttribute::Monitor;
-		}
-
-		m_cmap[gchan] = this_chan;
-	}
-
-	input.close();
-	m_validFlag = true;
-	return m_validFlag;
-}

src/evb/ChannelMap.h

@@ -9,66 +9,67 @@
 #ifndef CHANNELMAP_H
 #define CHANNELMAP_H
 
-//Detector part/type identifiers for use in the code
+namespace EventBuilder {
-enum DetType
+	//Detector part/type identifiers for use in the code
-{
+	enum DetType
-	Sabre,
+	{
-	FocalPlane,
+		Sabre,
-	NoneType
+		FocalPlane,
-};
+		NoneType
-
+	};
-enum DetAttribute 
-{
-	ScintLeft,
-	ScintRight,
-	AnodeFront,
-	AnodeBack,
-	DelayFR,
-	DelayFL,
-	DelayBR,
-	DelayBL,
-	Cathode,
-	Monitor,
-	SabreRing0,
-	SabreRing1,
-	SabreRing2,
-	SabreRing3,
-	SabreRing4,
-	SabreWedge0,
-	SabreWedge1,
-	SabreWedge2,
-	SabreWedge3,
-	SabreWedge4,
-	NoneAttr
-};
-
-struct Channel 
-{
-	DetType type;
-	DetAttribute attribute; //What kind of detector we're looking at
-	int local_channel; //Which specific piece of detector we're looking at
-};
-
-class ChannelMap 
-{
 	
-public:
+	enum DetAttribute 
-	typedef std::unordered_map<int, Channel> Containter;
+	{
-	typedef std::unordered_map<int, Channel>::iterator Iterator;
+		ScintLeft,
-
+		ScintRight,
-	ChannelMap();
+		AnodeFront,
-	ChannelMap(const std::string& filename);
+		AnodeBack,
-	~ChannelMap();
+		DelayFR,
-	bool FillMap(const std::string& filename);
+		DelayFL,
-	inline const Containter* GetCMap() { return &m_cmap; };
+		DelayBR,
-	inline Iterator FindChannel(int key) { return m_cmap.find(key); };
+		DelayBL,
-	inline Iterator End() { return m_cmap.end(); };
+		Cathode,
-	inline bool IsValid() { return m_validFlag; };
+		Monitor,
-
+		SabreRing0,
-private:
+		SabreRing1,
-	Containter m_cmap;
+		SabreRing2,
-	bool m_validFlag;
+		SabreRing3,
-};
+		SabreRing4,
-
+		SabreWedge0,
+		SabreWedge1,
+		SabreWedge2,
+		SabreWedge3,
+		SabreWedge4,
+		NoneAttr
+	};
+	
+	struct Channel 
+	{
+		DetType type;
+		DetAttribute attribute; //What kind of detector we're looking at
+		int local_channel; //Which specific piece of detector we're looking at
+	};
+	
+	class ChannelMap 
+	{
+		
+	public:
+		typedef std::unordered_map<int, Channel> Containter;
+		typedef std::unordered_map<int, Channel>::iterator Iterator;
+	
+		ChannelMap();
+		ChannelMap(const std::string& filename);
+		~ChannelMap();
+		bool FillMap(const std::string& filename);
+		inline const Containter* GetCMap() { return &m_cmap; };
+		inline Iterator FindChannel(int key) { return m_cmap.find(key); };
+		inline Iterator End() { return m_cmap.end(); };
+		inline bool IsValid() { return m_validFlag; };
+	
+	private:
+		Containter m_cmap;
+		bool m_validFlag;
+	};
+}
 
 #endif

src/evb/CompassFile.cpp

@@ -11,157 +11,161 @@
 #include "EventBuilder.h"
 #include "CompassFile.h"
 
-CompassFile::CompassFile() :
+namespace EventBuilder {
-	m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
-{
-	m_buffersize = bufsize*hitsize;
-	hitBuffer.resize(m_buffersize);
-}
 
-CompassFile::CompassFile(const std::string& filename) :
+	CompassFile::CompassFile() :
-	m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
+		m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
-{
-	m_buffersize = bufsize*hitsize;
-	hitBuffer.resize(m_buffersize);
-	Open(filename);
-}
-
-CompassFile::CompassFile(const std::string& filename, int bsize) :
-	m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true),
-	bufsize(bsize), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
-{
-	m_buffersize = bufsize*hitsize;
-	hitBuffer.resize(m_buffersize);
-	Open(filename);
-}
-
-CompassFile::~CompassFile() 
-{
-	Close();
-}
-
-void CompassFile::Open(const std::string& filename) 
-{
-	eofFlag = false;
-	hitUsedFlag = true;
-	m_filename = filename;
-	m_file->open(m_filename, std::ios::binary | std::ios::in);
-
-	m_file->seekg(0, std::ios_base::end);
-	m_size = m_file->tellg();
-	m_nHits = m_size/24;
-	if(m_size == 0) 
 	{
-		eofFlag = true;
+		m_buffersize = bufsize*hitsize;
-	} 
+		hitBuffer.resize(m_buffersize);
-	else 
+	}
+	
+	CompassFile::CompassFile(const std::string& filename) :
+		m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
 	{
+		m_buffersize = bufsize*hitsize;
+		hitBuffer.resize(m_buffersize);
+		Open(filename);
+	}
+	
+	CompassFile::CompassFile(const std::string& filename, int bsize) :
+		m_filename(""), bufferIter(nullptr), bufferEnd(nullptr), m_smap(nullptr), hitUsedFlag(true),
+		bufsize(bsize), m_file(std::make_shared<std::ifstream>()), eofFlag(false)
+	{
+		m_buffersize = bufsize*hitsize;
+		hitBuffer.resize(m_buffersize);
+		Open(filename);
+	}
+	
+	CompassFile::~CompassFile() 
+	{
+		Close();
+	}
+	
+	void CompassFile::Open(const std::string& filename) 
+	{
+		eofFlag = false;
+		hitUsedFlag = true;
+		m_filename = filename;
+		m_file->open(m_filename, std::ios::binary | std::ios::in);
+	
+		m_file->seekg(0, std::ios_base::end);
+		m_size = m_file->tellg();
+		m_nHits = m_size/24;
+		if(m_size == 0) 
+		{
+			eofFlag = true;
+		} 
+		else 
+		{
+			m_file->seekg(0, std::ios_base::beg);
+		}
+	}
+	
+	void CompassFile::Close() 
+	{
+		if(IsOpen()) 
+		{
+			m_file->close();
+		}
+	}
+	
+	int CompassFile::GetHitSize() 
+	{
+		if(!IsOpen()) 
+		{
+			std::cerr<<"Unable to get hit size due to file not being open!"<<std::endl;
+			return 0;
+		}
+	
+		char* firstHit = new char[24]; //A compass hit by default has 24 bytes (at least in our setup)
+	
+		m_file->read(firstHit, 24);
+	
+		firstHit += 16;
+		int nsamples = *((uint32_t*) firstHit);
+	
 		m_file->seekg(0, std::ios_base::beg);
+	
+		delete firstHit;
+	
+		return 24 + nsamples*16; 
+	
 	}
-}
+	
-
+	/*
-void CompassFile::Close() 
+		GetNextHit() is the function which... gets the next hit
-{
+		Has to check if the buffer needs refilled/filled for the first time
-	if(IsOpen()) 
+		Upon pulling a hit, sets the UsedFlag to false, letting the next level know
+		that the hit should be free game.
+	
+		If the file cannot be opened, signals as though file is EOF
+	*/
+	bool CompassFile::GetNextHit()
 	{
-		m_file->close();
+		if(!IsOpen()) return true;
+	
+		if((bufferIter == nullptr || bufferIter == bufferEnd) && !IsEOF()) 
+		{
+			GetNextBuffer();
+		}
+	
+		if(!IsEOF()) 
+		{
+			ParseNextHit();
+			hitUsedFlag = false;
+		}
+	
+		return eofFlag;
 	}
-}
+	
-
+	/*
-int CompassFile::GetHitSize() 
+		GetNextBuffer() ... self-explanatory name
-{
+		Note tht this is where the EOF flag is set. The EOF is only singaled
-	if(!IsOpen()) 
+		after the LAST buffer is completely read (i.e literally no more data). ifstream sets its eof 
+		bit upon pulling the last buffer, but this class waits until that entire
+		last buffer is read to singal EOF (the true end of file). 
+	*/
+	void CompassFile::GetNextBuffer() 
 	{
-		std::cerr<<"Unable to get hit size due to file not being open!"<<std::endl;
+	
-		return 0;
+		if(m_file->eof()) 
+		{
+			eofFlag = true;
+			return;
+		}
+	
+		m_file->read(hitBuffer.data(), hitBuffer.size());
+	
+		bufferIter = hitBuffer.data();
+		bufferEnd = bufferIter + m_file->gcount(); //one past the last datum
+	
 	}
-
+	
-	char* firstHit = new char[24]; //A compass hit by default has 24 bytes (at least in our setup)
+	void CompassFile::ParseNextHit() 
-
-	m_file->read(firstHit, 24);
-
-	firstHit += 16;
-	int nsamples = *((uint32_t*) firstHit);
-
-	m_file->seekg(0, std::ios_base::beg);
-
-	delete firstHit;
-
-	return 24 + nsamples*16; 
-
-}
-
-/*
-	GetNextHit() is the function which... gets the next hit
-	Has to check if the buffer needs refilled/filled for the first time
-	Upon pulling a hit, sets the UsedFlag to false, letting the next level know
-	that the hit should be free game.
-
-	If the file cannot be opened, signals as though file is EOF
-*/
-bool CompassFile::GetNextHit()
-{
-	if(!IsOpen()) return true;
-
-	if((bufferIter == nullptr || bufferIter == bufferEnd) && !IsEOF()) 
 	{
-		GetNextBuffer();
+	
+		m_currentHit.board = *((uint16_t*)bufferIter);
+		bufferIter += 2;
+		m_currentHit.channel = *((uint16_t*)bufferIter);
+		bufferIter += 2;
+		m_currentHit.timestamp = *((uint64_t*)bufferIter);
+		bufferIter += 8;
+		m_currentHit.lgate = *((uint16_t*)bufferIter);
+		bufferIter += 2;
+		m_currentHit.sgate = *((uint16_t*)bufferIter);
+		bufferIter += 2;
+		m_currentHit.flags = *((uint32_t*)bufferIter);
+		bufferIter += 4;
+		m_currentHit.Ns = *((uint32_t*)bufferIter);
+		bufferIter += 4;
+	
+		if(m_smap != nullptr) 
+		{ //memory safety
+			int gchan = m_currentHit.channel + m_currentHit.board*16;
+			m_currentHit.timestamp += m_smap->GetShift(gchan);
+		}
+	
 	}
 
-	if(!IsEOF()) 
+}
-	{
-		ParseNextHit();
-		hitUsedFlag = false;
-	}
-
-	return eofFlag;
-}
-
-/*
-	GetNextBuffer() ... self-explanatory name
-	Note tht this is where the EOF flag is set. The EOF is only singaled
-	after the LAST buffer is completely read (i.e literally no more data). ifstream sets its eof 
-	bit upon pulling the last buffer, but this class waits until that entire
-	last buffer is read to singal EOF (the true end of file). 
-*/
-void CompassFile::GetNextBuffer() 
-{
-
-	if(m_file->eof()) 
-	{
-		eofFlag = true;
-		return;
-	}
-
-	m_file->read(hitBuffer.data(), hitBuffer.size());
-
-	bufferIter = hitBuffer.data();
-	bufferEnd = bufferIter + m_file->gcount(); //one past the last datum
-
-}
-
-void CompassFile::ParseNextHit() 
-{
-
-	m_currentHit.board = *((uint16_t*)bufferIter);
-	bufferIter += 2;
-	m_currentHit.channel = *((uint16_t*)bufferIter);
-	bufferIter += 2;
-	m_currentHit.timestamp = *((uint64_t*)bufferIter);
-	bufferIter += 8;
-	m_currentHit.lgate = *((uint16_t*)bufferIter);
-	bufferIter += 2;
-	m_currentHit.sgate = *((uint16_t*)bufferIter);
-	bufferIter += 2;
-	m_currentHit.flags = *((uint32_t*)bufferIter);
-	bufferIter += 4;
-	m_currentHit.Ns = *((uint32_t*)bufferIter);
-	bufferIter += 4;
-
-	if(m_smap != nullptr) 
-	{ //memory safety
-		int gchan = m_currentHit.channel + m_currentHit.board*16;
-		m_currentHit.timestamp += m_smap->GetShift(gchan);
-	}
-
-}

src/evb/CompassFile.h

@@ -15,57 +15,60 @@
 #include "ShiftMap.h"
 #include <memory>
 
-class CompassFile 
+namespace EventBuilder {
-{
+
+	class CompassFile 
+	{
+		
+	public:
+		CompassFile();
+		CompassFile(const std::string& filename);
+		CompassFile(const std::string& filename, int bsize);
+		~CompassFile();
+		void Open(const std::string& filename);
+		void Close();
+		bool GetNextHit();
 	
-public:
+		inline bool IsOpen() const { return m_file->is_open(); };
-	CompassFile();
+		inline CompassHit GetCurrentHit() const { return m_currentHit; }
-	CompassFile(const std::string& filename);
+		inline std::string GetName() const { return  m_filename; }
-	CompassFile(const std::string& filename, int bsize);
+		inline bool CheckHitHasBeenUsed() const { return hitUsedFlag; } //query to find out if we've used the current hit
-	~CompassFile();
+		inline void SetHitHasBeenUsed() { hitUsedFlag = true; } //flip the flag to indicate the current hit has been used
-	void Open(const std::string& filename);
+		inline bool IsEOF() const { return eofFlag; } //see if we've read all available data
-	void Close();
+		inline bool* GetUsedFlagPtr() { return &hitUsedFlag; }
-	bool GetNextHit();
+		inline void AttachShiftMap(ShiftMap* map) { m_smap = map; }
-
+		inline unsigned int GetSize() const { return m_size; }
-	inline bool IsOpen() const { return m_file->is_open(); };
+		inline unsigned int GetNumberOfHits() const { return m_nHits; }
-	inline CompassHit GetCurrentHit() const { return m_currentHit; }
+	
-	inline std::string GetName() const { return  m_filename; }
+	
-	inline bool CheckHitHasBeenUsed() const { return hitUsedFlag; } //query to find out if we've used the current hit
+	private:
-	inline void SetHitHasBeenUsed() { hitUsedFlag = true; } //flip the flag to indicate the current hit has been used
+		int GetHitSize();
-	inline bool IsEOF() const { return eofFlag; } //see if we've read all available data
+		void ParseNextHit();
-	inline bool* GetUsedFlagPtr() { return &hitUsedFlag; }
+		void GetNextBuffer();
-	inline void AttachShiftMap(ShiftMap* map) { m_smap = map; }
+	
-	inline unsigned int GetSize() const { return m_size; }
+		using Buffer = std::vector<char>;
-	inline unsigned int GetNumberOfHits() const { return m_nHits; }
+	
-
+		using FilePointer = std::shared_ptr<std::ifstream>; //to make this class copy/movable
-
+	
-private:
+		std::string m_filename;
-	int GetHitSize();
+		Buffer hitBuffer;
-	void ParseNextHit();
+		char* bufferIter;
-	void GetNextBuffer();
+		char* bufferEnd;
-
+		ShiftMap* m_smap; //NOT owned by CompassFile. DO NOT delete
-	using Buffer = std::vector<char>;
+	
-
+		bool hitUsedFlag;
-	using FilePointer = std::shared_ptr<std::ifstream>; //to make this class copy/movable
+		int bufsize = 200000; //size of the buffer in hits
-
+		int hitsize = 24; //size of a CompassHit in bytes (without alignment padding)
-	std::string m_filename;
+		int m_buffersize;
-	Buffer hitBuffer;
+	
-	char* bufferIter;
+		CompassHit m_currentHit;
-	char* bufferEnd;
+		FilePointer m_file;
-	ShiftMap* m_smap; //NOT owned by CompassFile. DO NOT delete
+		bool eofFlag;
-
+		unsigned int m_size; //size of the file in bytes
-	bool hitUsedFlag;
+		unsigned int m_nHits; //number of hits in the file (m_size/24)
-	int bufsize = 200000; //size of the buffer in hits
+	
-	int hitsize = 24; //size of a CompassHit in bytes (without alignment padding)
+	};
-	int m_buffersize;
-
-	CompassHit m_currentHit;
-	FilePointer m_file;
-	bool eofFlag;
-	unsigned int m_size; //size of the file in bytes
-	unsigned int m_nHits; //number of hits in the file (m_size/24)
-
-};
 
+}
 
 #endif

src/evb/CompassHit.h

@@ -1,15 +1,19 @@
 #ifndef COMPASS_HIT_H
 #define COMPASS_HIT_H
 
-struct CompassHit 
+namespace EventBuilder {
-{
+
-  uint16_t board = 400;
+  struct CompassHit 
-  uint16_t channel = 400;
+  {
-  uint64_t timestamp = 0;
+    uint16_t board = 400;
-  uint16_t lgate = 0;
+    uint16_t channel = 400;
-  uint16_t sgate = 0;
+    uint64_t timestamp = 0;
-  uint32_t flags = 0;
+    uint16_t lgate = 0;
-  uint32_t Ns = 0;
+    uint16_t sgate = 0;
-};
+    uint32_t flags = 0;
+    uint32_t Ns = 0;
+  };
+
+}
 
 #endif

src/evb/CompassRun.h

@@ -18,54 +18,58 @@
 #include <TGProgressBar.h>
 #include <TSystem.h>
 
-class CompassRun 
+namespace EventBuilder {
-{
+	
+	class CompassRun 
+	{
+	
+	public:
+		CompassRun();
+		CompassRun(const std::string& dir);
+		~CompassRun();
+		inline void SetDirectory(const std::string& dir) { m_directory = dir; }
+		inline void SetScalerInput(const std::string& filename) { m_scalerinput = filename; }
+		inline void SetRunNumber(int n) { m_runNum = n; }
+		inline void SetShiftMap(const std::string& filename) { m_smap.SetFile(filename); }
+		void Convert2RawRoot(const std::string& name);
+		void Convert2SortedRoot(const std::string& name, const std::string& mapfile, double window);
+		void Convert2FastSortedRoot(const std::string& name, const std::string& mapfile, double window, double fsi_window, double fic_window);
+		void Convert2SlowAnalyzedRoot(const std::string& name, const std::string& mapfile, double window,
+								  int zt, int at, int zp, int ap, int ze, int ae, double bke, double b, double theta);
+		void Convert2FastAnalyzedRoot(const std::string& name, const std::string& mapfile, double window, double fsi_window, double fic_window,
+								  int zt, int at, int zp, int ap, int ze, int ae, double bke, double b, double theta);
+	
+		inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
+	
+	private:
+		bool GetBinaryFiles();
+		bool GetHitsFromFiles();
+		void SetScalers();
+		void ReadScalerData(const std::string& filename);
+		void SetProgressBar();
+	
+		std::string m_directory, m_scalerinput;
+		std::vector<CompassFile> m_datafiles;
+		unsigned int startIndex; //this is the file we start looking at; increases as we finish files.
+		ShiftMap m_smap;
+		std::unordered_map<std::string, TParameter<Long64_t>> m_scaler_map; //maps scaler files to the TParameter to be saved
+	
+		//Potential branch variables
+		CompassHit hit;
+		CoincEvent event;
+		ProcessedEvent pevent;
+	
+		//what run is this
+		int m_runNum;
+		unsigned int m_totalHits;
+	
+		//Scaler switch
+		bool m_scaler_flag;
+	
+		//GUI progress bar, if attached
+		TGProgressBar* m_pb;
+	};
 
-public:
+}
-	CompassRun();
-	CompassRun(const std::string& dir);
-	~CompassRun();
-	inline void SetDirectory(const std::string& dir) { m_directory = dir; }
-	inline void SetScalerInput(const std::string& filename) { m_scalerinput = filename; }
-	inline void SetRunNumber(int n) { m_runNum = n; }
-	inline void SetShiftMap(const std::string& filename) { m_smap.SetFile(filename); }
-	void Convert2RawRoot(const std::string& name);
-	void Convert2SortedRoot(const std::string& name, const std::string& mapfile, double window);
-	void Convert2FastSortedRoot(const std::string& name, const std::string& mapfile, double window, double fsi_window, double fic_window);
-	void Convert2SlowAnalyzedRoot(const std::string& name, const std::string& mapfile, double window,
-							  int zt, int at, int zp, int ap, int ze, int ae, double bke, double b, double theta);
-	void Convert2FastAnalyzedRoot(const std::string& name, const std::string& mapfile, double window, double fsi_window, double fic_window,
-							  int zt, int at, int zp, int ap, int ze, int ae, double bke, double b, double theta);
-
-	inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
-
-private:
-	bool GetBinaryFiles();
-	bool GetHitsFromFiles();
-	void SetScalers();
-	void ReadScalerData(const std::string& filename);
-	void SetProgressBar();
-
-	std::string m_directory, m_scalerinput;
-	std::vector<CompassFile> m_datafiles;
-	unsigned int startIndex; //this is the file we start looking at; increases as we finish files.
-	ShiftMap m_smap;
-	std::unordered_map<std::string, TParameter<Long64_t>> m_scaler_map; //maps scaler files to the TParameter to be saved
-
-	//Potential branch variables
-	CompassHit hit;
-	CoincEvent event;
-	ProcessedEvent pevent;
-
-	//what run is this
-	int m_runNum;
-	unsigned int m_totalHits;
-
-	//Scaler switch
-	bool m_scaler_flag;
-
-	//GUI progress bar, if attached
-	TGProgressBar* m_pb;
-};
 
 #endif

src/evb/CutHandler.cpp

@@ -1,104 +1,108 @@
 #include "EventBuilder.h"
 #include "CutHandler.h"
 
-CutHandler::CutHandler() :
+namespace EventBuilder {
-	validFlag(false)
+	
- {
+	CutHandler::CutHandler() :
-	InitVariableMap();
+		validFlag(false)
- }
+	 {
-
+		InitVariableMap();
-CutHandler::CutHandler(const std::string& filename) :
+	 }
-	validFlag(false)
+	
-{
+	CutHandler::CutHandler(const std::string& filename) :
-	SetCuts(filename);
+		validFlag(false)
-	InitVariableMap();
-}
-
-CutHandler::~CutHandler() 
-{
-	for(unsigned int i=0; i<file_array.size(); i++)
-		if(file_array[i]->IsOpen())
-			file_array[i]->Close();
-}
-
-void CutHandler::SetCuts(const std::string& filename) 
-{
-	std::ifstream cutlist(filename);
-
-	if(!cutlist.is_open()) 
 	{
-		validFlag = false;
+		SetCuts(filename);
+		InitVariableMap();
 	}
-
+	
-	std::string junk, name, fname, varx, vary;
+	CutHandler::~CutHandler() 
-	cutlist>>junk>>junk>>junk>>junk;
-
-	cut_array.clear();
-	file_array.clear();
-
-	while(cutlist>>name) 
 	{
-		cutlist>>fname>>varx>>vary;
+		for(unsigned int i=0; i<file_array.size(); i++)
-		TFile* file = TFile::Open(fname.c_str(), "READ");
+			if(file_array[i]->IsOpen())
-		TCutG* cut = (TCutG*) file->Get("CUTG");
+				file_array[i]->Close();
-		if(cut) 
+	}
-		{
+	
-			cut->SetVarX(varx.c_str());
+	void CutHandler::SetCuts(const std::string& filename) 
-			cut->SetVarY(vary.c_str());
+	{
-			cut->SetName(name.c_str());
+		std::ifstream cutlist(filename);
-			cut_array.push_back(cut);
+	
-			file_array.push_back(file);
+		if(!cutlist.is_open()) 
-		} 
-		else 
 		{
 			validFlag = false;
-			std::cerr<<"CutHandler has encountered a bad cut at file: "<<file<<"."<<std::endl;
-			std::cerr<<"The file either does not exist or does not contain a TCutG named CUTG"<<std::endl;
-			std::cerr<<"Cuts will not be used."<<std::endl;
-			return;
 		}
-	}
+	
-
+		std::string junk, name, fname, varx, vary;
-	if(cut_array.size() > 0)
+		cutlist>>junk>>junk>>junk>>junk;
-		validFlag = true;
+	
-	else
+		cut_array.clear();
-		validFlag = false;
+		file_array.clear();
-}
+	
-
+		while(cutlist>>name) 
-/*
-	ADD MORE VARIABLES HERE!
-*/
-void CutHandler::InitVariableMap() 
-{
-	varmap["x1"] = &m_event.x1;
-	varmap["x2"] = &m_event.x2;
-	varmap["xavg"] = &m_event.xavg;
-	varmap["scintLeft"] = &m_event.scintLeft;
-	varmap["anodeBack"]  = &m_event.anodeBack;
-	varmap["cathode"] = &m_event.cathode;
-}
-
-bool CutHandler::IsInside(const ProcessedEvent* eaddress) 
-{
-	m_event = *eaddress;
-	std::string x, y;
-	for(unsigned int i=0; i<cut_array.size(); i++) 
-	{
-		TCutG* cut = cut_array[i];
-		x = cut->GetVarX();
-		y = cut->GetVarY();
-		auto xentry = varmap.find(x);
-		auto yentry = varmap.find(y);
-		if(xentry == varmap.end() || yentry == varmap.end()) 
 		{
-			std::cerr<<"Unmapped variable called in CutHandler::IsInside()! Var names: "<<xentry->first<<" , "<<yentry->first<<std::endl;
+			cutlist>>fname>>varx>>vary;
-			return false;
+			TFile* file = TFile::Open(fname.c_str(), "READ");
+			TCutG* cut = (TCutG*) file->Get("CUTG");
+			if(cut) 
+			{
+				cut->SetVarX(varx.c_str());
+				cut->SetVarY(vary.c_str());
+				cut->SetName(name.c_str());
+				cut_array.push_back(cut);
+				file_array.push_back(file);
+			} 
+			else 
+			{
+				validFlag = false;
+				std::cerr<<"CutHandler has encountered a bad cut at file: "<<file<<"."<<std::endl;
+				std::cerr<<"The file either does not exist or does not contain a TCutG named CUTG"<<std::endl;
+				std::cerr<<"Cuts will not be used."<<std::endl;
+				return;
+			}
 		}
-
+	
-		if(!cut->IsInside(*(xentry->second), *(yentry->second)))
+		if(cut_array.size() > 0)
-			return false;
+			validFlag = true;
-		
+		else
+			validFlag = false;
+	}
+	
+	/*
+		ADD MORE VARIABLES HERE!
+	*/
+	void CutHandler::InitVariableMap() 
+	{
+		varmap["x1"] = &m_event.x1;
+		varmap["x2"] = &m_event.x2;
+		varmap["xavg"] = &m_event.xavg;
+		varmap["scintLeft"] = &m_event.scintLeft;
+		varmap["anodeBack"]  = &m_event.anodeBack;
+		varmap["cathode"] = &m_event.cathode;
+	}
+	
+	bool CutHandler::IsInside(const ProcessedEvent* eaddress) 
+	{
+		m_event = *eaddress;
+		std::string x, y;
+		for(unsigned int i=0; i<cut_array.size(); i++) 
+		{
+			TCutG* cut = cut_array[i];
+			x = cut->GetVarX();
+			y = cut->GetVarY();
+			auto xentry = varmap.find(x);
+			auto yentry = varmap.find(y);
+			if(xentry == varmap.end() || yentry == varmap.end()) 
+			{
+				std::cerr<<"Unmapped variable called in CutHandler::IsInside()! Var names: "<<xentry->first<<" , "<<yentry->first<<std::endl;
+				return false;
+			}
+	
+			if(!cut->IsInside(*(xentry->second), *(yentry->second)))
+				return false;
+			
+		}
+	
+		return true;
 	}
 
-	return true;
+}
-}

src/evb/CutHandler.h

@@ -1,27 +1,30 @@
 #ifndef CUTHANDLER_H
 #define CUTHANDLER_H
 
-#include "DataStructs.h"
+#include "../spsdict/DataStructs.h"
 
-class CutHandler {
+namespace EventBuilder {
-public:
+	
-	CutHandler();
+	class CutHandler {
-	CutHandler(const std::string& filename);
+	public:
-	~CutHandler();
+		CutHandler();
-	void SetCuts(const std::string& filename);
+		CutHandler(const std::string& filename);
-	bool IsValid() { return validFlag; }
+		~CutHandler();
-	bool IsInside(const ProcessedEvent* eaddress);
+		void SetCuts(const std::string& filename);
-	std::vector<TCutG*> GetCuts() { return cut_array; }
+		bool IsValid() { return validFlag; }
+		bool IsInside(const ProcessedEvent* eaddress);
+		std::vector<TCutG*> GetCuts() { return cut_array; }
+	
+	private:
+		void InitVariableMap();
+	
+		std::vector<TCutG*> cut_array;
+		std::vector<TFile*> file_array;
+		std::unordered_map<std::string, double*> varmap;
+		bool validFlag;
+		ProcessedEvent m_event;	
+	};
 
-private:
+}
-	void InitVariableMap();
-
-	std::vector<TCutG*> cut_array;
-	std::vector<TFile*> file_array;
-	std::unordered_map<std::string, double*> varmap;
-	bool validFlag;
-	ProcessedEvent m_event;
-
-};
 
 #endif

src/evb/EVBApp.cpp

@@ -16,421 +16,425 @@
 #include "SFPAnalyzer.h"
 #include "SFPPlotter.h"
 
-EVBApp::EVBApp() :
+namespace EventBuilder {
-	m_rmin(0), m_rmax(0), m_ZT(0), m_AT(0), m_ZP(0), m_AP(0), m_ZE(0), m_AE(0), m_ZR(0), m_AR(0),
+	
-	m_B(0), m_Theta(0), m_BKE(0), m_workspace("none"), m_mapfile("none"), m_shiftfile("none"),
+	EVBApp::EVBApp() :
-	m_cutList("none"), m_SlowWindow(0), m_FastWindowIonCh(0), m_FastWindowSABRE(0), m_pb(nullptr)
+		m_rmin(0), m_rmax(0), m_ZT(0), m_AT(0), m_ZP(0), m_AP(0), m_ZE(0), m_AE(0), m_ZR(0), m_AR(0),
-{
+		m_B(0), m_Theta(0), m_BKE(0), m_workspace("none"), m_mapfile("none"), m_shiftfile("none"),
-}
+		m_cutList("none"), m_SlowWindow(0), m_FastWindowIonCh(0), m_FastWindowSABRE(0), m_pb(nullptr)
-
-EVBApp::~EVBApp() 
-{
-}
-
-bool EVBApp::ReadConfigFile(const std::string& fullpath) 
-{
-	std::cout<<"Reading in configuration from file: "<<fullpath<<std::endl;
-	std::ifstream input(fullpath);
-	if(!input.is_open()) 
 	{
-		std::cout<<"Read failed! Unable to open input file!"<<std::endl;
-		return false;
 	}
-	std::string junk;
+	
-
+	EVBApp::~EVBApp() 
-	std::getline(input, junk);
-	input>>junk>>m_workspace;
-	input>>junk;
-	std::getline(input, junk);
-	std::getline(input, junk);
-	input>>junk>>m_mapfile;
-	input>>junk>>m_scalerfile;
-	input>>junk>>m_cutList;
-	input>>junk>>m_ZT>>junk>>m_AT;
-	input>>junk>>m_ZP>>junk>>m_AP;
-	input>>junk>>m_ZE>>junk>>m_AE;
-	input>>junk>>m_B;
-	input>>junk>>m_BKE;
-	input>>junk>>m_Theta;
-	input>>junk;
-	std::getline(input, junk);
-	std::getline(input, junk);
-	input>>junk>>m_shiftfile;
-	input>>junk>>m_SlowWindow;
-	input>>junk>>m_FastWindowIonCh;
-	input>>junk>>m_FastWindowSABRE;
-	input>>junk;
-	std::getline(input, junk);
-	std::getline(input, junk);
-	input>>junk>>m_rmin;
-	input>>junk>>m_rmax;
-
-	input.close();
-
-	std::cout<<"Completed."<<std::endl;
-
-	return true;
-}
-
-void EVBApp::WriteConfigFile(const std::string& fullpath) 
-{
-
-	std::cout<<"Writing out configuration to file: "<<fullpath<<std::endl;
-	std::ofstream output(fullpath);
-	if(!output.is_open()) 
 	{
-		std::cout<<"Write failed! Unable to open output file!"<<std::endl;
-		return;
 	}
-
+	
-	output<<"-------Data Location----------"<<std::endl;
+	bool EVBApp::ReadConfigFile(const std::string& fullpath) 
-	output<<"WorkspaceDirectory: "<<m_workspace<<std::endl;
-	output<<"-------------------------------"<<std::endl;
-	output<<"------Experimental Inputs------"<<std::endl;
-	output<<"ChannelMapFile: "<<m_mapfile<<std::endl;
-	output<<"ScalerFile: "<<m_scalerfile<<std::endl;
-	output<<"CutListFile: "<<m_cutList<<std::endl;
-	output<<"ZT: "<<m_ZT<<std::endl;
-	output<<"AT: "<<m_AT<<std::endl;
-	output<<"ZP: "<<m_ZP<<std::endl;
-	output<<"AP: "<<m_AP<<std::endl;
-	output<<"ZE: "<<m_ZE<<std::endl;
-	output<<"AE: "<<m_AE<<std::endl;
-	output<<"BField(G): "<<m_B<<std::endl;
-	output<<"BeamKE(MeV): "<<m_BKE<<std::endl;
-	output<<"Theta(deg): "<<m_Theta<<std::endl;
-	output<<"-------------------------------"<<std::endl;
-	output<<"-------Timing Information------"<<std::endl;
-	output<<"BoardOffsetFile: "<<m_shiftfile<<std::endl;
-	output<<"SlowCoincidenceWindow(ps): "<<m_SlowWindow<<std::endl;
-	output<<"FastCoincidenceWindow_IonCh(ps): "<<m_FastWindowIonCh<<std::endl;
-	output<<"FastCoincidenceWindow_SABRE(ps): "<<m_FastWindowSABRE<<std::endl;
-	output<<"-------------------------------"<<std::endl;
-	output<<"--------Run Information--------"<<std::endl;
-	output<<"MinRun: "<<m_rmin<<std::endl;
-	output<<"MaxRun: "<<m_rmax<<std::endl;
-	output<<"-------------------------------"<<std::endl;
-
-	output.close();
-
-	std::cout<<"Completed."<<std::endl;
-
-}
-
-void EVBApp::PlotHistograms() 
-{
-	std::string analyze_dir = m_workspace+"/analyzed/";
-	std::string plot_file = m_workspace+"/histograms/run_"+std::to_string(m_rmin)+"_"+std::to_string(m_rmax)+".root";
-	SFPPlotter grammer;
-	grammer.ApplyCutlist(m_cutList);
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Generating a histogram file from analyzed files"<<std::endl;
-	std::cout<<"Analyzed directory: "<<analyze_dir<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
-	std::cout<<"Cut List File: "<<m_cutList<<std::endl;
-	std::cout<<"Histogram File: "<<plot_file<<std::endl;
-
-	if(m_pb) 
-		grammer.AttachProgressBar(m_pb);
-	grabber.SetSearchParams(analyze_dir, "", ".root", m_rmin, m_rmax);
-	if(grabber.GrabFilesInRange()) 
 	{
-		std::cout<<"Working...";
+		std::cout<<"Reading in configuration from file: "<<fullpath<<std::endl;
-		grammer.Run(grabber.GetFileList(), plot_file);
+		std::ifstream input(fullpath);
+		if(!input.is_open()) 
+		{
+			std::cout<<"Read failed! Unable to open input file!"<<std::endl;
+			return false;
+		}
+		std::string junk;
+	
+		std::getline(input, junk);
+		input>>junk>>m_workspace;
+		input>>junk;
+		std::getline(input, junk);
+		std::getline(input, junk);
+		input>>junk>>m_mapfile;
+		input>>junk>>m_scalerfile;
+		input>>junk>>m_cutList;
+		input>>junk>>m_ZT>>junk>>m_AT;
+		input>>junk>>m_ZP>>junk>>m_AP;
+		input>>junk>>m_ZE>>junk>>m_AE;
+		input>>junk>>m_B;
+		input>>junk>>m_BKE;
+		input>>junk>>m_Theta;
+		input>>junk;
+		std::getline(input, junk);
+		std::getline(input, junk);
+		input>>junk>>m_shiftfile;
+		input>>junk>>m_SlowWindow;
+		input>>junk>>m_FastWindowIonCh;
+		input>>junk>>m_FastWindowSABRE;
+		input>>junk;
+		std::getline(input, junk);
+		std::getline(input, junk);
+		input>>junk>>m_rmin;
+		input>>junk>>m_rmax;
+	
+		input.close();
+	
+		std::cout<<"Completed."<<std::endl;
+	
+		return true;
+	}
+	
+	void EVBApp::WriteConfigFile(const std::string& fullpath) 
+	{
+	
+		std::cout<<"Writing out configuration to file: "<<fullpath<<std::endl;
+		std::ofstream output(fullpath);
+		if(!output.is_open()) 
+		{
+			std::cout<<"Write failed! Unable to open output file!"<<std::endl;
+			return;
+		}
+	
+		output<<"-------Data Location----------"<<std::endl;
+		output<<"WorkspaceDirectory: "<<m_workspace<<std::endl;
+		output<<"-------------------------------"<<std::endl;
+		output<<"------Experimental Inputs------"<<std::endl;
+		output<<"ChannelMapFile: "<<m_mapfile<<std::endl;
+		output<<"ScalerFile: "<<m_scalerfile<<std::endl;
+		output<<"CutListFile: "<<m_cutList<<std::endl;
+		output<<"ZT: "<<m_ZT<<std::endl;
+		output<<"AT: "<<m_AT<<std::endl;
+		output<<"ZP: "<<m_ZP<<std::endl;
+		output<<"AP: "<<m_AP<<std::endl;
+		output<<"ZE: "<<m_ZE<<std::endl;
+		output<<"AE: "<<m_AE<<std::endl;
+		output<<"BField(G): "<<m_B<<std::endl;
+		output<<"BeamKE(MeV): "<<m_BKE<<std::endl;
+		output<<"Theta(deg): "<<m_Theta<<std::endl;
+		output<<"-------------------------------"<<std::endl;
+		output<<"-------Timing Information------"<<std::endl;
+		output<<"BoardOffsetFile: "<<m_shiftfile<<std::endl;
+		output<<"SlowCoincidenceWindow(ps): "<<m_SlowWindow<<std::endl;
+		output<<"FastCoincidenceWindow_IonCh(ps): "<<m_FastWindowIonCh<<std::endl;
+		output<<"FastCoincidenceWindow_SABRE(ps): "<<m_FastWindowSABRE<<std::endl;
+		output<<"-------------------------------"<<std::endl;
+		output<<"--------Run Information--------"<<std::endl;
+		output<<"MinRun: "<<m_rmin<<std::endl;
+		output<<"MaxRun: "<<m_rmax<<std::endl;
+		output<<"-------------------------------"<<std::endl;
+	
+		output.close();
+	
+		std::cout<<"Completed."<<std::endl;
+	
+	}
+	
+	void EVBApp::PlotHistograms() 
+	{
+		std::string analyze_dir = m_workspace+"/analyzed/";
+		std::string plot_file = m_workspace+"/histograms/run_"+std::to_string(m_rmin)+"_"+std::to_string(m_rmax)+".root";
+		SFPPlotter grammer;
+		grammer.ApplyCutlist(m_cutList);
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
+		std::cout<<"Generating a histogram file from analyzed files"<<std::endl;
+		std::cout<<"Analyzed directory: "<<analyze_dir<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+		std::cout<<"Cut List File: "<<m_cutList<<std::endl;
+		std::cout<<"Histogram File: "<<plot_file<<std::endl;
+	
+		if(m_pb) 
+			grammer.AttachProgressBar(m_pb);
+		grabber.SetSearchParams(analyze_dir, "", ".root", m_rmin, m_rmax);
+		if(grabber.GrabFilesInRange()) 
+		{
+			std::cout<<"Working...";
+			grammer.Run(grabber.GetFileList(), plot_file);
+			std::cout<<" Complete."<<std::endl;
+		} 
+		else 
+		{
+			std::cout<<"Unable to find files at PlotHistograms"<<std::endl;
+		}
+		std::cout<<"-------------------------------------------"<<std::endl;
+	
+	}
+	
+	void EVBApp::Convert2RawRoot() 
+	{
+		std::string rawroot_dir = m_workspace+"/raw_root/";
+		std::string unpack_dir = m_workspace+"/temp_binary/";
+		std::string binary_dir = m_workspace+"/raw_binary/";
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
+		std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
+		std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
+		std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
+		std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+		
+	
+		grabber.SetSearchParams(binary_dir, "", ".tar.gz",0,1000);
+	
+		std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
+	
+		std::string rawfile, binfile;
+		std::string unpack_command, wipe_command;
+	
+		CompassRun converter(unpack_dir);
+		converter.SetShiftMap(m_shiftfile);
+		converter.SetScalerInput(m_scalerfile);
+		if(m_pb)
+			converter.AttachProgressBar(m_pb);
+	
+		std::cout<<"Beginning conversion..."<<std::endl;
+	
+		for(int i=m_rmin; i<=m_rmax; i++) 
+		{
+			binfile = grabber.GrabFile(i);
+			if(binfile == "") 
+				continue;
+			converter.SetRunNumber(i);
+			std::cout<<"Converting file: "<<binfile<<std::endl;
+	
+			rawfile = rawroot_dir + "compass_run_"+ std::to_string(i) + ".root";
+			unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+			wipe_command = "rm -r "+unpack_dir+"*.bin";
+	
+			system(unpack_command.c_str());
+			converter.Convert2RawRoot(rawfile);
+			system(wipe_command.c_str());
+	
+		}
+		std::cout<<std::endl<<"Conversion complete."<<std::endl;
+		std::cout<<"-------------------------------------------"<<std::endl;
+	
+	}
+	
+	void EVBApp::MergeROOTFiles() 
+	{
+		std::string merge_file = m_workspace+"/merged/run_"+std::to_string(m_rmin)+"_"+std::to_string(m_rmax)+".root";
+		std::string file_dir = m_workspace+"/analyzed/";
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
+		std::cout<<"Merging ROOT files into single ROOT file"<<std::endl;
+		std::cout<<"Workspace directory: "<<m_workspace<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+		std::cout<<"Output file: "<<merge_file<<std::endl;
+		std::string prefix = "";
+		std::string suffix = ".root";
+		grabber.SetSearchParams(file_dir, prefix, suffix,m_rmin,m_rmax);
+		std::cout<<"Beginning the merge...";
+		if(!grabber.Merge_TChain(merge_file)) 
+		{
+			std::cout<<"Unable to find files at MergeROOTFiles"<<std::endl;
+			return;
+		}
 		std::cout<<" Complete."<<std::endl;
-	} 
+		std::cout<<"-------------------------------------------"<<std::endl;
-	else 
-	{
-		std::cout<<"Unable to find files at PlotHistograms"<<std::endl;
 	}
-	std::cout<<"-------------------------------------------"<<std::endl;
-
-}
-
-void EVBApp::Convert2RawRoot() 
-{
-	std::string rawroot_dir = m_workspace+"/raw_root/";
-	std::string unpack_dir = m_workspace+"/temp_binary/";
-	std::string binary_dir = m_workspace+"/raw_binary/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-	std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
 	
-
+	void EVBApp::Convert2SortedRoot() 
-	grabber.SetSearchParams(binary_dir, "", ".tar.gz",0,1000);
-
-	std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
-
-	std::string rawfile, binfile;
-	std::string unpack_command, wipe_command;
-
-	CompassRun converter(unpack_dir);
-	converter.SetShiftMap(m_shiftfile);
-	converter.SetScalerInput(m_scalerfile);
-	if(m_pb)
-		converter.AttachProgressBar(m_pb);
-
-	std::cout<<"Beginning conversion..."<<std::endl;
-
-	for(int i=m_rmin; i<=m_rmax; i++) 
 	{
-		binfile = grabber.GrabFile(i);
+		std::string sortroot_dir = m_workspace+"/sorted/";
-		if(binfile == "") 
+		std::string unpack_dir = m_workspace+"/temp_binary/";
-			continue;
+		std::string binary_dir = m_workspace+"/raw_binary/";
-		converter.SetRunNumber(i);
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-		std::cout<<"Converting file: "<<binfile<<std::endl;
+		std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-
+		std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-		rawfile = rawroot_dir + "compass_run_"+ std::to_string(i) + ".root";
+		std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-		unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+		std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-		wipe_command = "rm -r "+unpack_dir+"*.bin";
+		std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
-
+		std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
-		system(unpack_command.c_str());
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
-		converter.Convert2RawRoot(rawfile);
-		system(wipe_command.c_str());
-
-	}
-	std::cout<<std::endl<<"Conversion complete."<<std::endl;
-	std::cout<<"-------------------------------------------"<<std::endl;
-
-}
-
-void EVBApp::MergeROOTFiles() 
-{
-	std::string merge_file = m_workspace+"/merged/run_"+std::to_string(m_rmin)+"_"+std::to_string(m_rmax)+".root";
-	std::string file_dir = m_workspace+"/analyzed/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Merging ROOT files into single ROOT file"<<std::endl;
-	std::cout<<"Workspace directory: "<<m_workspace<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
-	std::cout<<"Output file: "<<merge_file<<std::endl;
-	std::string prefix = "";
-	std::string suffix = ".root";
-	grabber.SetSearchParams(file_dir, prefix, suffix,m_rmin,m_rmax);
-	std::cout<<"Beginning the merge...";
-	if(!grabber.Merge_TChain(merge_file)) 
-	{
-		std::cout<<"Unable to find files at MergeROOTFiles"<<std::endl;
-		return;
-	}
-	std::cout<<" Complete."<<std::endl;
-	std::cout<<"-------------------------------------------"<<std::endl;
-}
-
-void EVBApp::Convert2SortedRoot() 
-{
-	std::string sortroot_dir = m_workspace+"/sorted/";
-	std::string unpack_dir = m_workspace+"/temp_binary/";
-	std::string binary_dir = m_workspace+"/raw_binary/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-	std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-	std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
-	std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
-
-	grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
-
-	std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
-
-	std::string sortfile, binfile;
-	std::string unpack_command, wipe_command;
-
-	CompassRun converter(unpack_dir);
-	converter.SetShiftMap(m_shiftfile);
-	converter.SetScalerInput(m_scalerfile);
-	if(m_pb) 
-		converter.AttachProgressBar(m_pb);
-
-	std::cout<<"Beginning conversion..."<<std::endl;
-
-	for(int i=m_rmin; i<= m_rmax; i++) 
-	{
-		binfile = grabber.GrabFile(i);
-		if(binfile == "") 
-			continue;
-		converter.SetRunNumber(i);
-		std::cout<<"Converting file: "<<binfile<<std::endl;
-
-		sortfile = sortroot_dir +"run_"+std::to_string(i)+ ".root";
-		unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
-		wipe_command = "rm -r "+unpack_dir+"*.bin";
-
-		system(unpack_command.c_str());
-		converter.Convert2SortedRoot(sortfile, m_mapfile, m_SlowWindow);
-		system(wipe_command.c_str());
-
-	}
-	std::cout<<std::endl<<"Conversion complete."<<std::endl;
-	std::cout<<"-------------------------------------------"<<std::endl;
-}
-
-void EVBApp::Convert2FastSortedRoot() {
-	std::string sortroot_dir = m_workspace+"/fast/";
-	std::string unpack_dir = m_workspace+"/temp_binary/";
-	std::string binary_dir = m_workspace+"/raw_binary/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-	std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-	std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
-	std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
-
-	grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
-
-	std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
-
-	std::string sortfile, binfile;
-	std::string unpack_command, wipe_command;
-
-	CompassRun converter(unpack_dir);
-	converter.SetShiftMap(m_shiftfile);
-	converter.SetScalerInput(m_scalerfile);
-	if(m_pb) 
-		converter.AttachProgressBar(m_pb);
-
-	std::cout<<"Beginning conversion..."<<std::endl;
-
-	for(int i=m_rmin; i<=m_rmax; i++) 
-	{
-		binfile = grabber.GrabFile(i);
-		if(binfile == "") 
-			continue;
-		converter.SetRunNumber(i);
-		std::cout<<"Converting file: "<<binfile<<std::endl;
-
-		sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
-		unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
-		wipe_command = "rm -r "+unpack_dir+"*.bin";
-
-		system(unpack_command.c_str());
-		converter.Convert2FastSortedRoot(sortfile, m_mapfile, m_SlowWindow, m_FastWindowSABRE, m_FastWindowIonCh);
-		system(wipe_command.c_str());
-
-	}
-	std::cout<<std::endl<<"Conversion complete."<<std::endl;
-	std::cout<<"-------------------------------------------"<<std::endl;
-}
-
-void EVBApp::Convert2SlowAnalyzedRoot() {
-	std::string sortroot_dir = m_workspace+"/analyzed/";
-	std::string unpack_dir = m_workspace+"/temp_binary/";
-	std::string binary_dir = m_workspace+"/raw_binary/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-	std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-	std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
-	std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
 	
-	grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin, m_rmax);
+		grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
-	std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
-
-	std::string sortfile, binfile;
-	std::string unpack_command, wipe_command;
-
-	CompassRun converter(unpack_dir);
-	converter.SetShiftMap(m_shiftfile);
-	converter.SetScalerInput(m_scalerfile);
-	if(m_pb) 
-		converter.AttachProgressBar(m_pb);
-
-	std::cout<<"Beginning conversion..."<<std::endl;
-
-	for(int i=m_rmin; i<=m_rmax; i++) 
-	{
-		binfile = grabber.GrabFile(i);
-		if(binfile == "") 
-			continue;
-		converter.SetRunNumber(i);
-		std::cout<<"Converting file: "<<binfile<<std::endl;
-
-		sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
-		unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
-		wipe_command = "rm -r "+unpack_dir+"*.bin";
-
-		system(unpack_command.c_str());
-		converter.Convert2SlowAnalyzedRoot(sortfile, m_mapfile, m_SlowWindow, m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_BKE, m_B, m_Theta);
-		system(wipe_command.c_str());
-
-	}
-	std::cout<<std::endl<<"Conversion complete."<<std::endl;
-	std::cout<<"-------------------------------------------"<<std::endl;
-}
-
-void EVBApp::Convert2FastAnalyzedRoot() 
-{
-	std::string sortroot_dir = m_workspace+"/analyzed/";
-	std::string unpack_dir = m_workspace+"/temp_binary/";
-	std::string binary_dir = m_workspace+"/raw_binary/";
-	std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-	std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-	std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-	std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
-	std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
-	std::cout<<"Fast Ion Chamber Coincidence Window(ps): "<<m_FastWindowIonCh<<std::endl;
-	std::cout<<"Fast SABRE Coincidence Window(ps): "<<m_FastWindowSABRE<<std::endl;
-	std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
 	
-	grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
+		std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
-
+	
-	std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
+		std::string sortfile, binfile;
-
+		std::string unpack_command, wipe_command;
-	std::string sortfile, binfile;
+	
-	std::string unpack_command, wipe_command;
+		CompassRun converter(unpack_dir);
-
+		converter.SetShiftMap(m_shiftfile);
-	CompassRun converter(unpack_dir);
+		converter.SetScalerInput(m_scalerfile);
-	converter.SetShiftMap(m_shiftfile);
+		if(m_pb) 
-	converter.SetScalerInput(m_scalerfile);
+			converter.AttachProgressBar(m_pb);
-	if(m_pb) 
+	
-		converter.AttachProgressBar(m_pb);
+		std::cout<<"Beginning conversion..."<<std::endl;
-
+	
-	std::cout<<"Beginning conversion..."<<std::endl;
+		for(int i=m_rmin; i<= m_rmax; i++) 
-
+		{
-	for(int i=m_rmin; i<=m_rmax; i++) 
+			binfile = grabber.GrabFile(i);
-	{
+			if(binfile == "") 
-		binfile = grabber.GrabFile(i);
+				continue;
-		if(binfile == "") 
+			converter.SetRunNumber(i);
-			continue;
+			std::cout<<"Converting file: "<<binfile<<std::endl;
-		converter.SetRunNumber(i);
+	
-		std::cout<<"Converting file: "<<binfile<<std::endl;
+			sortfile = sortroot_dir +"run_"+std::to_string(i)+ ".root";
-
+			unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
-		sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
+			wipe_command = "rm -r "+unpack_dir+"*.bin";
-		unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+	
-		wipe_command = "rm -r "+unpack_dir+"*.bin";
+			system(unpack_command.c_str());
-
+			converter.Convert2SortedRoot(sortfile, m_mapfile, m_SlowWindow);
-		system(unpack_command.c_str());
+			system(wipe_command.c_str());
-		converter.Convert2FastAnalyzedRoot(sortfile, m_mapfile, m_SlowWindow, m_FastWindowSABRE, m_FastWindowIonCh, m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_BKE, m_B, m_Theta);
+	
-		system(wipe_command.c_str());
+		}
-
+		std::cout<<std::endl<<"Conversion complete."<<std::endl;
+		std::cout<<"-------------------------------------------"<<std::endl;
 	}
-	std::cout<<std::endl<<"Conversion complete."<<std::endl;
+	
-	std::cout<<"-------------------------------------------"<<std::endl;
+	void EVBApp::Convert2FastSortedRoot() {
-}
+		std::string sortroot_dir = m_workspace+"/fast/";
-
+		std::string unpack_dir = m_workspace+"/temp_binary/";
-bool EVBApp::SetKinematicParameters(int zt, int at, int zp, int ap, int ze, int ae, double b, double theta, double bke) 
+		std::string binary_dir = m_workspace+"/raw_binary/";
-{
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
-
+		std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
-	if((at + ap - ae) < 0 || (zt + zp - ze) < 0) 
+		std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
-	{
+		std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
-		std::cout<<"Invalid Parameters at SetKinematicParameters"<<std::endl;
+		std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
-		return false;
+		std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
+		std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+	
+		grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
+	
+		std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
+	
+		std::string sortfile, binfile;
+		std::string unpack_command, wipe_command;
+	
+		CompassRun converter(unpack_dir);
+		converter.SetShiftMap(m_shiftfile);
+		converter.SetScalerInput(m_scalerfile);
+		if(m_pb) 
+			converter.AttachProgressBar(m_pb);
+	
+		std::cout<<"Beginning conversion..."<<std::endl;
+	
+		for(int i=m_rmin; i<=m_rmax; i++) 
+		{
+			binfile = grabber.GrabFile(i);
+			if(binfile == "") 
+				continue;
+			converter.SetRunNumber(i);
+			std::cout<<"Converting file: "<<binfile<<std::endl;
+	
+			sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
+			unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+			wipe_command = "rm -r "+unpack_dir+"*.bin";
+	
+			system(unpack_command.c_str());
+			converter.Convert2FastSortedRoot(sortfile, m_mapfile, m_SlowWindow, m_FastWindowSABRE, m_FastWindowIonCh);
+			system(wipe_command.c_str());
+	
+		}
+		std::cout<<std::endl<<"Conversion complete."<<std::endl;
+		std::cout<<"-------------------------------------------"<<std::endl;
+	}
+	
+	void EVBApp::Convert2SlowAnalyzedRoot() {
+		std::string sortroot_dir = m_workspace+"/analyzed/";
+		std::string unpack_dir = m_workspace+"/temp_binary/";
+		std::string binary_dir = m_workspace+"/raw_binary/";
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
+		std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
+		std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
+		std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
+		std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
+		std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
+		std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+		
+		grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin, m_rmax);
+		std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
+	
+		std::string sortfile, binfile;
+		std::string unpack_command, wipe_command;
+	
+		CompassRun converter(unpack_dir);
+		converter.SetShiftMap(m_shiftfile);
+		converter.SetScalerInput(m_scalerfile);
+		if(m_pb) 
+			converter.AttachProgressBar(m_pb);
+	
+		std::cout<<"Beginning conversion..."<<std::endl;
+	
+		for(int i=m_rmin; i<=m_rmax; i++) 
+		{
+			binfile = grabber.GrabFile(i);
+			if(binfile == "") 
+				continue;
+			converter.SetRunNumber(i);
+			std::cout<<"Converting file: "<<binfile<<std::endl;
+	
+			sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
+			unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+			wipe_command = "rm -r "+unpack_dir+"*.bin";
+	
+			system(unpack_command.c_str());
+			converter.Convert2SlowAnalyzedRoot(sortfile, m_mapfile, m_SlowWindow, m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_BKE, m_B, m_Theta);
+			system(wipe_command.c_str());
+	
+		}
+		std::cout<<std::endl<<"Conversion complete."<<std::endl;
+		std::cout<<"-------------------------------------------"<<std::endl;
+	}
+	
+	void EVBApp::Convert2FastAnalyzedRoot() 
+	{
+		std::string sortroot_dir = m_workspace+"/analyzed/";
+		std::string unpack_dir = m_workspace+"/temp_binary/";
+		std::string binary_dir = m_workspace+"/raw_binary/";
+		std::cout<<"-------------GWM Event Builder-------------"<<std::endl;
+		std::cout<<"Converting Binary file Archive to ROOT file"<<std::endl;
+		std::cout<<"Binary Archive Directory: "<<binary_dir<<std::endl;
+		std::cout<<"Temporary Unpack Directory: "<<unpack_dir<<std::endl;
+		std::cout<<"Timestamp Shift File: "<<m_shiftfile<<std::endl;
+		std::cout<<"Channel Map File: "<<m_mapfile<<std::endl;
+		std::cout<<"Slow Coincidence Window(ps): "<<m_SlowWindow<<std::endl;
+		std::cout<<"Fast Ion Chamber Coincidence Window(ps): "<<m_FastWindowIonCh<<std::endl;
+		std::cout<<"Fast SABRE Coincidence Window(ps): "<<m_FastWindowSABRE<<std::endl;
+		std::cout<<"Min Run: "<<m_rmin<<" Max Run: "<<m_rmax<<std::endl;
+		
+		grabber.SetSearchParams(binary_dir,"",".tar.gz",m_rmin,m_rmax);
+	
+		std::cout<<"Workspace Directory: "<<m_workspace<<std::endl;
+	
+		std::string sortfile, binfile;
+		std::string unpack_command, wipe_command;
+	
+		CompassRun converter(unpack_dir);
+		converter.SetShiftMap(m_shiftfile);
+		converter.SetScalerInput(m_scalerfile);
+		if(m_pb) 
+			converter.AttachProgressBar(m_pb);
+	
+		std::cout<<"Beginning conversion..."<<std::endl;
+	
+		for(int i=m_rmin; i<=m_rmax; i++) 
+		{
+			binfile = grabber.GrabFile(i);
+			if(binfile == "") 
+				continue;
+			converter.SetRunNumber(i);
+			std::cout<<"Converting file: "<<binfile<<std::endl;
+	
+			sortfile = sortroot_dir + "run_" + std::to_string(i) + ".root";
+			unpack_command = "tar -xzf "+binfile+" --directory "+unpack_dir;
+			wipe_command = "rm -r "+unpack_dir+"*.bin";
+	
+			system(unpack_command.c_str());
+			converter.Convert2FastAnalyzedRoot(sortfile, m_mapfile, m_SlowWindow, m_FastWindowSABRE, m_FastWindowIonCh, m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_BKE, m_B, m_Theta);
+			system(wipe_command.c_str());
+	
+		}
+		std::cout<<std::endl<<"Conversion complete."<<std::endl;
+		std::cout<<"-------------------------------------------"<<std::endl;
+	}
+	
+	bool EVBApp::SetKinematicParameters(int zt, int at, int zp, int ap, int ze, int ae, double b, double theta, double bke) 
+	{
+	
+		if((at + ap - ae) < 0 || (zt + zp - ze) < 0) 
+		{
+			std::cout<<"Invalid Parameters at SetKinematicParameters"<<std::endl;
+			return false;
+		}
+		m_ZT = zt; m_AT = at; m_ZP = zp; m_AP = ap; m_ZE = ze; m_AE = ae;
+		m_B = b; m_Theta = theta; m_BKE = bke;
+	
+		m_ZR = (zt + zp - ze);
+		m_AR = (at + ap - ae);
+	
+		return true;
 	}
-	m_ZT = zt; m_AT = at; m_ZP = zp; m_AP = ap; m_ZE = ze; m_AE = ae;
-	m_B = b; m_Theta = theta; m_BKE = bke;
 
-	m_ZR = (zt + zp - ze);
+}
-	m_AR = (at + ap - ae);
-
-	return true;
-}

src/evb/EVBApp.h

@@ -12,87 +12,90 @@
 #include "RunCollector.h"
 #include <TGProgressBar.h>
 
-class EVBApp {
+namespace EventBuilder {
-public:
+	
-	EVBApp();
+	class EVBApp {
-	~EVBApp();
+	public:
-
+		EVBApp();
-	bool ReadConfigFile(const std::string& filename);
+		~EVBApp();
-	void WriteConfigFile(const std::string& filename);
+	
-
+		bool ReadConfigFile(const std::string& filename);
-	void PlotHistograms();
+		void WriteConfigFile(const std::string& filename);
-	void MergeROOTFiles();
+	
-	void Convert2SortedRoot();
+		void PlotHistograms();
-	void Convert2FastSortedRoot();
+		void MergeROOTFiles();
-	void Convert2RawRoot();
+		void Convert2SortedRoot();
-	void Convert2SlowAnalyzedRoot();
+		void Convert2FastSortedRoot();
-	void Convert2FastAnalyzedRoot();
+		void Convert2RawRoot();
-
+		void Convert2SlowAnalyzedRoot();
-	inline void SetRunRange(int rmin, int rmax) { m_rmin = rmin; m_rmax = rmax; };
+		void Convert2FastAnalyzedRoot();
-	inline void SetWorkDirectory(const std::string& fullpath) { m_workspace = fullpath; };
+	
-	inline void SetChannelMap(const std::string& name) { m_mapfile = name; };
+		inline void SetRunRange(int rmin, int rmax) { m_rmin = rmin; m_rmax = rmax; };
-	inline void SetBoardShiftFile(const std::string& name) { m_shiftfile = name; };
+		inline void SetWorkDirectory(const std::string& fullpath) { m_workspace = fullpath; };
-	inline void SetSlowCoincidenceWindow(double window) { m_SlowWindow = window; };
+		inline void SetChannelMap(const std::string& name) { m_mapfile = name; };
-	inline void SetFastWindowIonChamber(double window) { m_FastWindowIonCh = window; };
+		inline void SetBoardShiftFile(const std::string& name) { m_shiftfile = name; };
-	inline void SetFastWindowSABRE(double window) { m_FastWindowSABRE = window; };
+		inline void SetSlowCoincidenceWindow(double window) { m_SlowWindow = window; };
-	inline void SetCutList(const std::string& name) { m_cutList = name; };
+		inline void SetFastWindowIonChamber(double window) { m_FastWindowIonCh = window; };
-	inline void SetScalerFile(const std::string& fullpath) { m_scalerfile = fullpath; };
+		inline void SetFastWindowSABRE(double window) { m_FastWindowSABRE = window; };
-	bool SetKinematicParameters(int zt, int at, int zp, int ap, int ze, int ae, double b, double theta, double bke);
+		inline void SetCutList(const std::string& name) { m_cutList = name; };
-
+		inline void SetScalerFile(const std::string& fullpath) { m_scalerfile = fullpath; };
-	inline int GetRunMin() const {return m_rmin;}
+		bool SetKinematicParameters(int zt, int at, int zp, int ap, int ze, int ae, double b, double theta, double bke);
-	inline int GetRunMax() const {return m_rmax;}
+	
-	inline std::string GetWorkDirectory() const {return m_workspace;}
+		inline int GetRunMin() const {return m_rmin;}
-	inline int GetTargetZ() const {return m_ZT;}
+		inline int GetRunMax() const {return m_rmax;}
-	inline int GetTargetA() const {return m_AT;}
+		inline std::string GetWorkDirectory() const {return m_workspace;}
-	inline int GetProjectileZ() const {return m_ZP;}
+		inline int GetTargetZ() const {return m_ZT;}
-	inline int GetProjectileA() const {return m_AP;}
+		inline int GetTargetA() const {return m_AT;}
-	inline int GetEjectileZ() const {return m_ZE;}
+		inline int GetProjectileZ() const {return m_ZP;}
-	inline int GetEjectileA() const {return m_AE;}
+		inline int GetProjectileA() const {return m_AP;}
-	inline int GetResidualZ() const {return m_ZR;}
+		inline int GetEjectileZ() const {return m_ZE;}
-	inline int GetResidualA() const {return m_AR;}
+		inline int GetEjectileA() const {return m_AE;}
-	inline double GetBField() const {return m_B;}
+		inline int GetResidualZ() const {return m_ZR;}
-	inline double GetBeamKE() const {return m_BKE;}
+		inline int GetResidualA() const {return m_AR;}
-	inline double GetTheta() const {return m_Theta;}
+		inline double GetBField() const {return m_B;}
-	inline double GetSlowCoincidenceWindow() const { return m_SlowWindow; }
+		inline double GetBeamKE() const {return m_BKE;}
-	inline double GetFastWindowIonChamber() const { return m_FastWindowIonCh; }
+		inline double GetTheta() const {return m_Theta;}
-	inline double GetFastWindowSABRE() const { return m_FastWindowSABRE; }
+		inline double GetSlowCoincidenceWindow() const { return m_SlowWindow; }
-	inline std::string GetChannelMap() const { return m_mapfile; }
+		inline double GetFastWindowIonChamber() const { return m_FastWindowIonCh; }
-	inline std::string GetBoardShiftFile() const { return m_shiftfile; }
+		inline double GetFastWindowSABRE() const { return m_FastWindowSABRE; }
-	inline std::string GetCutList() const { return m_cutList; }
+		inline std::string GetChannelMap() const { return m_mapfile; }
-	inline std::string GetScalerFile() const { return m_scalerfile; }
+		inline std::string GetBoardShiftFile() const { return m_shiftfile; }
-
+		inline std::string GetCutList() const { return m_cutList; }
-	inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
+		inline std::string GetScalerFile() const { return m_scalerfile; }
-
+	
-	enum Operation 
+		inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
-	{
+	
-		Convert,
+		enum Operation 
-		ConvertSlow,
+		{
-		ConvertSlowA,
+			Convert,
-		ConvertFast,
+			ConvertSlow,
-		ConvertFastA,
+			ConvertSlowA,
-		Merge,
+			ConvertFast,
-		Plot
+			ConvertFastA,
+			Merge,
+			Plot
+		};
+	
+	private:
+	
+		int m_rmin, m_rmax;
+		int m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_ZR, m_AR;
+		double m_B, m_Theta, m_BKE;
+	
+		std::string m_workspace;
+		std::string m_mapfile, m_shiftfile;
+		std::string m_cutList;
+		std::string m_scalerfile;
+	
+		double m_SlowWindow;
+		double m_FastWindowIonCh;
+		double m_FastWindowSABRE;
+	
+		RunCollector grabber;
+	
+		TGProgressBar* m_pb;
+	
 	};
 
-private:
+}
-
-	int m_rmin, m_rmax;
-	int m_ZT, m_AT, m_ZP, m_AP, m_ZE, m_AE, m_ZR, m_AR;
-	double m_B, m_Theta, m_BKE;
-
-	std::string m_workspace;
-	std::string m_mapfile, m_shiftfile;
-	std::string m_cutList;
-	std::string m_scalerfile;
-
-	double m_SlowWindow;
-	double m_FastWindowIonCh;
-	double m_FastWindowSABRE;
-
-	RunCollector grabber;
-
-	TGProgressBar* m_pb;
-
-};
-
 #endif

src/evb/FP_kinematics.cpp

@@ -36,70 +36,73 @@
 #include "MassLookup.h"
 #include "FP_kinematics.h"
 
-//requires (Z,A) for T, P, and E, as well as energy of P,
+namespace EventBuilder {
-// spectrograph angle of interest, and field value
-double Delta_Z(int ZT, int AT, int ZP, int AP, int ZE, int AE,
-	       double EP, double angle, double B) 
-{
 
-	/* CONSTANTS */
+	//requires (Z,A) for T, P, and E, as well as energy of P,
-	const double UTOMEV = 931.4940954; //MeV per u;
+	// spectrograph angle of interest, and field value
-	const double MEVTOJ = 1.60218E-13; //J per MeV
+	double Delta_Z(int ZT, int AT, int ZP, int AP, int ZE, int AE,
-	const double RESTMASS_ELECTRON = 0.000548579909; //amu
+		       double EP, double angle, double B) 
-	const double UNIT_CHARGE = 1.602E-19; //Coulombs
-	const double C = 2.9979E8; //m/s
-
-	/* SESPS-SPECIFIC */
-	const double DISP = 1.96; //dispersion (x/rho)
-	const double MAG = 0.39; //magnification in x
-	const double DEGTORAD = M_PI/180.;
-
-	int ZR = ZT + ZP - ZE, AR = AT + AP - AE;
-	double EE=0; //ejectile energy
-
-	double MT=0, MP=0, ME=0, MR=0; //masses (MeV)
-
-	B /= 10000; //convert to tesla
-	angle *= DEGTORAD;
-
-	MT = MASS.FindMass(ZT, AT) - ZT*RESTMASS_ELECTRON*UTOMEV;
-	MP = MASS.FindMass(ZP, AP) - ZP*RESTMASS_ELECTRON*UTOMEV;
-	ME = MASS.FindMass(ZE, AE) - ZE*RESTMASS_ELECTRON*UTOMEV;
-	MR = MASS.FindMass(ZR, AR) - ZR*RESTMASS_ELECTRON*UTOMEV;
-	
-	if (MT*MP*ME*MR == 0) 
 	{
-		std::cerr << "***WARNING: error loading one or more masses; returning 0\n";
-		return 0;
-	}
-
-	double Q = MT + MP - ME - MR; //Q-value
 	
-	//kinematics a la Iliadis p.590
+		/* CONSTANTS */
-	double term1 = sqrt(MP*ME*EP)/(ME + MR)*cos(angle);
+		const double UTOMEV = 931.4940954; //MeV per u;
-	double term2 = (EP*(MR - MP) + MR*Q)/(ME + MR);
+		const double MEVTOJ = 1.60218E-13; //J per MeV
-
+		const double RESTMASS_ELECTRON = 0.000548579909; //amu
-	EE = term1 + sqrt(term1*term1 + term2);
+		const double UNIT_CHARGE = 1.602E-19; //Coulombs
-	EE *= EE;
+		const double C = 2.9979E8; //m/s
-
+	
-	//momentum
+		/* SESPS-SPECIFIC */
-	double PE = sqrt(EE*(EE+2*ME));
+		const double DISP = 1.96; //dispersion (x/rho)
-
+		const double MAG = 0.39; //magnification in x
-	//calculate rho from B a la B*rho = (proj. momentum)/(proj. charge)
+		const double DEGTORAD = M_PI/180.;
-	double rho = (PE*MEVTOJ)/(ZE*UNIT_CHARGE*C*B)*100; //in cm
+	
-
+		int ZR = ZT + ZP - ZE, AR = AT + AP - AE;
-	double K;
+		double EE=0; //ejectile energy
-
+	
-	K  = sqrt(MP*ME*EP/EE);
+		double MT=0, MP=0, ME=0, MR=0; //masses (MeV)
-	K *= sin(angle);
+	
-
+		B /= 10000; //convert to tesla
-	double denom = ME + MR - sqrt(MP*ME*EP/EE)*cos(angle);
+		angle *= DEGTORAD;
-
+	
-	K /= denom;
+		MT = MASS.FindMass(ZT, AT) - ZT*RESTMASS_ELECTRON*UTOMEV;
-	std::cout<<"Delta Z= "<<-1*rho*DISP*MAG*K<<std::endl;
+		MP = MASS.FindMass(ZP, AP) - ZP*RESTMASS_ELECTRON*UTOMEV;
-	return -1*rho*DISP*MAG*K; //delta-Z in cm
+		ME = MASS.FindMass(ZE, AE) - ZE*RESTMASS_ELECTRON*UTOMEV;
+		MR = MASS.FindMass(ZR, AR) - ZR*RESTMASS_ELECTRON*UTOMEV;
+		
+		if (MT*MP*ME*MR == 0) 
+		{
+			std::cerr << "***WARNING: error loading one or more masses; returning 0\n";
+			return 0;
+		}
+	
+		double Q = MT + MP - ME - MR; //Q-value
+		
+		//kinematics a la Iliadis p.590
+		double term1 = sqrt(MP*ME*EP)/(ME + MR)*cos(angle);
+		double term2 = (EP*(MR - MP) + MR*Q)/(ME + MR);
+	
+		EE = term1 + sqrt(term1*term1 + term2);
+		EE *= EE;
+	
+		//momentum
+		double PE = sqrt(EE*(EE+2*ME));
+	
+		//calculate rho from B a la B*rho = (proj. momentum)/(proj. charge)
+		double rho = (PE*MEVTOJ)/(ZE*UNIT_CHARGE*C*B)*100; //in cm
+	
+		double K;
+	
+		K  = sqrt(MP*ME*EP/EE);
+		K *= sin(angle);
+	
+		double denom = ME + MR - sqrt(MP*ME*EP/EE)*cos(angle);
+	
+		K /= denom;
+		std::cout<<"Delta Z= "<<-1*rho*DISP*MAG*K<<std::endl;
+		return -1*rho*DISP*MAG*K; //delta-Z in cm
+	
+	}
+	
+	double Wire_Dist() {return 4.28625;} //cm
 
 }
-
-double Wire_Dist() {return 4.28625;} //cm
-

src/evb/FP_kinematics.h

@@ -32,11 +32,15 @@
 #ifndef FP_KINEMATICS
 #define FP_KINEMATICS
 
-//requires (Z,A) for T, P, and E, as well as energy of P,
+namespace EventBuilder {
-// spectrograph angle of interest, and field value
-double Delta_Z(int ZT, int AT, int ZP, int AP, int ZE, int AE,
-	       double EP, double angle, double B); 
 
-double Wire_Dist();
+     //requires (Z,A) for T, P, and E, as well as energy of P,
+     // spectrograph angle of interest, and field value
+     double Delta_Z(int ZT, int AT, int ZP, int AP, int ZE, int AE,
+     	       double EP, double angle, double B); 
+     
+     double Wire_Dist();
+
+}
 
 #endif

src/evb/FastSort.cpp

@@ -1,125 +1,128 @@
 #include "EventBuilder.h"
 #include "FastSort.h"
 
-//windows given in picoseconds, converted to nanoseconds
+namespace EventBuilder {
-FastSort::FastSort(float si_windowSize, float ion_windowSize) :
+	//windows given in picoseconds, converted to nanoseconds
-	si_coincWindow(si_windowSize/1.0e3), ion_coincWindow(ion_windowSize/1.0e3), event_address(nullptr)
+	FastSort::FastSort(float si_windowSize, float ion_windowSize) :
-{
+		si_coincWindow(si_windowSize/1.0e3), ion_coincWindow(ion_windowSize/1.0e3), event_address(nullptr)
-}
-
-FastSort::~FastSort() 
-{
-	delete event_address;
-}
-
-void FastSort::ResetSABRE() 
-{
-	for(int i=0; i<5; i++)
-		fastEvent.sabreArray[i] = sblank;
-}
-
-void FastSort::ResetFocalPlane() 
-{
-	fastEvent.focalPlane = fpblank;
-}
-
-/*Assign a set of ion chamber data to the scintillator*/
-void FastSort::ProcessFocalPlane(unsigned int scint_index, unsigned int ionch_index) {
-
-  /*In order to have a coincidence window, one must choose a portion of the ion chamber to form a requirement.
-   *In this case, I chose one of the anodes. But in principle you could also choose any other part of the ion
-   *chamber
-   */
-	if(slowEvent.focalPlane.anodeB.size() > ionch_index) 
-	{ //Back anode required to move on`
-
-		float anodeRelTime = fabs(slowEvent.focalPlane.anodeB[ionch_index].Time - slowEvent.focalPlane.scintL[scint_index].Time);
-		if(anodeRelTime > ion_coincWindow) 
-			return; //Window check
-
-		fastEvent.focalPlane.anodeB.push_back(slowEvent.focalPlane.anodeB[ionch_index]);
-		fastEvent.focalPlane.scintL.push_back(slowEvent.focalPlane.scintL[scint_index]);
-		if(slowEvent.focalPlane.delayFL.size() > ionch_index)
-			fastEvent.focalPlane.delayFL.push_back(slowEvent.focalPlane.delayFL[ionch_index]);
-
-		if(slowEvent.focalPlane.delayFR.size() > ionch_index)
-			fastEvent.focalPlane.delayFR.push_back(slowEvent.focalPlane.delayFR[ionch_index]);
-
-		if(slowEvent.focalPlane.delayBR.size() > ionch_index)
-			fastEvent.focalPlane.delayBR.push_back(slowEvent.focalPlane.delayBR[ionch_index]);
-
-		if(slowEvent.focalPlane.delayBL.size() > ionch_index)
-			fastEvent.focalPlane.delayBL.push_back(slowEvent.focalPlane.delayBL[ionch_index]);
-
-		if(slowEvent.focalPlane.scintR.size() > ionch_index)
-			fastEvent.focalPlane.scintR.push_back(slowEvent.focalPlane.scintR[ionch_index]);
-
-		if(slowEvent.focalPlane.anodeF.size() > ionch_index)
-			fastEvent.focalPlane.anodeF.push_back(slowEvent.focalPlane.anodeF[ionch_index]);
-
-		if(slowEvent.focalPlane.cathode.size() > ionch_index)
-			fastEvent.focalPlane.cathode.push_back(slowEvent.focalPlane.cathode[ionch_index]);
-	}
-}
-
-/*Assign a set of SABRE data that falls within the coincidence window*/
-void FastSort::ProcessSABRE(unsigned int scint_index) 
-{
-	for(int i=0; i<5; i++) 
-	{ //loop over SABRE silicons
-		std::vector<DetectorHit> rings;
-		std::vector<DetectorHit> wedges;
-
-		if(slowEvent.sabreArray[i].rings.size() == 0 || slowEvent.sabreArray[i].wedges.size() == 0) 
-			continue; //save some time on empties
-
-		/*Dump sabre data that doesnt fall within the fast coincidence window with the scint*/
-		for(unsigned int j=0; j<slowEvent.sabreArray[i].rings.size(); j++) 
-		{
-			float sabreRelTime = fabs(slowEvent.sabreArray[i].rings[j].Time - slowEvent.focalPlane.scintL[scint_index].Time);
-			if(sabreRelTime < si_coincWindow)
-				rings.push_back(slowEvent.sabreArray[i].rings[j]);
-		}
-		for(unsigned int j=0; j<slowEvent.sabreArray[i].wedges.size(); j++) 
-		{
-			float sabreRelTime = fabs(slowEvent.sabreArray[i].wedges[j].Time - slowEvent.focalPlane.scintL[scint_index].Time);
-			if(sabreRelTime < si_coincWindow) 
-				wedges.push_back(slowEvent.sabreArray[i].wedges[j]);
-		}
-	
-		fastEvent.sabreArray[i].rings = rings;
-		fastEvent.sabreArray[i].wedges = wedges;
-	}
-}
-
-std::vector<CoincEvent> FastSort::GetFastEvents(CoincEvent& event) 
-{
-	slowEvent = event;
-	std::vector<CoincEvent> fast_events;
-
-	unsigned int sizeArray[7];
-	sizeArray[0] = slowEvent.focalPlane.delayFL.size();
-	sizeArray[1] = slowEvent.focalPlane.delayFR.size();
-	sizeArray[2] = slowEvent.focalPlane.delayBL.size();
-	sizeArray[3] = slowEvent.focalPlane.delayBR.size();
-	sizeArray[4] = slowEvent.focalPlane.anodeF.size();
-	sizeArray[5] = slowEvent.focalPlane.anodeB.size();
-	sizeArray[6] = slowEvent.focalPlane.cathode.size();
-	unsigned int maxSize = *std::max_element(sizeArray, sizeArray+7);
-	//loop over scints
-	for(unsigned int i=0; i<slowEvent.focalPlane.scintL.size(); i++) 
 	{
-		ResetSABRE();
+	}
-		ProcessSABRE(i);
+	
-		//loop over ion chamber
+	FastSort::~FastSort() 
-		//NOTE: as written, this dumps data that does not have an ion chamber hit!
+	{
-		//If you want scint/SABRE singles, move the fill outside of this loop
+		delete event_address;
-		for(unsigned int j=0; j<maxSize; j++) 
+	}
-		{
+	
-			ResetFocalPlane();
+	void FastSort::ResetSABRE() 
-			ProcessFocalPlane(i, j);
+	{
-			fast_events.push_back(fastEvent);
+		for(int i=0; i<5; i++)
+			fastEvent.sabreArray[i] = sblank;
+	}
+	
+	void FastSort::ResetFocalPlane() 
+	{
+		fastEvent.focalPlane = fpblank;
+	}
+	
+	/*Assign a set of ion chamber data to the scintillator*/
+	void FastSort::ProcessFocalPlane(unsigned int scint_index, unsigned int ionch_index) {
+	
+	  /*In order to have a coincidence window, one must choose a portion of the ion chamber to form a requirement.
+	   *In this case, I chose one of the anodes. But in principle you could also choose any other part of the ion
+	   *chamber
+	   */
+		if(slowEvent.focalPlane.anodeB.size() > ionch_index) 
+		{ //Back anode required to move on`
+	
+			float anodeRelTime = fabs(slowEvent.focalPlane.anodeB[ionch_index].Time - slowEvent.focalPlane.scintL[scint_index].Time);
+			if(anodeRelTime > ion_coincWindow) 
+				return; //Window check
+	
+			fastEvent.focalPlane.anodeB.push_back(slowEvent.focalPlane.anodeB[ionch_index]);
+			fastEvent.focalPlane.scintL.push_back(slowEvent.focalPlane.scintL[scint_index]);
+			if(slowEvent.focalPlane.delayFL.size() > ionch_index)
+				fastEvent.focalPlane.delayFL.push_back(slowEvent.focalPlane.delayFL[ionch_index]);
+	
+			if(slowEvent.focalPlane.delayFR.size() > ionch_index)
+				fastEvent.focalPlane.delayFR.push_back(slowEvent.focalPlane.delayFR[ionch_index]);
+	
+			if(slowEvent.focalPlane.delayBR.size() > ionch_index)
+				fastEvent.focalPlane.delayBR.push_back(slowEvent.focalPlane.delayBR[ionch_index]);
+	
+			if(slowEvent.focalPlane.delayBL.size() > ionch_index)
+				fastEvent.focalPlane.delayBL.push_back(slowEvent.focalPlane.delayBL[ionch_index]);
+	
+			if(slowEvent.focalPlane.scintR.size() > ionch_index)
+				fastEvent.focalPlane.scintR.push_back(slowEvent.focalPlane.scintR[ionch_index]);
+	
+			if(slowEvent.focalPlane.anodeF.size() > ionch_index)
+				fastEvent.focalPlane.anodeF.push_back(slowEvent.focalPlane.anodeF[ionch_index]);
+	
+			if(slowEvent.focalPlane.cathode.size() > ionch_index)
+				fastEvent.focalPlane.cathode.push_back(slowEvent.focalPlane.cathode[ionch_index]);
 		}
 	}
-	return fast_events;
+	
-}
+	/*Assign a set of SABRE data that falls within the coincidence window*/
+	void FastSort::ProcessSABRE(unsigned int scint_index) 
+	{
+		for(int i=0; i<5; i++) 
+		{ //loop over SABRE silicons
+			std::vector<DetectorHit> rings;
+			std::vector<DetectorHit> wedges;
+	
+			if(slowEvent.sabreArray[i].rings.size() == 0 || slowEvent.sabreArray[i].wedges.size() == 0) 
+				continue; //save some time on empties
+	
+			/*Dump sabre data that doesnt fall within the fast coincidence window with the scint*/
+			for(unsigned int j=0; j<slowEvent.sabreArray[i].rings.size(); j++) 
+			{
+				float sabreRelTime = fabs(slowEvent.sabreArray[i].rings[j].Time - slowEvent.focalPlane.scintL[scint_index].Time);
+				if(sabreRelTime < si_coincWindow)
+					rings.push_back(slowEvent.sabreArray[i].rings[j]);
+			}
+			for(unsigned int j=0; j<slowEvent.sabreArray[i].wedges.size(); j++) 
+			{
+				float sabreRelTime = fabs(slowEvent.sabreArray[i].wedges[j].Time - slowEvent.focalPlane.scintL[scint_index].Time);
+				if(sabreRelTime < si_coincWindow) 
+					wedges.push_back(slowEvent.sabreArray[i].wedges[j]);
+			}
+		
+			fastEvent.sabreArray[i].rings = rings;
+			fastEvent.sabreArray[i].wedges = wedges;
+		}
+	}
+	
+	std::vector<CoincEvent> FastSort::GetFastEvents(CoincEvent& event) 
+	{
+		slowEvent = event;
+		std::vector<CoincEvent> fast_events;
+	
+		unsigned int sizeArray[7];
+		sizeArray[0] = slowEvent.focalPlane.delayFL.size();
+		sizeArray[1] = slowEvent.focalPlane.delayFR.size();
+		sizeArray[2] = slowEvent.focalPlane.delayBL.size();
+		sizeArray[3] = slowEvent.focalPlane.delayBR.size();
+		sizeArray[4] = slowEvent.focalPlane.anodeF.size();
+		sizeArray[5] = slowEvent.focalPlane.anodeB.size();
+		sizeArray[6] = slowEvent.focalPlane.cathode.size();
+		unsigned int maxSize = *std::max_element(sizeArray, sizeArray+7);
+		//loop over scints
+		for(unsigned int i=0; i<slowEvent.focalPlane.scintL.size(); i++) 
+		{
+			ResetSABRE();
+			ProcessSABRE(i);
+			//loop over ion chamber
+			//NOTE: as written, this dumps data that does not have an ion chamber hit!
+			//If you want scint/SABRE singles, move the fill outside of this loop
+			for(unsigned int j=0; j<maxSize; j++) 
+			{
+				ResetFocalPlane();
+				ProcessFocalPlane(i, j);
+				fast_events.push_back(fastEvent);
+			}
+		}
+		return fast_events;
+	}
+
+}

src/evb/FastSort.h

@@ -9,26 +9,29 @@
 #include "DataStructs.h"
 #include <TH2.h>
 
-class FastSort 
+namespace EventBuilder {
-{
-  
-public:
-	FastSort(float si_windowSize, float ion_windowSize);
-	~FastSort();
-	std::vector<CoincEvent> GetFastEvents(CoincEvent& event);
 
-private:
+	class FastSort 
-	void ResetSABRE();
+	{
-	void ResetFocalPlane();
+	  
-	void ProcessSABRE(unsigned int scint_index);
+	public:
-	void ProcessFocalPlane(unsigned int scint_index, unsigned int ionch_index);
+		FastSort(float si_windowSize, float ion_windowSize);
-
+		~FastSort();
-	float si_coincWindow, ion_coincWindow;
+		std::vector<CoincEvent> GetFastEvents(CoincEvent& event);
-	CoincEvent *event_address, slowEvent;
+	
-	CoincEvent fastEvent, blank;
+	private:
-	SabreDetector sblank;
+		void ResetSABRE();
-	FPDetector fpblank;
+		void ResetFocalPlane();
-
+		void ProcessSABRE(unsigned int scint_index);
-};
+		void ProcessFocalPlane(unsigned int scint_index, unsigned int ionch_index);
+	
+		float si_coincWindow, ion_coincWindow;
+		CoincEvent *event_address, slowEvent;
+		CoincEvent fastEvent, blank;
+		SabreDetector sblank;
+		FPDetector fpblank;
+	
+	};
 
+}
 #endif

src/evb/FlagHandler.cpp

@@ -1,106 +1,108 @@
 #include "EventBuilder.h"
 #include "FlagHandler.h"
 
-FlagHandler::FlagHandler() : 
+namespace EventBuilder {
-	log("./event_log.txt")
-{
-}
 
-FlagHandler::FlagHandler(const std::string& filename) :
+	FlagHandler::FlagHandler() : 
-	log(filename)
+		log("./event_log.txt")
-{
-}
-
-FlagHandler::~FlagHandler() 
-{
-	WriteLog();
-	log.close();
-}
-
-void FlagHandler::CheckFlag(int board, int channel, int flag) 
-{
-
-	int gchan = channel + board*16;
-	FlagCount& counter = event_count_map[gchan]; //yikes
-
-	counter.total_counts++;
-
-	if(flag & DeadTime) 
-		counter.dead_time++;
-
-	if(flag & TimeRollover) 
-		counter.time_roll++;
-
-	if(flag & TimeReset) 
-		counter.time_reset++;
-
-	if(flag & FakeEvent) 
-		counter.fake_event++;
-
-	if(flag & MemFull) 
-		counter.mem_full++;
-
-	if(flag & TrigLost) 
-		counter.trig_lost++;
-
-	if(flag & NTrigLost) 
-		counter.n_trig_lost++;
-
-	if(flag & SaturatingInGate) 
-		counter.sat_in_gate++;
-
-	if(flag & Trig1024Counted) 
-		counter.trig_1024++;;
-
-	if(flag & SaturatingInput) 
-		counter.sat_input++;
-
-	if(flag & NTrigCounted) 
-		counter.n_trig_count++;
-
-	if(flag & EventNotMatched) 
-		counter.event_not_matched++;
-
-	if(flag & PileUp) 
-		counter.pile_up++;
-
-	if(flag & PLLLockLoss) 
-		counter.pll_lock_loss++;
-
-	if(flag & OverTemp) 
-		counter.over_temp++;
-
-	if(flag & ADCShutdown) 
-		counter.adc_shutdown++;
-
-}
-
-void FlagHandler::WriteLog() 
-{
-	log<<"Event Flag Log"<<std::endl;
-	log<<"-----------------------------"<<std::endl;
-	for(auto& counter : event_count_map) 
 	{
+	}
+	
+	FlagHandler::FlagHandler(const std::string& filename) :
+		log(filename)
+	{
+	}
+	
+	FlagHandler::~FlagHandler() 
+	{
+		WriteLog();
+		log.close();
+	}
+	
+	void FlagHandler::CheckFlag(int board, int channel, int flag) 
+	{
+	
+		int gchan = channel + board*16;
+		FlagCount& counter = event_count_map[gchan]; //yikes
+	
+		counter.total_counts++;
+	
+		if(flag & DeadTime) 
+			counter.dead_time++;
+	
+		if(flag & TimeRollover) 
+			counter.time_roll++;
+	
+		if(flag & TimeReset) 
+			counter.time_reset++;
+	
+		if(flag & FakeEvent) 
+			counter.fake_event++;
+	
+		if(flag & MemFull) 
+			counter.mem_full++;
+	
+		if(flag & TrigLost) 
+			counter.trig_lost++;
+	
+		if(flag & NTrigLost) 
+			counter.n_trig_lost++;
+	
+		if(flag & SaturatingInGate) 
+			counter.sat_in_gate++;
+	
+		if(flag & Trig1024Counted) 
+			counter.trig_1024++;;
+	
+		if(flag & SaturatingInput) 
+			counter.sat_input++;
+	
+		if(flag & NTrigCounted) 
+			counter.n_trig_count++;
+	
+		if(flag & EventNotMatched) 
+			counter.event_not_matched++;
+	
+		if(flag & PileUp) 
+			counter.pile_up++;
+	
+		if(flag & PLLLockLoss) 
+			counter.pll_lock_loss++;
+	
+		if(flag & OverTemp) 
+			counter.over_temp++;
+	
+		if(flag & ADCShutdown) 
+			counter.adc_shutdown++;
+	
+	}
+	
+	void FlagHandler::WriteLog() 
+	{
+		log<<"Event Flag Log"<<std::endl;
 		log<<"-----------------------------"<<std::endl;
-		log<<"GLOBAL CHANNEL No.: "<<counter.first<<std::endl;
+		for(auto& counter : event_count_map) 
-		log<<"Total number of events: "<<counter.second.total_counts<<std::endl;
+		{
-		log<<"Dead time incurred (only for V1724): "<<counter.second.dead_time<<std::endl;
+			log<<"-----------------------------"<<std::endl;
-		log<<"Timestamp rollovers: "<<counter.second.time_roll<<std::endl;
+			log<<"GLOBAL CHANNEL No.: "<<counter.first<<std::endl;
-		log<<"Timestamp resets from external: "<<counter.second.time_reset<<std::endl;
+			log<<"Total number of events: "<<counter.second.total_counts<<std::endl;
-		log<<"Fake events: "<<counter.second.fake_event<<std::endl;
+			log<<"Dead time incurred (only for V1724): "<<counter.second.dead_time<<std::endl;
-		log<<"Memory full: "<<counter.second.mem_full<<std::endl;
+			log<<"Timestamp rollovers: "<<counter.second.time_roll<<std::endl;
-		log<<"Triggers lost: "<<counter.second.trig_lost<<std::endl;
+			log<<"Timestamp resets from external: "<<counter.second.time_reset<<std::endl;
-		log<<"N Triggers lost: "<<counter.second.n_trig_lost<<std::endl;
+			log<<"Fake events: "<<counter.second.fake_event<<std::endl;
-		log<<"Saturation within the gate: "<<counter.second.sat_in_gate<<std::endl;
+			log<<"Memory full: "<<counter.second.mem_full<<std::endl;
-		log<<"1024 Triggers found: "<<counter.second.trig_1024<<std::endl;
+			log<<"Triggers lost: "<<counter.second.trig_lost<<std::endl;
-		log<<"Saturation on input: "<<counter.second.sat_input<<std::endl;
+			log<<"N Triggers lost: "<<counter.second.n_trig_lost<<std::endl;
-		log<<"N Triggers counted: "<<counter.second.n_trig_count<<std::endl;
+			log<<"Saturation within the gate: "<<counter.second.sat_in_gate<<std::endl;
-		log<<"Events not matched: "<<counter.second.event_not_matched<<std::endl;
+			log<<"1024 Triggers found: "<<counter.second.trig_1024<<std::endl;
-		log<<"Pile ups: "<<counter.second.pile_up<<std::endl;
+			log<<"Saturation on input: "<<counter.second.sat_input<<std::endl;
-		log<<"PLL lock lost: "<<counter.second.pll_lock_loss<<std::endl;
+			log<<"N Triggers counted: "<<counter.second.n_trig_count<<std::endl;
-		log<<"Over Temperature: "<<counter.second.over_temp<<std::endl;
+			log<<"Events not matched: "<<counter.second.event_not_matched<<std::endl;
-		log<<"ADC Shutdown: "<<counter.second.adc_shutdown<<std::endl;
+			log<<"Pile ups: "<<counter.second.pile_up<<std::endl;
-		log<<"-----------------------------"<<std::endl;
+			log<<"PLL lock lost: "<<counter.second.pll_lock_loss<<std::endl;
+			log<<"Over Temperature: "<<counter.second.over_temp<<std::endl;
+			log<<"ADC Shutdown: "<<counter.second.adc_shutdown<<std::endl;
+			log<<"-----------------------------"<<std::endl;
+		}
 	}
 }
-

src/evb/FlagHandler.h

@@ -3,59 +3,62 @@
 
 #include <map>
 
-struct FlagCount 
+namespace EventBuilder {
-{
-	long total_counts=0;
-	long dead_time=0;
-	long time_roll=0;
-	long time_reset=0;
-	long fake_event=0;
-	long mem_full=0;
-	long trig_lost=0;
-	long n_trig_lost=0;
-	long sat_in_gate=0;
-	long trig_1024=0;
-	long sat_input=0;
-	long n_trig_count=0;
-	long event_not_matched=0;
-	long fine_time=0;
-	long pile_up=0;
-	long pll_lock_loss=0;
-	long over_temp=0;
-	long adc_shutdown=0;
-};
 
-class FlagHandler 
+	struct FlagCount 
-{
+	{
-public:
+		long total_counts=0;
-	FlagHandler();
+		long dead_time=0;
-	FlagHandler(const std::string& filename);
+		long time_roll=0;
-	~FlagHandler();
+		long time_reset=0;
-	void CheckFlag(int board, int channel, int flag);
+		long fake_event=0;
-
+		long mem_full=0;
-	const int DeadTime = 0x00000001;
+		long trig_lost=0;
-	const int TimeRollover = 0x00000002;
+		long n_trig_lost=0;
-	const int TimeReset = 0x00000004;
+		long sat_in_gate=0;
-	const int FakeEvent = 0x00000008;
+		long trig_1024=0;
-	const int MemFull = 0x00000010;
+		long sat_input=0;
-	const int TrigLost = 0x00000020;
+		long n_trig_count=0;
-	const int NTrigLost = 0x00000040;
+		long event_not_matched=0;
-	const int SaturatingInGate = 0x00000080;
+		long fine_time=0;
-	const int Trig1024Counted = 0x00000100;
+		long pile_up=0;
-	const int SaturatingInput = 0x00000400;
+		long pll_lock_loss=0;
-	const int NTrigCounted = 0x00000800;
+		long over_temp=0;
-	const int EventNotMatched = 0x00001000;
+		long adc_shutdown=0;
-	const int FineTime  = 0x00004000;
+	};
-	const int PileUp = 0x00008000;
+	
-	const int PLLLockLoss = 0x00080000;
+	class FlagHandler 
-	const int OverTemp = 0x00100000;
+	{
-	const int ADCShutdown = 0x00200000;
+	public:
-
+		FlagHandler();
-private:
+		FlagHandler(const std::string& filename);
-	std::ofstream log;
+		~FlagHandler();
-	std::map<int, FlagCount> event_count_map;
+		void CheckFlag(int board, int channel, int flag);
-
+	
-	void WriteLog();
+		const int DeadTime = 0x00000001;
-};
+		const int TimeRollover = 0x00000002;
+		const int TimeReset = 0x00000004;
+		const int FakeEvent = 0x00000008;
+		const int MemFull = 0x00000010;
+		const int TrigLost = 0x00000020;
+		const int NTrigLost = 0x00000040;
+		const int SaturatingInGate = 0x00000080;
+		const int Trig1024Counted = 0x00000100;
+		const int SaturatingInput = 0x00000400;
+		const int NTrigCounted = 0x00000800;
+		const int EventNotMatched = 0x00001000;
+		const int FineTime  = 0x00004000;
+		const int PileUp = 0x00008000;
+		const int PLLLockLoss = 0x00080000;
+		const int OverTemp = 0x00100000;
+		const int ADCShutdown = 0x00200000;
+	
+	private:
+		std::ofstream log;
+		std::map<int, FlagCount> event_count_map;
+	
+		void WriteLog();
+	};
 
+}
 #endif

src/evb/MassLookup.cpp

@@ -11,65 +11,67 @@ Written by G.W. McCann Aug. 2020
 #include "EventBuilder.h"
 #include "MassLookup.h"
 
-
+namespace EventBuilder {
-/*
+	
-  Read in AMDC mass file, preformated to remove excess info. Here assumes that by default
+	/*
-  the file is in a local directory etc/
+	  Read in AMDC mass file, preformated to remove excess info. Here assumes that by default
-*/
+	  the file is in a local directory etc/
-MassLookup::MassLookup() 
+	*/
-{
+	MassLookup::MassLookup() 
-	std::string filepath;
-	#ifdef ETC_DIR_PATH
-		filepath = ETC_DIR_PATH;
-		filepath += "mass.txt";
-	#else
-		filepath = "./etc/mass.txt";
-	#endif
-	std::ifstream massfile(filepath);
-	if(massfile.is_open()) 
 	{
-		int Z,A;
+		std::string filepath;
-		std::string junk, element, key;
+		#ifdef ETC_DIR_PATH
-		double atomicMassBig, atomicMassSmall, isotopicMass;
+			filepath = ETC_DIR_PATH;
-		std::getline(massfile,junk);
+			filepath += "mass.txt";
-		std::getline(massfile,junk);
+		#else
-		while(massfile>>junk) 
+			filepath = "./etc/mass.txt";
+		#endif
+		std::ifstream massfile(filepath);
+		if(massfile.is_open()) 
 		{
-			massfile>>Z>>A>>element>>atomicMassBig>>atomicMassSmall;
+			int Z,A;
-			isotopicMass = (atomicMassBig + atomicMassSmall*1e-6 - Z*electron_mass)*u_to_mev;
+			std::string junk, element, key;
-			key = "("+std::to_string(Z)+","+A+")";
+			double atomicMassBig, atomicMassSmall, isotopicMass;
-			massTable[key] = isotopicMass;
+			std::getline(massfile,junk);
-			elementTable[Z] = element;
+			std::getline(massfile,junk);
+			while(massfile>>junk) 
+			{
+				massfile>>Z>>A>>element>>atomicMassBig>>atomicMassSmall;
+				isotopicMass = (atomicMassBig + atomicMassSmall*1e-6 - Z*electron_mass)*u_to_mev;
+				key = "("+std::to_string(Z)+","+A+")";
+				massTable[key] = isotopicMass;
+				elementTable[Z] = element;
+			}
+		} 
+		else
+	    	std::cerr<<"Unable to open mass.txt at MassLookup! Prepare for errors."<<std::endl;
+	}
+	
+	MassLookup::~MassLookup() {}
+	
+	//Returns nuclear mass in MeV
+	double MassLookup::FindMass(int Z, int A) 
+	{
+		std::string key = "("+std::to_string(Z)+","+std::to_string(A)+")";
+		auto data = massTable.find(key);
+		if(data == massTable.end()) 
+		{
+			std::cerr<<"Invaild nucleus at MassLookup! Returning mass of 0"<<std::endl;
+			return 0;
 		}
-	} 
+		return data->second;
-	else
-    	std::cerr<<"Unable to open mass.txt at MassLookup! Prepare for errors."<<std::endl;
-}
-
-MassLookup::~MassLookup() {}
-
-//Returns nuclear mass in MeV
-double MassLookup::FindMass(int Z, int A) 
-{
-	std::string key = "("+std::to_string(Z)+","+std::to_string(A)+")";
-	auto data = massTable.find(key);
-	if(data == massTable.end()) 
-	{
-		std::cerr<<"Invaild nucleus at MassLookup! Returning mass of 0"<<std::endl;
-		return 0;
 	}
-	return data->second;
+	
-}
+	//returns element symbol
-
+	std::string MassLookup::FindSymbol(int Z, int A) 
-//returns element symbol
-std::string MassLookup::FindSymbol(int Z, int A) 
-{
-	auto data = elementTable.find(Z);
-	if(data == elementTable.end()) 
 	{
-		std::cerr<<"Invaild nucleus at MassLookup! Returning empty symbol"<<std::endl;
+		auto data = elementTable.find(Z);
-		return "";
+		if(data == elementTable.end()) 
+		{
+			std::cerr<<"Invaild nucleus at MassLookup! Returning empty symbol"<<std::endl;
+			return "";
+		}
+		std::string fullsymbol = std::to_string(A) + data->second;
+		return fullsymbol;
 	}
-	std::string fullsymbol = std::to_string(A) + data->second;
+}
-	return fullsymbol;
-}

src/evb/MassLookup.h

@@ -11,25 +11,29 @@ Written by G.W. McCann Aug. 2020
 #ifndef MASS_LOOKUP_H
 #define MASS_LOOKUP_H
 
-class MassLookup 
+namespace EventBuilder {
-{
 
-public:
+	class MassLookup 
-	MassLookup();
+	{
-	~MassLookup();
+	
-	double FindMass(int Z, int A);
+	public:
-	std::string FindSymbol(int Z, int A);
+		MassLookup();
+		~MassLookup();
+		double FindMass(int Z, int A);
+		std::string FindSymbol(int Z, int A);
+	
+	private:
+		std::unordered_map<std::string, double> massTable;
+		std::unordered_map<int, std::string> elementTable;
+	
+		//constants
+		static constexpr double u_to_mev = 931.4940954;
+		static constexpr double electron_mass = 0.000548579909;
+		  
+	};
+	
+	//static instance for use throught program
+	static MassLookup MASS;
 
-private:
+}
-	std::unordered_map<std::string, double> massTable;
-	std::unordered_map<int, std::string> elementTable;
-
-	//constants
-	static constexpr double u_to_mev = 931.4940954;
-	static constexpr double electron_mass = 0.000548579909;
-	  
-};
-
-//static instance for use throught program
-static MassLookup MASS;
 #endif

src/evb/OrderChecker.cpp

@@ -8,33 +8,37 @@
 #include "EventBuilder.h"
 #include "OrderChecker.h"
 
-OrderChecker::OrderChecker() 
+namespace EventBuilder {
-{
+	
-}
+	OrderChecker::OrderChecker() 
-
-OrderChecker::~OrderChecker() 
-{
-}
-
-bool OrderChecker::IsOrdered(const std::string& filename)  
-{
-	TFile* file = TFile::Open(filename.c_str(), "READ");
-	TTree* tree = (TTree*) file->Get("Data");
-
-	uint64_t ts;
-	tree->SetBranchAddress("Timestamp", &ts);
-	uint64_t prevStamp = 0;
-
-	for(Long64_t i=0; i<tree->GetEntries(); i++) 
 	{
-		tree->GetEntry();
+	}
-		if(prevStamp >= ts) 
+	
+	OrderChecker::~OrderChecker() 
+	{
+	}
+	
+	bool OrderChecker::IsOrdered(const std::string& filename)  
+	{
+		TFile* file = TFile::Open(filename.c_str(), "READ");
+		TTree* tree = (TTree*) file->Get("Data");
+	
+		uint64_t ts;
+		tree->SetBranchAddress("Timestamp", &ts);
+		uint64_t prevStamp = 0;
+	
+		for(Long64_t i=0; i<tree->GetEntries(); i++) 
 		{
-			std::cerr<<"Bad order at entry "<<i<<" out of "<<tree->GetEntries()<<std::endl;
+			tree->GetEntry();
-			return false;
+			if(prevStamp >= ts) 
+			{
+				std::cerr<<"Bad order at entry "<<i<<" out of "<<tree->GetEntries()<<std::endl;
+				return false;
+			}
 		}
+	
+		file->Close();
+		return true;
 	}
 
-	file->Close();
+}
-	return true;
-}

src/evb/OrderChecker.h

@@ -8,12 +8,16 @@
 #ifndef ORDERCHECKER_H
 #define ORDERCHECKER_H
 
-class OrderChecker 
+namespace EventBuilder {
-{
+
-public:
+	class OrderChecker 
-	OrderChecker();
+	{
-	~OrderChecker();
+	public:
-	bool IsOrdered(const std::string& filename);
+		OrderChecker();
-};
+		~OrderChecker();
+		bool IsOrdered(const std::string& filename);
+	};
+
+}
 
 #endif

src/evb/RunCollector.cpp

@@ -7,127 +7,89 @@
 #include <cstdlib>
 #include <cstdio>
 
-RunCollector::RunCollector():
+namespace EventBuilder {
-	m_initFlag(false), m_directory(""), m_prefix(""), m_suffix(""), m_minRun(0), m_maxRun(0)
-{
-}
 
-RunCollector::RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix) :
+	RunCollector::RunCollector():
-	m_initFlag(true), m_directory(dirname), m_prefix(prefix), m_suffix(suffix), m_minRun(0), m_maxRun(0)
+		m_initFlag(false), m_directory(""), m_prefix(""), m_suffix(""), m_minRun(0), m_maxRun(0)
-{
-}
-
-RunCollector::RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max) :
-	m_initFlag(true), m_directory(dirname), m_prefix(prefix), m_suffix(suffix), m_minRun(min), m_maxRun(max)
-{
-}
-
-RunCollector::~RunCollector() {}
-
-void RunCollector::SetSearchParams(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max)
-{
-	m_directory = dirname.c_str();
-	m_prefix = prefix.c_str();
-	m_suffix = suffix.c_str();
-	m_minRun = min; m_maxRun = max;
-	m_initFlag = true;
-}
-
-bool RunCollector::GrabAllFiles() 
-{
-	if(!m_initFlag)
-		return false;
-
-	TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
-	TList *flist = sysdir.GetListOfFiles();
-	m_filelist.clear();
-
-	if(!flist)  //Make sure list is real. If not, means no directory
 	{
-		std::cerr<<"Unable to find any files in directory; check name given to the input.txt"<<std::endl;
-		return false;
 	}
-
+	
-	TSystemFile *file;
+	RunCollector::RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix) :
-	std::string fname, temp;
+		m_initFlag(true), m_directory(dirname), m_prefix(prefix), m_suffix(suffix), m_minRun(0), m_maxRun(0)
-	TIter next_element(flist); //List iterator
-	while((file = (TSystemFile*)next_element())) 
 	{
-		temp = file->GetName();
+	}
-		if(temp.size() < m_prefix.size() || temp.size() < m_suffix.size())
+	
-			continue;
+	RunCollector::RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max) :
-		else if(!file->IsDirectory() && !temp.compare(0,m_prefix.size(),m_prefix) && 
+		m_initFlag(true), m_directory(dirname), m_prefix(prefix), m_suffix(suffix), m_minRun(min), m_maxRun(max)
-				!temp.compare(temp.size()-m_suffix.size(), m_suffix.size(), m_suffix)) 
+	{
+	}
+	
+	RunCollector::~RunCollector() {}
+	
+	void RunCollector::SetSearchParams(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max)
+	{
+		m_directory = dirname.c_str();
+		m_prefix = prefix.c_str();
+		m_suffix = suffix.c_str();
+		m_minRun = min; m_maxRun = max;
+		m_initFlag = true;
+	}
+	
+	bool RunCollector::GrabAllFiles() 
+	{
+		if(!m_initFlag)
+			return false;
+	
+		TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
+		TList *flist = sysdir.GetListOfFiles();
+		m_filelist.clear();
+	
+		if(!flist)  //Make sure list is real. If not, means no directory
 		{
-	  		fname = m_directory+temp;
+			std::cerr<<"Unable to find any files in directory; check name given to the input.txt"<<std::endl;
-	  		m_filelist.push_back(fname);
+			return false;
-		} 
+		}
-	}
+	
-
+		TSystemFile *file;
-	delete flist;
+		std::string fname, temp;
-	if(m_filelist.size()>0) 
+		TIter next_element(flist); //List iterator
-		return true;
+		while((file = (TSystemFile*)next_element())) 
-	else 
-	{
-		std::cerr<<"Unable to find files with matching run name in directory; check input.txt"<<std::endl;
-		return false;
-	}
-}
-
-std::string RunCollector::GrabFile(int runNum) {
-	if(!m_initFlag) 
-		return "";
-	TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
-	TList* flist = sysdir.GetListOfFiles();
-
-	if(!flist)
-		return "";
-
-	TSystemFile *file;
-	std::string fname = "", temp;
-	std::string runno = "_"+std::to_string(runNum)+m_suffix;
-	TIter next_element(flist);
-	while((file = (TSystemFile*)next_element())) 
-	{
-		temp = file->GetName();
-		if(temp.size() < m_prefix.size() || temp.size() < runno.size())
-			continue;
-		else if(!file->IsDirectory() && !temp.compare(0,m_prefix.size(),m_prefix) && 
-				!temp.compare(temp.size()-runno.size(),runno.size(), runno)) 
 		{
-			fname = m_directory+temp;
+			temp = file->GetName();
-			break;
+			if(temp.size() < m_prefix.size() || temp.size() < m_suffix.size())
+				continue;
+			else if(!file->IsDirectory() && !temp.compare(0,m_prefix.size(),m_prefix) && 
+					!temp.compare(temp.size()-m_suffix.size(), m_suffix.size(), m_suffix)) 
+			{
+		  		fname = m_directory+temp;
+		  		m_filelist.push_back(fname);
+			} 
+		}
+	
+		delete flist;
+		if(m_filelist.size()>0) 
+			return true;
+		else 
+		{
+			std::cerr<<"Unable to find files with matching run name in directory; check input.txt"<<std::endl;
+			return false;
 		}
 	}
-
+	
-	delete flist;
+	std::string RunCollector::GrabFile(int runNum) {
-	return fname;
+		if(!m_initFlag) 
-}
+			return "";
-
+		TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
-/*Grabs all files within a specified run range*/
+		TList* flist = sysdir.GetListOfFiles();
-bool RunCollector::GrabFilesInRange() 
+	
-{
+		if(!flist)
-	if(!m_initFlag)
+			return "";
-		return false;
+	
-
+		TSystemFile *file;
-	TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
+		std::string fname = "", temp;
-	TList *flist = sysdir.GetListOfFiles();
+		std::string runno = "_"+std::to_string(runNum)+m_suffix;
-	m_filelist.clear();
+		TIter next_element(flist);
-
+		while((file = (TSystemFile*)next_element())) 
-	if(!flist) 
-	{
-		std::cerr<<"Unable to find any files in directory; check name given to input.txt"<<std::endl;
-		return false;
-	}
-
-	TSystemFile *file;
-	std::string fname, temp;
-	std::string runno;
-	for(int i=m_minRun; i<=m_maxRun; i++) //loop over range
-	{
-		TIter next_element(flist);//list iterator
-		runno = "_"+std::to_string(i) + m_suffix; //suffix is now _#.suffix
-		while((file = (TSystemFile*)next_element())) //look through directory until file found
 		{
 			temp = file->GetName();
 			if(temp.size() < m_prefix.size() || temp.size() < runno.size())
@@ -136,96 +98,138 @@ bool RunCollector::GrabFilesInRange()
 					!temp.compare(temp.size()-runno.size(),runno.size(), runno)) 
 			{
 				fname = m_directory+temp;
-				m_filelist.push_back(fname);
+				break;
-				break; //if we find the file, break out of iterator loop
 			}
 		}
+	
+		delete flist;
+		return fname;
 	}
-
+	
-	delete flist;
+	/*Grabs all files within a specified run range*/
-	if(m_filelist.size()>0)
+	bool RunCollector::GrabFilesInRange() 
-		return true;
-	else 
 	{
-		std::cerr<<"Unable to find files with matching run name in directory; check input.txt"<<std::endl;
+		if(!m_initFlag)
-		return false;
-	}
-
-}
-
-bool RunCollector::Merge_hadd(const std::string& outname) 
-{
-	if(!m_initFlag) 
-		return false;
-
-	if(m_maxRun == 0) 
-	{
-		if(GrabAllFiles()) 
-		{ 
-			std::string clump = "hadd "+outname;
-			for(unsigned int i=0; i<m_filelist.size(); i++) 
-				clump += " "+m_filelist[i];
-			std::cout<<"Merging runs into single file..."<<std::endl;
-			std::system(clump.c_str());
-			std::cout<<"Finished merging"<<std::endl;
-			return true;
-		} 
-		else
 			return false;
-	} 
+	
-	else 
+		TSystemDirectory sysdir(m_directory.c_str(), m_directory.c_str());
-	{
+		TList *flist = sysdir.GetListOfFiles();
-		if(GrabFilesInRange()) 
+		m_filelist.clear();
+	
+		if(!flist) 
 		{
-			std::string clump = "hadd "+outname;
+			std::cerr<<"Unable to find any files in directory; check name given to input.txt"<<std::endl;
-			for(unsigned int i=0; i<m_filelist.size(); i++)
+			return false;
-				clump += " "+m_filelist[i];
+		}
-			std::cout<<"Merging runs "<<m_minRun<<" to "<<m_maxRun<<" into a single file..."<<std::endl;
+	
-			std::system(clump.c_str());
+		TSystemFile *file;
-			std::cout<<"Finished merging"<<std::endl;
+		std::string fname, temp;
+		std::string runno;
+		for(int i=m_minRun; i<=m_maxRun; i++) //loop over range
+		{
+			TIter next_element(flist);//list iterator
+			runno = "_"+std::to_string(i) + m_suffix; //suffix is now _#.suffix
+			while((file = (TSystemFile*)next_element())) //look through directory until file found
+			{
+				temp = file->GetName();
+				if(temp.size() < m_prefix.size() || temp.size() < runno.size())
+					continue;
+				else if(!file->IsDirectory() && !temp.compare(0,m_prefix.size(),m_prefix) && 
+						!temp.compare(temp.size()-runno.size(),runno.size(), runno)) 
+				{
+					fname = m_directory+temp;
+					m_filelist.push_back(fname);
+					break; //if we find the file, break out of iterator loop
+				}
+			}
+		}
+	
+		delete flist;
+		if(m_filelist.size()>0)
 			return true;
+		else 
+		{
+			std::cerr<<"Unable to find files with matching run name in directory; check input.txt"<<std::endl;
+			return false;
+		}
+	
+	}
+	
+	bool RunCollector::Merge_hadd(const std::string& outname) 
+	{
+		if(!m_initFlag) 
+			return false;
+	
+		if(m_maxRun == 0) 
+		{
+			if(GrabAllFiles()) 
+			{ 
+				std::string clump = "hadd "+outname;
+				for(unsigned int i=0; i<m_filelist.size(); i++) 
+					clump += " "+m_filelist[i];
+				std::cout<<"Merging runs into single file..."<<std::endl;
+				std::system(clump.c_str());
+				std::cout<<"Finished merging"<<std::endl;
+				return true;
+			} 
+			else
+				return false;
 		} 
 		else 
-			return false;
-	}
-}
-
-bool RunCollector::Merge_TChain(const std::string& outname) 
-{
-	if(!m_initFlag)
-		return false;
-	TFile *output = new TFile(outname.c_str(), "RECREATE");
-	TChain *chain = new TChain("SPSTree", "SPSTree");
-	
-	if(m_maxRun == 0) 
-	{
-		if(GrabAllFiles()) 
-		{ 
-			for(unsigned int i=0; i<m_filelist.size(); i++)
-				chain->Add(m_filelist[i].c_str());
-			std::cout<<"Merging runs into single file..."<<std::endl;
-			chain->Merge(output,0,"fast");
-			std::cout<<"Finished merging"<<std::endl;
-			return true;
-		} 
-		else
-			return false;
-	} 
-	else 
-	{
-		if(GrabFilesInRange()) 
 		{
-			for(unsigned int i=0; i<m_filelist.size(); i++)
+			if(GrabFilesInRange()) 
-				chain->Add(m_filelist[i].c_str());
+			{
-			std::cout<<"Merging runs "<<m_minRun<<" to "<<m_maxRun<<" into a single file..."<<std::endl;
+				std::string clump = "hadd "+outname;
-			chain->Merge(output,0,"fast");
+				for(unsigned int i=0; i<m_filelist.size(); i++)
-			std::cout<<"Finished merging"<<std::endl;
+					clump += " "+m_filelist[i];
-			return true;
+				std::cout<<"Merging runs "<<m_minRun<<" to "<<m_maxRun<<" into a single file..."<<std::endl;
-		} else
+				std::system(clump.c_str());
+				std::cout<<"Finished merging"<<std::endl;
+				return true;
+			} 
+			else 
+				return false;
+		}
+	}
+	
+	bool RunCollector::Merge_TChain(const std::string& outname) 
+	{
+		if(!m_initFlag)
 			return false;
+		TFile *output = new TFile(outname.c_str(), "RECREATE");
+		TChain *chain = new TChain("SPSTree", "SPSTree");
+		
+		if(m_maxRun == 0) 
+		{
+			if(GrabAllFiles()) 
+			{ 
+				for(unsigned int i=0; i<m_filelist.size(); i++)
+					chain->Add(m_filelist[i].c_str());
+				std::cout<<"Merging runs into single file..."<<std::endl;
+				chain->Merge(output,0,"fast");
+				std::cout<<"Finished merging"<<std::endl;
+				return true;
+			} 
+			else
+				return false;
+		} 
+		else 
+		{
+			if(GrabFilesInRange()) 
+			{
+				for(unsigned int i=0; i<m_filelist.size(); i++)
+					chain->Add(m_filelist[i].c_str());
+				std::cout<<"Merging runs "<<m_minRun<<" to "<<m_maxRun<<" into a single file..."<<std::endl;
+				chain->Merge(output,0,"fast");
+				std::cout<<"Finished merging"<<std::endl;
+				return true;
+			} else
+				return false;
+		}
+	
+		if(output->IsOpen()) 
+			output->Close();
+		return false;
 	}
 
-	if(output->IsOpen()) 
+}
-		output->Close();
-	return false;
-}

src/evb/RunCollector.h

@@ -10,35 +10,38 @@
 #ifndef RUNCOLLECTOR_H
 #define RUNCOLLECTOR_H
 
-class RunCollector 
+namespace EventBuilder {
-{
-public:
-	RunCollector();
-	RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix);
-	RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max);
-	~RunCollector();
-	void SetSearchParams(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max);
-	bool Merge_hadd(const std::string& outname);
-	bool Merge_TChain(const std::string& outname);
-	bool GrabAllFiles();
-	bool GrabFilesInRange();
-	std::string GrabFile(int runNum);
-	inline std::string GetSearchDir() { return m_directory; }
-	inline std::string GetSearchPrefix() { return m_prefix; }
-	inline std::string GetSearchSuffix() { return m_suffix; }
-	inline int GetRunMin() { return m_minRun; }
-	inline int GetRunMax() { return m_maxRun; }
-	inline const std::vector<std::string>& GetFileList() { return m_filelist; }
 
-private:
+	class RunCollector 
-	bool m_initFlag;
+	{
-	std::string m_directory;
+	public:
-	std::string m_prefix;
+		RunCollector();
-	std::string m_suffix;
+		RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix);
-	int m_minRun, m_maxRun;  //user run limits
+		RunCollector(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max);
-	const int m_maxAllowedRuns = 1000; //class run limit
+		~RunCollector();
-	std::vector<std::string> m_filelist;
+		void SetSearchParams(const std::string& dirname, const std::string& prefix, const std::string& suffix, int min, int max);
+		bool Merge_hadd(const std::string& outname);
+		bool Merge_TChain(const std::string& outname);
+		bool GrabAllFiles();
+		bool GrabFilesInRange();
+		std::string GrabFile(int runNum);
+		inline std::string GetSearchDir() { return m_directory; }
+		inline std::string GetSearchPrefix() { return m_prefix; }
+		inline std::string GetSearchSuffix() { return m_suffix; }
+		inline int GetRunMin() { return m_minRun; }
+		inline int GetRunMax() { return m_maxRun; }
+		inline const std::vector<std::string>& GetFileList() { return m_filelist; }
 	
-};
+	private:
+		bool m_initFlag;
+		std::string m_directory;
+		std::string m_prefix;
+		std::string m_suffix;
+		int m_minRun, m_maxRun;  //user run limits
+		const int m_maxAllowedRuns = 1000; //class run limit
+		std::vector<std::string> m_filelist;
+		
+	};
 
+}
 #endif

src/evb/SFPAnalyzer.cpp

@@ -12,194 +12,197 @@
 #include "EventBuilder.h"
 #include "SFPAnalyzer.h"
 
+namespace EventBuilder {
 
-/*Constructor takes in kinematic parameters for generating focal plane weights*/
+	/*Constructor takes in kinematic parameters for generating focal plane weights*/
-SFPAnalyzer::SFPAnalyzer(int zt, int at, int zp, int ap, int ze, int ae, double ep,
+	SFPAnalyzer::SFPAnalyzer(int zt, int at, int zp, int ap, int ze, int ae, double ep,
-							double angle, double b) 
+								double angle, double b) 
-{
-	zfp = Delta_Z(zt, at, zp, ap, ze, ae, ep, angle, b);
-	event_address = new CoincEvent();
-	rootObj = new THashTable();
-	GetWeights();
-}
-
-SFPAnalyzer::~SFPAnalyzer() 
-{
-	rootObj->Clear();
-	delete rootObj;
-	delete event_address;
-}
-
-void SFPAnalyzer::Reset() 
-{
-	pevent = blank; //set output back to blank
-}
-
-/*Use functions from FP_kinematics to calculate weights for xavg
- *While this seems kind of funny, it is mathematically equivalent to making a line
- *from the two focal plane points and finding the intersection with 
- *the kinematic focal plane
- */
-void SFPAnalyzer::GetWeights() 
-{
-	w1 = (Wire_Dist()/2.0-zfp)/Wire_Dist();
-	w2 = 1.0-w1;
-	std::cout<<"w1: "<<w1<<" w2: "<<w2<<std::endl;
-}
-
-/*2D histogram fill wrapper for use with THashTable (faster)*/
-void SFPAnalyzer::MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex,
-							int binsy, double miny, double maxy, double valuey) 
-{
-	TH2F *histo = (TH2F*) rootObj->FindObject(name.c_str());
-	if(histo != nullptr) 
-		histo->Fill(valuex, valuey);
-	else 
 	{
-		TH2F *h = new TH2F(name.c_str(), name.c_str(), binsx, minx, maxx, binsy, miny, maxy);
+		zfp = Delta_Z(zt, at, zp, ap, ze, ae, ep, angle, b);
-		h->Fill(valuex, valuey);
+		event_address = new CoincEvent();
-		rootObj->Add(h);
+		rootObj = new THashTable();
+		GetWeights();
 	}
-}
+	
-
+	SFPAnalyzer::~SFPAnalyzer() 
-/*1D histogram fill wrapper for use with THashTable (faster)*/
-void SFPAnalyzer::MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex)
-{
-	TH1F *histo = (TH1F*) rootObj->FindObject(name.c_str());
-	if(histo != nullptr)
-		histo->Fill(valuex);
-	else 
 	{
-		TH1F *h = new TH1F(name.c_str(), name.c_str(), binsx, minx, maxx);
+		rootObj->Clear();
-		h->Fill(valuex);
+		delete rootObj;
-		rootObj->Add(h);
+		delete event_address;
 	}
-}
+	
-
+	void SFPAnalyzer::Reset() 
-void SFPAnalyzer::AnalyzeEvent(CoincEvent& event) 
-{
-	Reset();
-	if(!event.focalPlane.anodeF.empty()) 
 	{
-		pevent.anodeFront = event.focalPlane.anodeF[0].Long;
+		pevent = blank; //set output back to blank
-		pevent.anodeFrontTime = event.focalPlane.anodeF[0].Time;
 	}
-	if(!event.focalPlane.anodeB.empty()) 
+	
+	/*Use functions from FP_kinematics to calculate weights for xavg
+	 *While this seems kind of funny, it is mathematically equivalent to making a line
+	 *from the two focal plane points and finding the intersection with 
+	 *the kinematic focal plane
+	 */
+	void SFPAnalyzer::GetWeights() 
 	{
-		pevent.anodeBack = event.focalPlane.anodeB[0].Long;
+		w1 = (Wire_Dist()/2.0-zfp)/Wire_Dist();
-		pevent.anodeBackTime = event.focalPlane.anodeB[0].Time;
+		w2 = 1.0-w1;
+		std::cout<<"w1: "<<w1<<" w2: "<<w2<<std::endl;
 	}
-	if(!event.focalPlane.scintL.empty()) 
+	
+	/*2D histogram fill wrapper for use with THashTable (faster)*/
+	void SFPAnalyzer::MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex,
+								int binsy, double miny, double maxy, double valuey) 
 	{
-		pevent.scintLeft = event.focalPlane.scintL[0].Long;
+		TH2F *histo = (TH2F*) rootObj->FindObject(name.c_str());
-		pevent.scintLeftShort = event.focalPlane.scintL[0].Short;
+		if(histo != nullptr) 
-		pevent.scintLeftTime = event.focalPlane.scintL[0].Time;
+			histo->Fill(valuex, valuey);
-	}
-	if(!event.focalPlane.scintR.empty()) 
-	{
-		pevent.scintRight = event.focalPlane.scintR[0].Long;
-		pevent.scintRightShort = event.focalPlane.scintR[0].Short;
-		pevent.scintRightTime = event.focalPlane.scintR[0].Time;
-	}
-	if(!event.focalPlane.cathode.empty()) 
-	{
-		pevent.cathode = event.focalPlane.cathode[0].Long;
-		pevent.cathodeTime = event.focalPlane.cathode[0].Time;
-	}
-	if(!event.focalPlane.monitor.empty()) 
-	{
-		pevent.monitorE = event.focalPlane.monitor[0].Long;
-		pevent.monitorShort = event.focalPlane.monitor[0].Short;
-		pevent.monitorTime = event.focalPlane.monitor[0].Time;
-	}
-
-	/*Delay lines and all that*/
-	if(!event.focalPlane.delayFR.empty()) 
-	{
-		pevent.delayFrontRightE = event.focalPlane.delayFR[0].Long;
-		pevent.delayFrontRightTime = event.focalPlane.delayFR[0].Time;
-		pevent.delayFrontRightShort = event.focalPlane.delayFR[0].Short;
-	}
-	if(!event.focalPlane.delayFL.empty()) 
-	{
-		pevent.delayFrontLeftE = event.focalPlane.delayFL[0].Long;
-		pevent.delayFrontLeftTime = event.focalPlane.delayFL[0].Time;
-		pevent.delayFrontLeftShort = event.focalPlane.delayFL[0].Short;
-	}
-	if(!event.focalPlane.delayBR.empty()) 
-	{
-		pevent.delayBackRightE = event.focalPlane.delayBR[0].Long;
-		pevent.delayBackRightTime = event.focalPlane.delayBR[0].Time;
-		pevent.delayBackRightShort = event.focalPlane.delayBR[0].Short;
-	}
-	if(!event.focalPlane.delayBL.empty()) 
-	{
-		pevent.delayBackLeftE = event.focalPlane.delayBL[0].Long;
-		pevent.delayBackLeftTime = event.focalPlane.delayBL[0].Time;
-		pevent.delayBackLeftShort = event.focalPlane.delayBL[0].Short;
-	}	
-	if(!event.focalPlane.delayFL.empty() && !event.focalPlane.delayFR.empty()) 
-	{ 
-		pevent.fp1_tdiff = (event.focalPlane.delayFL[0].Time-event.focalPlane.delayFR[0].Time)*0.5;
-		pevent.fp1_tsum = (event.focalPlane.delayFL[0].Time+event.focalPlane.delayFR[0].Time);
-		pevent.fp1_tcheck = (pevent.fp1_tsum)/2.0-pevent.anodeFrontTime;
-		pevent.delayFrontMaxTime = std::max(event.focalPlane.delayFL[0].Time, event.focalPlane.delayFR[0].Time);
-		pevent.x1 = pevent.fp1_tdiff*1.0/2.10; //position from time, based on total delay
-		MyFill("x1",1200,-300,300,pevent.x1);
-		MyFill("x1 vs anodeBack",600,-300,300,pevent.x1,512,0,4096,pevent.anodeBack);
-	}
-	if(!event.focalPlane.delayBL.empty() && !event.focalPlane.delayBR.empty()) 
-	{
-		pevent.fp2_tdiff = (event.focalPlane.delayBL[0].Time-event.focalPlane.delayBR[0].Time)*0.5;
-		pevent.fp2_tsum = (event.focalPlane.delayBL[0].Time+event.focalPlane.delayBR[0].Time);
-		pevent.fp2_tcheck = (pevent.fp2_tsum)/2.0-pevent.anodeBackTime;
-		pevent.delayBackMaxTime = std::max(event.focalPlane.delayBL[0].Time, event.focalPlane.delayBR[0].Time);
-		pevent.x2 = pevent.fp2_tdiff*1.0/1.98; //position from time, based on total delay
-		MyFill("x2",1200,-300,300,pevent.x2);
-		MyFill("x2 vs anodeBack",600,-300,300,pevent.x2,512,0,4096,pevent.anodeBack);
-	}
-	/*SABRE data*/
-	for(int j=0; j<5; j++) 
-	{
-		if(!event.sabreArray[j].rings.empty()) 
-		{
-			pevent.sabreRingE[j] = event.sabreArray[j].rings[0].Long;
-			pevent.sabreRingChannel[j] = event.sabreArray[j].rings[0].Ch;
-			pevent.sabreRingTime[j] = event.sabreArray[j].rings[0].Time;
-		}
-		if(!event.sabreArray[j].wedges.empty()) 
-		{
-			pevent.sabreWedgeE[j] = event.sabreArray[j].wedges[0].Long;
-			pevent.sabreWedgeChannel[j] = event.sabreArray[j].wedges[0].Ch;
-			pevent.sabreWedgeTime[j] = event.sabreArray[j].wedges[0].Time;
-		}
-		/*Aaaand passes on all of the rest. 4/24/20 GWM*/
-		pevent.sabreArray[j] = event.sabreArray[j];
-	}
-
-	/*Make some histograms and xavg*/
-	MyFill("anodeBack vs scintLeft",512,0,4096,pevent.scintLeft,512,0,4096,pevent.anodeBack);
-	if(pevent.x1 != -1e6 && pevent.x2 != -1e6) 
-	{
-		pevent.xavg = pevent.x1*w1+pevent.x2*w2;
-		MyFill("xavg",1200,-300,300,pevent.xavg);
-		if((pevent.x2-pevent.x1) > 0) 
-			pevent.theta = std::atan((pevent.x2-pevent.x1)/36.0);
-		else if((pevent.x2-pevent.x1) < 0)
-			pevent.theta = TMath::Pi() + std::atan((pevent.x2-pevent.x1)/36.0);
 		else 
-			pevent.theta = TMath::Pi()/2.0;
+		{
-		MyFill("xavg vs theta",600,-300,300,pevent.xavg,314,0,3.14,pevent.theta);
+			TH2F *h = new TH2F(name.c_str(), name.c_str(), binsx, minx, maxx, binsy, miny, maxy);
-		MyFill("x1 vs x2",600,-300,300,pevent.x1,600,-300,300,pevent.x2);
+			h->Fill(valuex, valuey);
+			rootObj->Add(h);
+		}
+	}
+	
+	/*1D histogram fill wrapper for use with THashTable (faster)*/
+	void SFPAnalyzer::MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex)
+	{
+		TH1F *histo = (TH1F*) rootObj->FindObject(name.c_str());
+		if(histo != nullptr)
+			histo->Fill(valuex);
+		else 
+		{
+			TH1F *h = new TH1F(name.c_str(), name.c_str(), binsx, minx, maxx);
+			h->Fill(valuex);
+			rootObj->Add(h);
+		}
+	}
+	
+	void SFPAnalyzer::AnalyzeEvent(CoincEvent& event) 
+	{
+		Reset();
+		if(!event.focalPlane.anodeF.empty()) 
+		{
+			pevent.anodeFront = event.focalPlane.anodeF[0].Long;
+			pevent.anodeFrontTime = event.focalPlane.anodeF[0].Time;
+		}
+		if(!event.focalPlane.anodeB.empty()) 
+		{
+			pevent.anodeBack = event.focalPlane.anodeB[0].Long;
+			pevent.anodeBackTime = event.focalPlane.anodeB[0].Time;
+		}
+		if(!event.focalPlane.scintL.empty()) 
+		{
+			pevent.scintLeft = event.focalPlane.scintL[0].Long;
+			pevent.scintLeftShort = event.focalPlane.scintL[0].Short;
+			pevent.scintLeftTime = event.focalPlane.scintL[0].Time;
+		}
+		if(!event.focalPlane.scintR.empty()) 
+		{
+			pevent.scintRight = event.focalPlane.scintR[0].Long;
+			pevent.scintRightShort = event.focalPlane.scintR[0].Short;
+			pevent.scintRightTime = event.focalPlane.scintR[0].Time;
+		}
+		if(!event.focalPlane.cathode.empty()) 
+		{
+			pevent.cathode = event.focalPlane.cathode[0].Long;
+			pevent.cathodeTime = event.focalPlane.cathode[0].Time;
+		}
+		if(!event.focalPlane.monitor.empty()) 
+		{
+			pevent.monitorE = event.focalPlane.monitor[0].Long;
+			pevent.monitorShort = event.focalPlane.monitor[0].Short;
+			pevent.monitorTime = event.focalPlane.monitor[0].Time;
+		}
+	
+		/*Delay lines and all that*/
+		if(!event.focalPlane.delayFR.empty()) 
+		{
+			pevent.delayFrontRightE = event.focalPlane.delayFR[0].Long;
+			pevent.delayFrontRightTime = event.focalPlane.delayFR[0].Time;
+			pevent.delayFrontRightShort = event.focalPlane.delayFR[0].Short;
+		}
+		if(!event.focalPlane.delayFL.empty()) 
+		{
+			pevent.delayFrontLeftE = event.focalPlane.delayFL[0].Long;
+			pevent.delayFrontLeftTime = event.focalPlane.delayFL[0].Time;
+			pevent.delayFrontLeftShort = event.focalPlane.delayFL[0].Short;
+		}
+		if(!event.focalPlane.delayBR.empty()) 
+		{
+			pevent.delayBackRightE = event.focalPlane.delayBR[0].Long;
+			pevent.delayBackRightTime = event.focalPlane.delayBR[0].Time;
+			pevent.delayBackRightShort = event.focalPlane.delayBR[0].Short;
+		}
+		if(!event.focalPlane.delayBL.empty()) 
+		{
+			pevent.delayBackLeftE = event.focalPlane.delayBL[0].Long;
+			pevent.delayBackLeftTime = event.focalPlane.delayBL[0].Time;
+			pevent.delayBackLeftShort = event.focalPlane.delayBL[0].Short;
+		}	
+		if(!event.focalPlane.delayFL.empty() && !event.focalPlane.delayFR.empty()) 
+		{ 
+			pevent.fp1_tdiff = (event.focalPlane.delayFL[0].Time-event.focalPlane.delayFR[0].Time)*0.5;
+			pevent.fp1_tsum = (event.focalPlane.delayFL[0].Time+event.focalPlane.delayFR[0].Time);
+			pevent.fp1_tcheck = (pevent.fp1_tsum)/2.0-pevent.anodeFrontTime;
+			pevent.delayFrontMaxTime = std::max(event.focalPlane.delayFL[0].Time, event.focalPlane.delayFR[0].Time);
+			pevent.x1 = pevent.fp1_tdiff*1.0/2.10; //position from time, based on total delay
+			MyFill("x1",1200,-300,300,pevent.x1);
+			MyFill("x1 vs anodeBack",600,-300,300,pevent.x1,512,0,4096,pevent.anodeBack);
+		}
+		if(!event.focalPlane.delayBL.empty() && !event.focalPlane.delayBR.empty()) 
+		{
+			pevent.fp2_tdiff = (event.focalPlane.delayBL[0].Time-event.focalPlane.delayBR[0].Time)*0.5;
+			pevent.fp2_tsum = (event.focalPlane.delayBL[0].Time+event.focalPlane.delayBR[0].Time);
+			pevent.fp2_tcheck = (pevent.fp2_tsum)/2.0-pevent.anodeBackTime;
+			pevent.delayBackMaxTime = std::max(event.focalPlane.delayBL[0].Time, event.focalPlane.delayBR[0].Time);
+			pevent.x2 = pevent.fp2_tdiff*1.0/1.98; //position from time, based on total delay
+			MyFill("x2",1200,-300,300,pevent.x2);
+			MyFill("x2 vs anodeBack",600,-300,300,pevent.x2,512,0,4096,pevent.anodeBack);
+		}
+		/*SABRE data*/
+		for(int j=0; j<5; j++) 
+		{
+			if(!event.sabreArray[j].rings.empty()) 
+			{
+				pevent.sabreRingE[j] = event.sabreArray[j].rings[0].Long;
+				pevent.sabreRingChannel[j] = event.sabreArray[j].rings[0].Ch;
+				pevent.sabreRingTime[j] = event.sabreArray[j].rings[0].Time;
+			}
+			if(!event.sabreArray[j].wedges.empty()) 
+			{
+				pevent.sabreWedgeE[j] = event.sabreArray[j].wedges[0].Long;
+				pevent.sabreWedgeChannel[j] = event.sabreArray[j].wedges[0].Ch;
+				pevent.sabreWedgeTime[j] = event.sabreArray[j].wedges[0].Time;
+			}
+			/*Aaaand passes on all of the rest. 4/24/20 GWM*/
+			pevent.sabreArray[j] = event.sabreArray[j];
+		}
+	
+		/*Make some histograms and xavg*/
+		MyFill("anodeBack vs scintLeft",512,0,4096,pevent.scintLeft,512,0,4096,pevent.anodeBack);
+		if(pevent.x1 != -1e6 && pevent.x2 != -1e6) 
+		{
+			pevent.xavg = pevent.x1*w1+pevent.x2*w2;
+			MyFill("xavg",1200,-300,300,pevent.xavg);
+			if((pevent.x2-pevent.x1) > 0) 
+				pevent.theta = std::atan((pevent.x2-pevent.x1)/36.0);
+			else if((pevent.x2-pevent.x1) < 0)
+				pevent.theta = TMath::Pi() + std::atan((pevent.x2-pevent.x1)/36.0);
+			else 
+				pevent.theta = TMath::Pi()/2.0;
+			MyFill("xavg vs theta",600,-300,300,pevent.xavg,314,0,3.14,pevent.theta);
+			MyFill("x1 vs x2",600,-300,300,pevent.x1,600,-300,300,pevent.x2);
+		}
+		if(pevent.anodeFrontTime != -1 && pevent.scintRightTime != -1) 
+			pevent.fp1_y = pevent.anodeFrontTime-pevent.scintRightTime;
+		if(pevent.anodeBackTime != -1 && pevent.scintRightTime != -1) 
+			pevent.fp2_y = pevent.anodeBackTime-pevent.scintRightTime;
+	}
+	
+	ProcessedEvent SFPAnalyzer::GetProcessedEvent(CoincEvent& event)
+	{
+		AnalyzeEvent(event);
+		return pevent;
 	}
-	if(pevent.anodeFrontTime != -1 && pevent.scintRightTime != -1) 
-		pevent.fp1_y = pevent.anodeFrontTime-pevent.scintRightTime;
-	if(pevent.anodeBackTime != -1 && pevent.scintRightTime != -1) 
-		pevent.fp2_y = pevent.anodeBackTime-pevent.scintRightTime;
-}
 
-ProcessedEvent SFPAnalyzer::GetProcessedEvent(CoincEvent& event)
+}
-{
-	AnalyzeEvent(event);
-	return pevent;
-}

src/evb/SFPAnalyzer.h

@@ -13,33 +13,36 @@
 #include "DataStructs.h"
 #include "FP_kinematics.h"
 
+namespace EventBuilder {
 
-class SFPAnalyzer
+	class SFPAnalyzer
-{
+	{
-public:
+	public:
-	SFPAnalyzer(int zt, int at, int zp, int ap, int ze, int ae, double ep, double angle,
+		SFPAnalyzer(int zt, int at, int zp, int ap, int ze, int ae, double ep, double angle,
-	            double b);
+		            double b);
-	~SFPAnalyzer();
+		~SFPAnalyzer();
-	ProcessedEvent GetProcessedEvent(CoincEvent& event);
+		ProcessedEvent GetProcessedEvent(CoincEvent& event);
-	inline void ClearHashTable() { rootObj->Clear(); }
+		inline void ClearHashTable() { rootObj->Clear(); }
-	inline THashTable* GetHashTable() { return rootObj; }
+		inline THashTable* GetHashTable() { return rootObj; }
+	
+	private:
+		void Reset(); //Sets ouput structure back to "zero"
+		void GetWeights(); //weights for xavg
+		void AnalyzeEvent(CoincEvent& event);
+	
+		/*Fill wrappers for use with THashTable*/
+		void MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex,
+					int binsy, double miny, double maxy, double valuey);
+		void MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex);
+	
+		CoincEvent *event_address; //Input branch address
+		ProcessedEvent pevent, blank; //output branch and reset
+	
+		double w1, w2, zfp;
+	
+		THashTable *rootObj; //root storage
+	};
 
-private:
+}
-	void Reset(); //Sets ouput structure back to "zero"
-	void GetWeights(); //weights for xavg
-	void AnalyzeEvent(CoincEvent& event);
-
-	/*Fill wrappers for use with THashTable*/
-	void MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex,
-				int binsy, double miny, double maxy, double valuey);
-	void MyFill(const std::string& name, int binsx, double minx, double maxx, double valuex);
-
-	CoincEvent *event_address; //Input branch address
-	ProcessedEvent pevent, blank; //output branch and reset
-
-	double w1, w2, zfp;
-
-	THashTable *rootObj; //root storage
-};
 
 #endif

src/evb/SFPPlotter.cpp

@@ -10,287 +10,291 @@
 #include "SFPPlotter.h"
 #include <TSystem.h>
 
-/*Generates storage and initializes pointers*/
+namespace EventBuilder {
-SFPPlotter::SFPPlotter()
-{
-	event_address = new ProcessedEvent();
-	m_pb = nullptr;
-}
 
-SFPPlotter::~SFPPlotter() 
+	/*Generates storage and initializes pointers*/
-{
+	SFPPlotter::SFPPlotter()
-	delete event_address;
-}
-
-/*2D histogram fill wrapper*/
-void SFPPlotter::MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex,
-						int binsy, double miny, double maxy, double valuey)
-{
-	TH2F *histo = (TH2F*) table->FindObject(name.c_str());
-	if(histo != nullptr) 
-		histo->Fill(valuex, valuey);
-	else
 	{
-		TH2F *h = new TH2F(name.c_str(), name.c_str(), binsx, minx, maxx, binsy, miny, maxy);
+		event_address = new ProcessedEvent();
-		h->Fill(valuex, valuey);
+		m_pb = nullptr;
-		table->Add(h);
 	}
-}
-
-/*1D histogram fill wrapper*/
-void SFPPlotter::MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex)
-{
-	TH1F *histo = (TH1F*) table->FindObject(name.c_str());
-	if(histo != nullptr)
-		histo->Fill(valuex);
-	else 
-	{
-		TH1F *h = new TH1F(name.c_str(), name.c_str(), binsx, minx, maxx);
-		h->Fill(valuex);
-		table->Add(h);
-	}
-}
-
-/*Makes histograms where only rejection is unset data*/
-void SFPPlotter::MakeUncutHistograms(const ProcessedEvent& ev, THashTable* table)
-{
-	MyFill(table,"x1NoCuts_bothplanes",600,-300,300,ev.x2);
-	MyFill(table,"x2NoCuts_bothplanes",600,-300,300,ev.x2);
-	MyFill(table,"xavgNoCuts_bothplanes",600,-300,300,ev.xavg);
-	MyFill(table,"xavgNoCuts_theta_bothplanes",600,-300,300,ev.xavg,100,0,TMath::Pi()/2.,ev.theta);
 	
-	MyFill(table,"x1_delayBackRightE_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.delayBackRightE);
+	SFPPlotter::~SFPPlotter() 
-	MyFill(table,"x2_delayBackRightE_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.delayBackRightE);
-	MyFill(table,"xavg_delayBackRightE_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.delayBackRightE);
-	MyFill(table,"x1_x2_NoCuts",600,-300,300,ev.x1,600,-300,300,ev.x2);
-
-	Double_t delayBackAvgE = (ev.delayBackRightE+ev.delayBackLeftE)/2.0;
-	MyFill(table,"x1_delayBackAvgE_NoCuts",600,-300,300,ev.x1,512,0,4096,delayBackAvgE);
-	MyFill(table,"x2_delayBackAvgE_NoCuts",600,-300,300,ev.x2,512,0,4096,delayBackAvgE);
-	MyFill(table,"xavg_delayBackAvgE_NoCuts",600,-300,300,ev.xavg,512,0,4096,delayBackAvgE);
-	Double_t delayFrontAvgE = (ev.delayFrontRightE+ev.delayFrontLeftE)/2.0;
-	MyFill(table,"x1_delayFrontAvgE_NoCuts",600,-300,300,ev.x1,512,0,4096,delayFrontAvgE);
-	MyFill(table,"x2_delayFrontAvgE_NoCuts",600,-300,300,ev.x2,512,0,4096,delayFrontAvgE);
-	MyFill(table,"xavg_delayFrontAvgE_NoCuts",600,-300,300,ev.xavg,512,0,4096,delayFrontAvgE);
-
-	MyFill(table,"scintLeft_anodeBack_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeBack);
-	MyFill(table,"scintLeft_anodeFront_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeFront);
-	MyFill(table,"scintLeft_cathode_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.cathode);
-
-	MyFill(table,"x1_scintLeft_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.scintLeft);
-	MyFill(table,"x2_scintLeft_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.scintLeft);
-	MyFill(table,"xavg_scintLeft_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.scintLeft);
-
-	MyFill(table,"x1_anodeBack_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.anodeBack);
-	MyFill(table,"x2_anodeBack_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.anodeBack);
-	MyFill(table,"xavg_anodeBack_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.anodeBack);
-
-	MyFill(table,"x1_anodeFront_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.anodeFront);
-	MyFill(table,"x2_anodeFront_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.anodeFront);
-	MyFill(table,"xavg_anodeFront_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.anodeFront);
-
-	MyFill(table,"x1_cathode_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.cathode);
-	MyFill(table,"x2_cathode_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.cathode);
-	MyFill(table,"xavg_cathode_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.cathode);
-
-	/****Timing relative to back anode****/
-	if(ev.anodeBackTime != -1 && ev.scintLeftTime != -1)
 	{
-		Double_t anodeRelFT = ev.anodeFrontTime - ev.anodeBackTime;
+		delete event_address;
-		Double_t delayRelFT = ev.delayFrontMaxTime - ev.anodeBackTime;
+	}
-		Double_t delayRelBT = ev.delayBackMaxTime - ev.anodeBackTime;
+	
-		Double_t anodeRelBT = ev.anodeBackTime - ev.scintLeftTime;
+	/*2D histogram fill wrapper*/
-		Double_t delayRelFT_toScint = ev.delayFrontMaxTime - ev.scintLeftTime;
+	void SFPPlotter::MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex,
-		Double_t delayRelBT_toScint = ev.delayBackMaxTime - ev.scintLeftTime;
+							int binsy, double miny, double maxy, double valuey)
-		MyFill(table,"anodeRelFrontTime_NoCuts",1000,-3000,3500, anodeRelFT);
+	{
-		MyFill(table,"delayRelFrontTime_NoCuts",1000,-3000,-3500,delayRelFT);
+		TH2F *histo = (TH2F*) table->FindObject(name.c_str());
-		MyFill(table,"delayRelBackTime_NoCuts",1000,-3000,-3500,delayRelBT);
+		if(histo != nullptr) 
+			histo->Fill(valuex, valuey);
+		else
+		{
+			TH2F *h = new TH2F(name.c_str(), name.c_str(), binsx, minx, maxx, binsy, miny, maxy);
+			h->Fill(valuex, valuey);
+			table->Add(h);
+		}
+	}
+	
+	/*1D histogram fill wrapper*/
+	void SFPPlotter::MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex)
+	{
+		TH1F *histo = (TH1F*) table->FindObject(name.c_str());
+		if(histo != nullptr)
+			histo->Fill(valuex);
+		else 
+		{
+			TH1F *h = new TH1F(name.c_str(), name.c_str(), binsx, minx, maxx);
+			h->Fill(valuex);
+			table->Add(h);
+		}
+	}
+	
+	/*Makes histograms where only rejection is unset data*/
+	void SFPPlotter::MakeUncutHistograms(const ProcessedEvent& ev, THashTable* table)
+	{
+		MyFill(table,"x1NoCuts_bothplanes",600,-300,300,ev.x2);
+		MyFill(table,"x2NoCuts_bothplanes",600,-300,300,ev.x2);
+		MyFill(table,"xavgNoCuts_bothplanes",600,-300,300,ev.xavg);
+		MyFill(table,"xavgNoCuts_theta_bothplanes",600,-300,300,ev.xavg,100,0,TMath::Pi()/2.,ev.theta);
+		
+		MyFill(table,"x1_delayBackRightE_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.delayBackRightE);
+		MyFill(table,"x2_delayBackRightE_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.delayBackRightE);
+		MyFill(table,"xavg_delayBackRightE_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.delayBackRightE);
+		MyFill(table,"x1_x2_NoCuts",600,-300,300,ev.x1,600,-300,300,ev.x2);
+	
+		Double_t delayBackAvgE = (ev.delayBackRightE+ev.delayBackLeftE)/2.0;
+		MyFill(table,"x1_delayBackAvgE_NoCuts",600,-300,300,ev.x1,512,0,4096,delayBackAvgE);
+		MyFill(table,"x2_delayBackAvgE_NoCuts",600,-300,300,ev.x2,512,0,4096,delayBackAvgE);
+		MyFill(table,"xavg_delayBackAvgE_NoCuts",600,-300,300,ev.xavg,512,0,4096,delayBackAvgE);
+		Double_t delayFrontAvgE = (ev.delayFrontRightE+ev.delayFrontLeftE)/2.0;
+		MyFill(table,"x1_delayFrontAvgE_NoCuts",600,-300,300,ev.x1,512,0,4096,delayFrontAvgE);
+		MyFill(table,"x2_delayFrontAvgE_NoCuts",600,-300,300,ev.x2,512,0,4096,delayFrontAvgE);
+		MyFill(table,"xavg_delayFrontAvgE_NoCuts",600,-300,300,ev.xavg,512,0,4096,delayFrontAvgE);
+	
+		MyFill(table,"scintLeft_anodeBack_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeBack);
+		MyFill(table,"scintLeft_anodeFront_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeFront);
+		MyFill(table,"scintLeft_cathode_NoCuts",512,0,4096,ev.scintLeft,512,0,4096,ev.cathode);
+	
+		MyFill(table,"x1_scintLeft_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.scintLeft);
+		MyFill(table,"x2_scintLeft_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.scintLeft);
+		MyFill(table,"xavg_scintLeft_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.scintLeft);
+	
+		MyFill(table,"x1_anodeBack_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.anodeBack);
+		MyFill(table,"x2_anodeBack_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.anodeBack);
+		MyFill(table,"xavg_anodeBack_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.anodeBack);
+	
+		MyFill(table,"x1_anodeFront_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.anodeFront);
+		MyFill(table,"x2_anodeFront_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.anodeFront);
+		MyFill(table,"xavg_anodeFront_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.anodeFront);
+	
+		MyFill(table,"x1_cathode_NoCuts",600,-300,300,ev.x1,512,0,4096,ev.cathode);
+		MyFill(table,"x2_cathode_NoCuts",600,-300,300,ev.x2,512,0,4096,ev.cathode);
+		MyFill(table,"xavg_cathode_NoCuts",600,-300,300,ev.xavg,512,0,4096,ev.cathode);
+	
+		/****Timing relative to back anode****/
+		if(ev.anodeBackTime != -1 && ev.scintLeftTime != -1)
+		{
+			Double_t anodeRelFT = ev.anodeFrontTime - ev.anodeBackTime;
+			Double_t delayRelFT = ev.delayFrontMaxTime - ev.anodeBackTime;
+			Double_t delayRelBT = ev.delayBackMaxTime - ev.anodeBackTime;
+			Double_t anodeRelBT = ev.anodeBackTime - ev.scintLeftTime;
+			Double_t delayRelFT_toScint = ev.delayFrontMaxTime - ev.scintLeftTime;
+			Double_t delayRelBT_toScint = ev.delayBackMaxTime - ev.scintLeftTime;
+			MyFill(table,"anodeRelFrontTime_NoCuts",1000,-3000,3500, anodeRelFT);
+			MyFill(table,"delayRelFrontTime_NoCuts",1000,-3000,-3500,delayRelFT);
+			MyFill(table,"delayRelBackTime_NoCuts",1000,-3000,-3500,delayRelBT);
+			for(int i=0; i<5; i++) 
+			{
+				if(ev.sabreRingE[i] != -1)
+				{
+					Double_t sabreRelRT = ev.sabreRingTime[i] - ev.anodeBackTime;
+					Double_t sabreRelWT = ev.sabreWedgeTime[i] - ev.anodeBackTime;
+					Double_t sabreRelRT_toScint = ev.sabreRingTime[i] - ev.scintLeftTime;
+					Double_t sabreRelWT_toScint = ev.sabreWedgeTime[i] - ev.scintLeftTime;
+					MyFill(table,"xavg_sabrefcoinc_NoCuts",600,-300,300, ev.xavg);
+					MyFill(table,"sabreRelRingTime_NoCuts",1000,-3000,3500, sabreRelRT);
+					MyFill(table,"sabreRelWedgeTime_NoCuts",1000,-3000,3500, sabreRelWT);
+					MyFill(table,"sabreRelRingTime_toScint",1000,-3000,3500,sabreRelRT_toScint);
+					MyFill(table,"sabreRelWedgeTime_toScint",1000,-3000,3500,sabreRelWT_toScint);
+					MyFill(table,"sabreRelRTScint_sabreRelRTAnode",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,sabreRelRT);
+					MyFill(table,"sabreRelRTScint_sabreRingChannel",500,-3000,3500,sabreRelRT_toScint,144,0,144,ev.sabreRingChannel[i]);
+					MyFill(table,"sabreRelRTAnode_sabreRingChannel",500,-3000,3500,sabreRelRT,144,0,144,ev.sabreRingChannel[i]);
+					MyFill(table,"sabreRelWTScint_sabreWedgeChannel",500,-3000,3500,sabreRelWT_toScint,144,0,144,ev.sabreWedgeChannel[i]);
+					MyFill(table,"sabreRelRT_sabreRelWT",500,-3000,3500,sabreRelRT,500,-3000,3500,sabreRelWT);
+					MyFill(table,"sabreRelRT_sabreRelWT_scint",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,sabreRelWT_toScint);
+					MyFill(table,"sabreRelRTScint_anodeRelT",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,anodeRelBT);
+				}
+			}
+			MyFill(table,"anodeBackRelTime_toScint",1000,-3000,3500,anodeRelBT);
+			MyFill(table,"delayRelBackTime_toScint",1000,-3000,3500,delayRelBT_toScint);
+			MyFill(table,"delayRelFrontTime_toScint",1000,-3000,3500,delayRelFT_toScint);
+		} 
+		else
+			MyFill(table,"noscinttime_counter_NoCuts",2,0,1,1);
+		
+		for(int i=0; i<5; i++) 
+		{ 
+			if(ev.sabreRingE[i] != -1)  //Again, at this point front&back are required
+			{
+				MyFill(table,"sabreRingE_NoCuts",2000,0,20,ev.sabreRingE[i]);
+				MyFill(table,"sabreRingChannel_sabreRingE_NoCuts",144,0,144,ev.sabreRingChannel[i],200,0,20,ev.sabreRingE[i]);
+				MyFill(table,"sabreWedgeE_NoCuts",2000,0,20,ev.sabreWedgeE[i]);
+				MyFill(table,"sabreWedgeChannel_sabreWedgeE_NoCuts",144,0,144,ev.sabreWedgeChannel[i],200,0,20,ev.sabreWedgeE[i]);
+			}
+		}
+		
+		if(ev.x1 != -1e6 && ev.x2 == -1e6)
+			MyFill(table,"x1NoCuts_only1plane",600,-300,300,ev.x1);
+		else if(ev.x2 != -1e6 && ev.x1 == -1e6)
+			MyFill(table,"x2NoCuts_only1plane",600,-300,300,ev.x2);
+		else if(ev.x1 == -1e6 && ev.x2 == -1e6)
+			MyFill(table,"nopos_counter",2,0,1,1);
+	}
+	
+	/*Makes histograms with cuts & gates implemented*/
+	void SFPPlotter::MakeCutHistograms(const ProcessedEvent& ev, THashTable* table) 
+	{
+		if(!cutter.IsInside(&ev)) 
+			return;
+	
+		MyFill(table,"x1_bothplanes_Cut",600,-300,300,ev.x1);
+		MyFill(table,"x2_bothplanes_Cut",600,-300,300,ev.x2);
+		MyFill(table,"xavg_bothplanes_Cut",600,-300,300,ev.xavg);
+		MyFill(table,"x1_x2_Cut",600,-300,300,ev.x1, 600,-300,300,ev.x2);
+		MyFill(table,"xavg_theta_Cut_bothplanes",600,-300,300,ev.xavg,100,0,TMath::Pi()/2.,ev.theta);
+		
+		MyFill(table,"x1_delayBackRightE_Cut",600,-300,300,ev.x1,512,0,4096,ev.delayBackRightE);
+		MyFill(table,"x2_delayBackRightE_Cut",600,-300,300,ev.x2,512,0,4096,ev.delayBackRightE);
+		MyFill(table,"xavg_delayBackRightE_Cut",600,-300,300,ev.xavg,512,0,4096,ev.delayBackRightE);
+	
+		Double_t delayBackAvgE = (ev.delayBackRightE+ev.delayBackLeftE)/2.0;
+		MyFill(table,"x1_delayBackAvgE_Cut",600,-300,300,ev.x1,512,0,4096,delayBackAvgE);
+		MyFill(table,"x2_delayBackAvgE_Cut",600,-300,300,ev.x2,512,0,4096,delayBackAvgE);
+		MyFill(table,"xavg_delayBackAvgE_Cut",600,-300,300,ev.xavg,512,0,4096,delayBackAvgE);
+		Double_t delayFrontAvgE = (ev.delayFrontRightE+ev.delayFrontLeftE)/2.0;
+		MyFill(table,"x1_delayFrontAvgE_Cut",600,-300,300,ev.x1,512,0,4096,delayFrontAvgE);
+		MyFill(table,"x2_delayFrontAvgE_Cut",600,-300,300,ev.x2,512,0,4096,delayFrontAvgE);
+		MyFill(table,"xavg_delayFrontAvgE_Cut",600,-300,300,ev.xavg,512,0,4096,delayFrontAvgE);
+	
+		MyFill(table,"scintLeft_anodeBack_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeBack);
+		MyFill(table,"scintLeft_anodeFront_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeFront);
+		MyFill(table,"scintLeft_cathode_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.cathode);
+	
+		MyFill(table,"x1_scintLeft_Cut",600,-300,300,ev.x1,512,0,4096,ev.scintLeft);
+		MyFill(table,"x2_scintLeft_Cut",600,-300,300,ev.x2,512,0,4096,ev.scintLeft);
+		MyFill(table,"xavg_scintLeft_Cut",600,-300,300,ev.xavg,512,0,4096,ev.scintLeft);
+	
+		MyFill(table,"x1_anodeBack_Cut",600,-300,300,ev.x1,512,0,4096,ev.anodeBack);
+		MyFill(table,"x2_anodeBack_Cut",600,-300,300,ev.x2,512,0,4096,ev.anodeBack);
+		MyFill(table,"xavg_anodeBack_Cut",600,-300,300,ev.xavg,512,0,4096,ev.anodeBack);
+		
+		MyFill(table,"x1_anodeFront_Cut",600,-300,300,ev.x1,512,0,4096,ev.anodeFront);
+		MyFill(table,"x2_anodeFront_Cut",600,-300,300,ev.x2,512,0,4096,ev.anodeFront);
+		MyFill(table,"xavg_anodeFront_Cut",600,-300,300,ev.xavg,512,0,4096,ev.anodeFront);
+		
+		MyFill(table,"x1_cathode_Cut",600,-300,300,ev.x1,512,0,4096,ev.cathode);
+		MyFill(table,"x2_cathode_Cut",600,-300,300,ev.x2,512,0,4096,ev.cathode);
+		MyFill(table,"xavg_cathode_Cut",600,-300,300,ev.xavg,512,0,4096,ev.cathode);
+	
+		/****Timing relative to back anode****/
+		if(ev.anodeBackTime != -1 && ev.scintLeftTime != -1) 
+		{
+			Double_t anodeRelFT = ev.anodeFrontTime - ev.anodeBackTime;
+			Double_t anodeRelBT = ev.anodeBackTime - ev.anodeBackTime;
+			Double_t anodeRelFT_toScint = ev.anodeFrontTime-ev.scintLeftTime;
+			MyFill(table,"anodeRelBackTime_Cut",1000,-3000,3500, anodeRelBT);
+			MyFill(table,"anodeRelFrontTime_Cut",1000,-3000,3500, anodeRelFT);
+			MyFill(table,"anodeRelTime_toScint_Cut",1000,-3000,3500,anodeRelFT_toScint);
+			for(int i=0; i<5; i++) 
+			{
+				if(ev.sabreRingE[i] != -1) 
+				{
+					Double_t sabreRelRT = ev.sabreRingTime[i] - ev.anodeBackTime;
+					Double_t sabreRelWT = ev.sabreWedgeTime[i] - ev.anodeBackTime;
+					MyFill(table,"sabreRelRingTime_Cut",1000,-3000,3500, sabreRelRT);
+					MyFill(table,"sabreRelWedgeTime_Cut",1000,-3000,3500, sabreRelWT);
+				} 
+			}
+		} 
+		else
+		{
+			MyFill(table,"noscinttime_counter_Cut",2,0,1,1);
+		}
+		
 		for(int i=0; i<5; i++) 
 		{
 			if(ev.sabreRingE[i] != -1)
 			{
-				Double_t sabreRelRT = ev.sabreRingTime[i] - ev.anodeBackTime;
+				MyFill(table,"sabreRingE_Cut",2000,0,20,ev.sabreRingE[i]);
-				Double_t sabreRelWT = ev.sabreWedgeTime[i] - ev.anodeBackTime;
+				MyFill(table,"xavg_Cut_sabrefcoinc",600,-300,300,ev.xavg);
-				Double_t sabreRelRT_toScint = ev.sabreRingTime[i] - ev.scintLeftTime;
+				MyFill(table,"xavg_sabreRingE_Cut",600,-300,300,ev.xavg,200,0,20,ev.sabreRingE[i]);
-				Double_t sabreRelWT_toScint = ev.sabreWedgeTime[i] - ev.scintLeftTime;
+				MyFill(table,"sabreWedgeE_Cut",2000,0,20,ev.sabreWedgeE[i]);
-				MyFill(table,"xavg_sabrefcoinc_NoCuts",600,-300,300, ev.xavg);
+				MyFill(table,"xavg_sabreWedgeE_Cut",600,-300,300,ev.xavg,200,0,20,ev.sabreWedgeE[i]);
-				MyFill(table,"sabreRelRingTime_NoCuts",1000,-3000,3500, sabreRelRT);
-				MyFill(table,"sabreRelWedgeTime_NoCuts",1000,-3000,3500, sabreRelWT);
-				MyFill(table,"sabreRelRingTime_toScint",1000,-3000,3500,sabreRelRT_toScint);
-				MyFill(table,"sabreRelWedgeTime_toScint",1000,-3000,3500,sabreRelWT_toScint);
-				MyFill(table,"sabreRelRTScint_sabreRelRTAnode",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,sabreRelRT);
-				MyFill(table,"sabreRelRTScint_sabreRingChannel",500,-3000,3500,sabreRelRT_toScint,144,0,144,ev.sabreRingChannel[i]);
-				MyFill(table,"sabreRelRTAnode_sabreRingChannel",500,-3000,3500,sabreRelRT,144,0,144,ev.sabreRingChannel[i]);
-				MyFill(table,"sabreRelWTScint_sabreWedgeChannel",500,-3000,3500,sabreRelWT_toScint,144,0,144,ev.sabreWedgeChannel[i]);
-				MyFill(table,"sabreRelRT_sabreRelWT",500,-3000,3500,sabreRelRT,500,-3000,3500,sabreRelWT);
-				MyFill(table,"sabreRelRT_sabreRelWT_scint",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,sabreRelWT_toScint);
-				MyFill(table,"sabreRelRTScint_anodeRelT",500,-3000,3500,sabreRelRT_toScint,500,-3000,3500,anodeRelBT);
 			}
 		}
-		MyFill(table,"anodeBackRelTime_toScint",1000,-3000,3500,anodeRelBT);
-		MyFill(table,"delayRelBackTime_toScint",1000,-3000,3500,delayRelBT_toScint);
-		MyFill(table,"delayRelFrontTime_toScint",1000,-3000,3500,delayRelFT_toScint);
-	} 
-	else
-		MyFill(table,"noscinttime_counter_NoCuts",2,0,1,1);
-	
-	for(int i=0; i<5; i++) 
-	{ 
-		if(ev.sabreRingE[i] != -1)  //Again, at this point front&back are required
-		{
-			MyFill(table,"sabreRingE_NoCuts",2000,0,20,ev.sabreRingE[i]);
-			MyFill(table,"sabreRingChannel_sabreRingE_NoCuts",144,0,144,ev.sabreRingChannel[i],200,0,20,ev.sabreRingE[i]);
-			MyFill(table,"sabreWedgeE_NoCuts",2000,0,20,ev.sabreWedgeE[i]);
-			MyFill(table,"sabreWedgeChannel_sabreWedgeE_NoCuts",144,0,144,ev.sabreWedgeChannel[i],200,0,20,ev.sabreWedgeE[i]);
-		}
 	}
 	
-	if(ev.x1 != -1e6 && ev.x2 == -1e6)
+	/*Runs a list of files given from a RunCollector class*/
-		MyFill(table,"x1NoCuts_only1plane",600,-300,300,ev.x1);
+	void SFPPlotter::Run(const std::vector<std::string>& files, const std::string& output)
-	else if(ev.x2 != -1e6 && ev.x1 == -1e6)
-		MyFill(table,"x2NoCuts_only1plane",600,-300,300,ev.x2);
-	else if(ev.x1 == -1e6 && ev.x2 == -1e6)
-		MyFill(table,"nopos_counter",2,0,1,1);
-}
-
-/*Makes histograms with cuts & gates implemented*/
-void SFPPlotter::MakeCutHistograms(const ProcessedEvent& ev, THashTable* table) 
-{
-	if(!cutter.IsInside(&ev)) 
-		return;
-
-	MyFill(table,"x1_bothplanes_Cut",600,-300,300,ev.x1);
-	MyFill(table,"x2_bothplanes_Cut",600,-300,300,ev.x2);
-	MyFill(table,"xavg_bothplanes_Cut",600,-300,300,ev.xavg);
-	MyFill(table,"x1_x2_Cut",600,-300,300,ev.x1, 600,-300,300,ev.x2);
-	MyFill(table,"xavg_theta_Cut_bothplanes",600,-300,300,ev.xavg,100,0,TMath::Pi()/2.,ev.theta);
-	
-	MyFill(table,"x1_delayBackRightE_Cut",600,-300,300,ev.x1,512,0,4096,ev.delayBackRightE);
-	MyFill(table,"x2_delayBackRightE_Cut",600,-300,300,ev.x2,512,0,4096,ev.delayBackRightE);
-	MyFill(table,"xavg_delayBackRightE_Cut",600,-300,300,ev.xavg,512,0,4096,ev.delayBackRightE);
-
-	Double_t delayBackAvgE = (ev.delayBackRightE+ev.delayBackLeftE)/2.0;
-	MyFill(table,"x1_delayBackAvgE_Cut",600,-300,300,ev.x1,512,0,4096,delayBackAvgE);
-	MyFill(table,"x2_delayBackAvgE_Cut",600,-300,300,ev.x2,512,0,4096,delayBackAvgE);
-	MyFill(table,"xavg_delayBackAvgE_Cut",600,-300,300,ev.xavg,512,0,4096,delayBackAvgE);
-	Double_t delayFrontAvgE = (ev.delayFrontRightE+ev.delayFrontLeftE)/2.0;
-	MyFill(table,"x1_delayFrontAvgE_Cut",600,-300,300,ev.x1,512,0,4096,delayFrontAvgE);
-	MyFill(table,"x2_delayFrontAvgE_Cut",600,-300,300,ev.x2,512,0,4096,delayFrontAvgE);
-	MyFill(table,"xavg_delayFrontAvgE_Cut",600,-300,300,ev.xavg,512,0,4096,delayFrontAvgE);
-
-	MyFill(table,"scintLeft_anodeBack_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeBack);
-	MyFill(table,"scintLeft_anodeFront_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.anodeFront);
-	MyFill(table,"scintLeft_cathode_Cut",512,0,4096,ev.scintLeft,512,0,4096,ev.cathode);
-
-	MyFill(table,"x1_scintLeft_Cut",600,-300,300,ev.x1,512,0,4096,ev.scintLeft);
-	MyFill(table,"x2_scintLeft_Cut",600,-300,300,ev.x2,512,0,4096,ev.scintLeft);
-	MyFill(table,"xavg_scintLeft_Cut",600,-300,300,ev.xavg,512,0,4096,ev.scintLeft);
-
-	MyFill(table,"x1_anodeBack_Cut",600,-300,300,ev.x1,512,0,4096,ev.anodeBack);
-	MyFill(table,"x2_anodeBack_Cut",600,-300,300,ev.x2,512,0,4096,ev.anodeBack);
-	MyFill(table,"xavg_anodeBack_Cut",600,-300,300,ev.xavg,512,0,4096,ev.anodeBack);
-	
-	MyFill(table,"x1_anodeFront_Cut",600,-300,300,ev.x1,512,0,4096,ev.anodeFront);
-	MyFill(table,"x2_anodeFront_Cut",600,-300,300,ev.x2,512,0,4096,ev.anodeFront);
-	MyFill(table,"xavg_anodeFront_Cut",600,-300,300,ev.xavg,512,0,4096,ev.anodeFront);
-	
-	MyFill(table,"x1_cathode_Cut",600,-300,300,ev.x1,512,0,4096,ev.cathode);
-	MyFill(table,"x2_cathode_Cut",600,-300,300,ev.x2,512,0,4096,ev.cathode);
-	MyFill(table,"xavg_cathode_Cut",600,-300,300,ev.xavg,512,0,4096,ev.cathode);
-
-	/****Timing relative to back anode****/
-	if(ev.anodeBackTime != -1 && ev.scintLeftTime != -1) 
 	{
-		Double_t anodeRelFT = ev.anodeFrontTime - ev.anodeBackTime;
+		TFile *outfile = TFile::Open(output.c_str(), "RECREATE");
-		Double_t anodeRelBT = ev.anodeBackTime - ev.anodeBackTime;
+		TChain* chain = new TChain("SPSTree");
-		Double_t anodeRelFT_toScint = ev.anodeFrontTime-ev.scintLeftTime;
+		for(unsigned int i=0; i<files.size(); i++)
-		MyFill(table,"anodeRelBackTime_Cut",1000,-3000,3500, anodeRelBT);
+			chain->Add(files[i].c_str()); 
-		MyFill(table,"anodeRelFrontTime_Cut",1000,-3000,3500, anodeRelFT);
+		chain->SetBranchAddress("event", &event_address);
-		MyFill(table,"anodeRelTime_toScint_Cut",1000,-3000,3500,anodeRelFT_toScint);
+		THashTable* table = new THashTable();
-		for(int i=0; i<5; i++) 
+	
+		long blentries = chain->GetEntries();
+		if(m_pb) 
+			SetProgressBar(blentries);
+		std::cout<<"Total number of events: "<<blentries<<std::endl;
+	
+		long count=0, flush_val=blentries*0.01, flush_count=0;
+	
+		for(long i=0; i<chain->GetEntries(); i++) 
 		{
-			if(ev.sabreRingE[i] != -1) 
+			count++;
+			if(count == flush_val)
 			{
-				Double_t sabreRelRT = ev.sabreRingTime[i] - ev.anodeBackTime;
+				if(m_pb) {
-				Double_t sabreRelWT = ev.sabreWedgeTime[i] - ev.anodeBackTime;
+					m_pb->Increment(count);
-				MyFill(table,"sabreRelRingTime_Cut",1000,-3000,3500, sabreRelRT);
+					gSystem->ProcessEvents();
-				MyFill(table,"sabreRelWedgeTime_Cut",1000,-3000,3500, sabreRelWT);
+					count = 0;
-			} 
+				} else {
+					flush_count++;
+					count=0;
+					std::cout<<"\rPercent of data processed: "<<flush_count*10<<"%"<<std::flush;
+				}
+			}
+			chain->GetEntry(i);
+			MakeUncutHistograms(*event_address, table);
+			if(cutter.IsValid()) MakeCutHistograms(*event_address, table);
 		}
-	} 
+		std::cout<<std::endl;
-	else
+		outfile->cd();
-	{
+		table->Write();
-		MyFill(table,"noscinttime_counter_Cut",2,0,1,1);
+		if(cutter.IsValid()) 
+		{
+			auto clist = cutter.GetCuts();
+			for(unsigned int i=0; i<clist.size(); i++) 
+			  clist[i]->Write();
+		}
+		delete table;
+		outfile->Close();
+		delete outfile;
 	}
 	
-	for(int i=0; i<5; i++) 
+	
+	void SFPPlotter::SetProgressBar(long total) 
 	{
-		if(ev.sabreRingE[i] != -1)
+		m_pb->SetMax(total);
-		{
+		m_pb->SetMin(0);
-			MyFill(table,"sabreRingE_Cut",2000,0,20,ev.sabreRingE[i]);
+		m_pb->SetPosition(0);
-			MyFill(table,"xavg_Cut_sabrefcoinc",600,-300,300,ev.xavg);
+		gSystem->ProcessEvents();
-			MyFill(table,"xavg_sabreRingE_Cut",600,-300,300,ev.xavg,200,0,20,ev.sabreRingE[i]);
-			MyFill(table,"sabreWedgeE_Cut",2000,0,20,ev.sabreWedgeE[i]);
-			MyFill(table,"xavg_sabreWedgeE_Cut",600,-300,300,ev.xavg,200,0,20,ev.sabreWedgeE[i]);
-		}
 	}
-}
 
-/*Runs a list of files given from a RunCollector class*/
+}
-void SFPPlotter::Run(const std::vector<std::string>& files, const std::string& output)
-{
-	TFile *outfile = TFile::Open(output.c_str(), "RECREATE");
-	TChain* chain = new TChain("SPSTree");
-	for(unsigned int i=0; i<files.size(); i++)
-		chain->Add(files[i].c_str()); 
-	chain->SetBranchAddress("event", &event_address);
-	THashTable* table = new THashTable();
-
-	long blentries = chain->GetEntries();
-	if(m_pb) 
-		SetProgressBar(blentries);
-	std::cout<<"Total number of events: "<<blentries<<std::endl;
-
-	long count=0, flush_val=blentries*0.01, flush_count=0;
-
-	for(long i=0; i<chain->GetEntries(); i++) 
-	{
-		count++;
-		if(count == flush_val)
-		{
-			if(m_pb) {
-				m_pb->Increment(count);
-				gSystem->ProcessEvents();
-				count = 0;
-			} else {
-				flush_count++;
-				count=0;
-				std::cout<<"\rPercent of data processed: "<<flush_count*10<<"%"<<std::flush;
-			}
-		}
-		chain->GetEntry(i);
-		MakeUncutHistograms(*event_address, table);
-		if(cutter.IsValid()) MakeCutHistograms(*event_address, table);
-	}
-	std::cout<<std::endl;
-	outfile->cd();
-	table->Write();
-	if(cutter.IsValid()) 
-	{
-		auto clist = cutter.GetCuts();
-		for(unsigned int i=0; i<clist.size(); i++) 
-		  clist[i]->Write();
-	}
-	delete table;
-	outfile->Close();
-	delete outfile;
-}
-
-
-void SFPPlotter::SetProgressBar(long total) 
-{
-	m_pb->SetMax(total);
-	m_pb->SetMin(0);
-	m_pb->SetPosition(0);
-	gSystem->ProcessEvents();
-}

src/evb/SFPPlotter.h

@@ -13,33 +13,37 @@
 #include "CutHandler.h"
 #include <TGProgressBar.h>
 
-class SFPPlotter 
+namespace EventBuilder {
-{
-public:
-	SFPPlotter();
-	~SFPPlotter();
-	inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
-	inline void ApplyCutlist(const std::string& listname) { cutter.SetCuts(listname); }
-	void Run(const std::vector<std::string>& files, const std::string& output);
 
-private:
+	class SFPPlotter 
-	void SetProgressBar(long total);
+	{
-	void Chain(const std::vector<std::string>& files); //Form TChain
+	public:
-	void MakeUncutHistograms(const ProcessedEvent& ev, THashTable* table);
+		SFPPlotter();
-	void MakeCutHistograms(const ProcessedEvent& ev, THashTable* table);
+		~SFPPlotter();
-
+		inline void AttachProgressBar(TGProgressBar* pb) { m_pb = pb; }
-	/*Histogram fill wrapper functions*/
+		inline void ApplyCutlist(const std::string& listname) { cutter.SetCuts(listname); }
-	void MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex,
+		void Run(const std::vector<std::string>& files, const std::string& output);
-				int binsy, double miny, double maxy, double valuey);
-	void MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex);
-
-	ProcessedEvent *event_address;
-
-	/*Cuts*/
-	CutHandler cutter;
 	
-	TGProgressBar* m_pb; //GUI progress
+	private:
+		void SetProgressBar(long total);
+		void Chain(const std::vector<std::string>& files); //Form TChain
+		void MakeUncutHistograms(const ProcessedEvent& ev, THashTable* table);
+		void MakeCutHistograms(const ProcessedEvent& ev, THashTable* table);
+	
+		/*Histogram fill wrapper functions*/
+		void MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex,
+					int binsy, double miny, double maxy, double valuey);
+		void MyFill(THashTable* table, const std::string& name, int binsx, double minx, double maxx, double valuex);
+	
+		ProcessedEvent *event_address;
+	
+		/*Cuts*/
+		CutHandler cutter;
+		
+		TGProgressBar* m_pb; //GUI progress
+	
+	};
 
-};
+}
 
 #endif

src/evb/ShiftMap.cpp

@@ -12,70 +12,74 @@
 #include "EventBuilder.h"
 #include "ShiftMap.h"
 
-ShiftMap::ShiftMap() :
+namespace EventBuilder {
-	m_filename(""), m_validFlag(false)
-{
-}
 
-ShiftMap::ShiftMap(const std::string& filename) :
+	ShiftMap::ShiftMap() :
-	m_filename(filename), m_validFlag(false)
+		m_filename(""), m_validFlag(false)
-{
-	ParseFile();
-}
-
-ShiftMap::~ShiftMap() {}
-
-void ShiftMap::SetFile(const std::string& filename) 
-{
-	m_filename = filename;
-	ParseFile();
-}
-
-uint64_t ShiftMap::GetShift(int gchan) 
-{
-	if(!m_validFlag)
-		return 0;
-	
-	auto iter = m_map.find(gchan);
-	if(iter == m_map.end())
-		return 0;
-	else 
-		return iter->second;
-}
-
-void ShiftMap::ParseFile() 
-{
-	m_validFlag = false;
-	std::ifstream input(m_filename);
-	if(!input.is_open()) 
-		return;
-
-	int board, channel, gchan;
-	uint64_t shift;
-	std::string junk, temp;
-
-	std::getline(input, junk);
-	std::getline(input, junk);
-
-	while(input>>board) 
 	{
-		input>>temp;
+	}
-		input>>shift;
+	
-		if(temp == "all") //keyword to set all channels in this board to same shift
+	ShiftMap::ShiftMap(const std::string& filename) :
-		{ 
+		m_filename(filename), m_validFlag(false)
-			for(int i=0; i<16; i++) 
+	{
+		ParseFile();
+	}
+	
+	ShiftMap::~ShiftMap() {}
+	
+	void ShiftMap::SetFile(const std::string& filename) 
+	{
+		m_filename = filename;
+		ParseFile();
+	}
+	
+	uint64_t ShiftMap::GetShift(int gchan) 
+	{
+		if(!m_validFlag)
+			return 0;
+		
+		auto iter = m_map.find(gchan);
+		if(iter == m_map.end())
+			return 0;
+		else 
+			return iter->second;
+	}
+	
+	void ShiftMap::ParseFile() 
+	{
+		m_validFlag = false;
+		std::ifstream input(m_filename);
+		if(!input.is_open()) 
+			return;
+	
+		int board, channel, gchan;
+		uint64_t shift;
+		std::string junk, temp;
+	
+		std::getline(input, junk);
+		std::getline(input, junk);
+	
+		while(input>>board) 
+		{
+			input>>temp;
+			input>>shift;
+			if(temp == "all") //keyword to set all channels in this board to same shift
+			{ 
+				for(int i=0; i<16; i++) 
+				{
+					gchan = board*16 + i;
+					m_map[gchan] = shift;
+				}
+			}
+			else 
 			{
-				gchan = board*16 + i;
+				channel = stoi(temp);
+				gchan = channel + board*16;
 				m_map[gchan] = shift;
 			}
 		}
-		else 
+	
-		{
+		m_validFlag = true;
-			channel = stoi(temp);
-			gchan = channel + board*16;
-			m_map[gchan] = shift;
-		}
 	}
 
-	m_validFlag = true;
+}
-}

src/evb/ShiftMap.h

@@ -12,25 +12,29 @@
 #ifndef SHIFTMAP_H
 #define SHIFTMAP_H
 
-class ShiftMap 
+namespace EventBuilder {
-{
-public:
-	ShiftMap();
-	ShiftMap(const std::string& filename);
-	~ShiftMap();
-	void SetFile(const std::string& filename);
-	inline bool IsValid() { return m_validFlag; }
-	inline std::string GetFilename() { return m_filename; }
-	uint64_t GetShift(int gchan);
 
-private:
+	class ShiftMap 
-	void ParseFile();
+	{
+	public:
+		ShiftMap();
+		ShiftMap(const std::string& filename);
+		~ShiftMap();
+		void SetFile(const std::string& filename);
+		inline bool IsValid() { return m_validFlag; }
+		inline std::string GetFilename() { return m_filename; }
+		uint64_t GetShift(int gchan);
+	
+	private:
+		void ParseFile();
+	
+		std::string m_filename;
+		bool m_validFlag;
+	
+		std::unordered_map<int, uint64_t> m_map;
+	
+	};
 
-	std::string m_filename;
+}
-	bool m_validFlag;
-
-	std::unordered_map<int, uint64_t> m_map;
-
-};
 
 #endif

src/evb/SlowSort.cpp

@@ -10,171 +10,175 @@
 #include "EventBuilder.h"
 #include "SlowSort.h"
 
-/*Sort the Sabre Data in order of descending energy*/
+namespace EventBuilder {
-bool SabreSort(const DetectorHit& i, const DetectorHit& j) {
-  return (i.Long>j.Long);
-}
 
-/*Constructor takes input of coincidence window size, and fills sabre channel map*/
+	/*Sort the Sabre Data in order of descending energy*/
-SlowSort::SlowSort() :
+	bool SabreSort(const DetectorHit& i, const DetectorHit& j) {
-	m_coincWindow(-1.0), m_eventFlag(false)
+	  return (i.Long>j.Long);
-{
-	event_stats = new TH2F("coinc_event_stats","coinc_events_stats;global channel;number of coincident hits;counts",144,0,144,20,0,20);
-}
-
-SlowSort::SlowSort(double windowSize, const std::string& mapfile) :
-	m_coincWindow(windowSize), m_eventFlag(false), m_event(), cmap(mapfile)
-{
-	event_stats = new TH2F("coinc_event_stats","coinc_events_stats;global channel;number of coincident hits;counts",144,0,144,20,0,20);
-	InitVariableMaps();
-}
-
-SlowSort::~SlowSort() {}
-
-/**EXPERIMENT MODS go here**/
-void SlowSort::InitVariableMaps() 
-{
-
-	/*For SABRE: Each SABRE det has ring&wedge, so add the detID to the
-	  SABRERING/WEDGE attribute to differentiate*/
-	varMap[DetAttribute::SabreRing0] = &m_event.sabreArray[0].rings;
-	varMap[DetAttribute::SabreRing1] = &m_event.sabreArray[1].rings;
-	varMap[DetAttribute::SabreRing2] = &m_event.sabreArray[2].rings;
-	varMap[DetAttribute::SabreRing3] = &m_event.sabreArray[3].rings;
-	varMap[DetAttribute::SabreRing4] = &m_event.sabreArray[4].rings;
-	varMap[DetAttribute::SabreWedge0] = &m_event.sabreArray[0].wedges;
-	varMap[DetAttribute::SabreWedge1] = &m_event.sabreArray[1].wedges;
-	varMap[DetAttribute::SabreWedge2] = &m_event.sabreArray[2].wedges;
-	varMap[DetAttribute::SabreWedge3] = &m_event.sabreArray[3].wedges;
-	varMap[DetAttribute::SabreWedge4] = &m_event.sabreArray[4].wedges;
-
-	/*For focal plane: Only one focal plane, so each variable is uniquely
-	  identified by its attribute
-	*/
-	varMap[DetAttribute::ScintLeft] = &m_event.focalPlane.scintL;
-	varMap[DetAttribute::ScintRight] = &m_event.focalPlane.scintR;
-	varMap[DetAttribute::Cathode] = &m_event.focalPlane.cathode;
-	varMap[DetAttribute::DelayFR] = &m_event.focalPlane.delayFR;
-	varMap[DetAttribute::DelayFL] = &m_event.focalPlane.delayFL;
-	varMap[DetAttribute::DelayBL] = &m_event.focalPlane.delayBL;
-	varMap[DetAttribute::DelayBR] = &m_event.focalPlane.delayBR;
-	varMap[DetAttribute::AnodeFront] = &m_event.focalPlane.anodeF;
-	varMap[DetAttribute::AnodeBack] = &m_event.focalPlane.anodeB;
-	varMap[DetAttribute::Monitor] = &m_event.focalPlane.monitor;
-
-}
-
-/*Reset output structure to blank*/
-void SlowSort::Reset() 
-{
-	m_event = m_blank;
-}
-
-bool SlowSort::AddHitToEvent(CompassHit& mhit) 
-{
-	DPPChannel curHit;
-	curHit.Timestamp = mhit.timestamp;
-	curHit.Energy = mhit.lgate;
-	curHit.EnergyShort = mhit.sgate;
-	curHit.Channel = mhit.channel;
-	curHit.Board = mhit.board;
-	curHit.Flags = mhit.flags;
-
-	if(m_hitList.empty()) 
-	{
-		startTime = curHit.Timestamp;
-		m_hitList.push_back(curHit);
-	} 
-	else if (curHit.Timestamp < previousHitTime)
-		return false;
-	else if ((curHit.Timestamp - startTime) < m_coincWindow)
-		m_hitList.push_back(curHit);
-	else 
-	{
-		ProcessEvent();
-		m_hitList.clear();
-		startTime = curHit.Timestamp;
-		m_hitList.push_back(curHit);
-		m_eventFlag = true;
 	}
-
+	
-	return true;
+	/*Constructor takes input of coincidence window size, and fills sabre channel map*/
-}
+	SlowSort::SlowSort() :
-
+		m_coincWindow(-1.0), m_eventFlag(false)
-void SlowSort::FlushHitsToEvent()
-{
-	if(m_hitList.empty())
 	{
-		m_eventFlag = false;
+		event_stats = new TH2F("coinc_event_stats","coinc_events_stats;global channel;number of coincident hits;counts",144,0,144,20,0,20);
-		return;
 	}
-
+	
-	ProcessEvent();
+	SlowSort::SlowSort(double windowSize, const std::string& mapfile) :
-	m_hitList.clear();
+		m_coincWindow(windowSize), m_eventFlag(false), m_event(), cmap(mapfile)
-	m_eventFlag = true;
-}
-
-const CoincEvent& SlowSort::GetEvent()
-{
-	m_eventFlag = false;
-	return m_event;
-}
-
-/*Function called when an event outside the coincidence window is detected
- *Process all of the hits in the list, and write them to the sorted tree
- */
-void SlowSort::ProcessEvent()
-{
-	Reset();
-	DetectorHit dhit;
-	int gchan;
-	int size = m_hitList.size();
-	for(DPPChannel& curHit: m_hitList)
 	{
-		gchan = curHit.Channel + curHit.Board*16; //global channel
+		event_stats = new TH2F("coinc_event_stats","coinc_events_stats;global channel;number of coincident hits;counts",144,0,144,20,0,20);
-		event_stats->Fill(gchan, size);
+		InitVariableMaps();
-		dhit.Time = curHit.Timestamp/1.0e3;
+	}
-		dhit.Ch = gchan;
+	
-		dhit.Long = curHit.Energy;
+	SlowSort::~SlowSort() {}
-		dhit.Short = curHit.EnergyShort;
+	
-		auto channel_info = cmap.FindChannel(gchan);
+	/**EXPERIMENT MODS go here**/
-
+	void SlowSort::InitVariableMaps() 
-		if(channel_info == cmap.End())
+	{
+	
+		/*For SABRE: Each SABRE det has ring&wedge, so add the detID to the
+		  SABRERING/WEDGE attribute to differentiate*/
+		varMap[DetAttribute::SabreRing0] = &m_event.sabreArray[0].rings;
+		varMap[DetAttribute::SabreRing1] = &m_event.sabreArray[1].rings;
+		varMap[DetAttribute::SabreRing2] = &m_event.sabreArray[2].rings;
+		varMap[DetAttribute::SabreRing3] = &m_event.sabreArray[3].rings;
+		varMap[DetAttribute::SabreRing4] = &m_event.sabreArray[4].rings;
+		varMap[DetAttribute::SabreWedge0] = &m_event.sabreArray[0].wedges;
+		varMap[DetAttribute::SabreWedge1] = &m_event.sabreArray[1].wedges;
+		varMap[DetAttribute::SabreWedge2] = &m_event.sabreArray[2].wedges;
+		varMap[DetAttribute::SabreWedge3] = &m_event.sabreArray[3].wedges;
+		varMap[DetAttribute::SabreWedge4] = &m_event.sabreArray[4].wedges;
+	
+		/*For focal plane: Only one focal plane, so each variable is uniquely
+		  identified by its attribute
+		*/
+		varMap[DetAttribute::ScintLeft] = &m_event.focalPlane.scintL;
+		varMap[DetAttribute::ScintRight] = &m_event.focalPlane.scintR;
+		varMap[DetAttribute::Cathode] = &m_event.focalPlane.cathode;
+		varMap[DetAttribute::DelayFR] = &m_event.focalPlane.delayFR;
+		varMap[DetAttribute::DelayFL] = &m_event.focalPlane.delayFL;
+		varMap[DetAttribute::DelayBL] = &m_event.focalPlane.delayBL;
+		varMap[DetAttribute::DelayBR] = &m_event.focalPlane.delayBR;
+		varMap[DetAttribute::AnodeFront] = &m_event.focalPlane.anodeF;
+		varMap[DetAttribute::AnodeBack] = &m_event.focalPlane.anodeB;
+		varMap[DetAttribute::Monitor] = &m_event.focalPlane.monitor;
+	
+	}
+	
+	/*Reset output structure to blank*/
+	void SlowSort::Reset() 
+	{
+		m_event = m_blank;
+	}
+	
+	bool SlowSort::AddHitToEvent(CompassHit& mhit) 
+	{
+		DPPChannel curHit;
+		curHit.Timestamp = mhit.timestamp;
+		curHit.Energy = mhit.lgate;
+		curHit.EnergyShort = mhit.sgate;
+		curHit.Channel = mhit.channel;
+		curHit.Board = mhit.board;
+		curHit.Flags = mhit.flags;
+	
+		if(m_hitList.empty()) 
 		{
-			std::cout<<std::endl;
+			startTime = curHit.Timestamp;
-			std::cout<<"------Data Assignment Error!-------"<<std::endl;
+			m_hitList.push_back(curHit);
-			std::cout<<"Global channel number "<<gchan<<" found in data stream, but not assigned in ChannelMap!"<<std::endl;
-			std::cout<<"Skipping this hit..."<<std::endl;
-			std::cout<<"-----------------------------------"<<std::endl;
-			continue;
-		}
-		  
-		if(channel_info->second.type == DetType::FocalPlane)
-		{
-		  auto variable = varMap.find(channel_info->second.attribute);
-		  if(variable !=  varMap.end())
-		    variable->second->push_back(dhit);
 		} 
-		else if(channel_info->second.type == DetType::Sabre)
+		else if (curHit.Timestamp < previousHitTime)
-		{
+			return false;
-			auto variable = varMap.find(channel_info->second.attribute);
+		else if ((curHit.Timestamp - startTime) < m_coincWindow)
-			if(variable != varMap.end())
+			m_hitList.push_back(curHit);
-				variable->second->push_back(dhit);
-		}
 		else 
 		{
-			std::cout<<std::endl;
+			ProcessEvent();
-			std::cout<<"------Data Assignment Error!-------"<<std::endl;
+			m_hitList.clear();
-			std::cout<<"Channel is present in channel map, but does not have a variable assigned in variable map!"<<std::endl;
+			startTime = curHit.Timestamp;
-			std::cout<<"global channel number: "<<gchan<<" channel detector type: "<<channel_info->second.type<<" attribute: "<<channel_info->second.attribute<<std::endl;
+			m_hitList.push_back(curHit);
-			std::cout<<"Skipping this hit..."<<std::endl;
+			m_eventFlag = true;
-			std::cout<<"-----------------------------------"<<std::endl;
+		}
+	
+		return true;
+	}
+	
+	void SlowSort::FlushHitsToEvent()
+	{
+		if(m_hitList.empty())
+		{
+			m_eventFlag = false;
+			return;
+		}
+	
+		ProcessEvent();
+		m_hitList.clear();
+		m_eventFlag = true;
+	}
+	
+	const CoincEvent& SlowSort::GetEvent()
+	{
+		m_eventFlag = false;
+		return m_event;
+	}
+	
+	/*Function called when an event outside the coincidence window is detected
+	 *Process all of the hits in the list, and write them to the sorted tree
+	 */
+	void SlowSort::ProcessEvent()
+	{
+		Reset();
+		DetectorHit dhit;
+		int gchan;
+		int size = m_hitList.size();
+		for(DPPChannel& curHit: m_hitList)
+		{
+			gchan = curHit.Channel + curHit.Board*16; //global channel
+			event_stats->Fill(gchan, size);
+			dhit.Time = curHit.Timestamp/1.0e3;
+			dhit.Ch = gchan;
+			dhit.Long = curHit.Energy;
+			dhit.Short = curHit.EnergyShort;
+			auto channel_info = cmap.FindChannel(gchan);
+	
+			if(channel_info == cmap.End())
+			{
+				std::cout<<std::endl;
+				std::cout<<"------Data Assignment Error!-------"<<std::endl;
+				std::cout<<"Global channel number "<<gchan<<" found in data stream, but not assigned in ChannelMap!"<<std::endl;
+				std::cout<<"Skipping this hit..."<<std::endl;
+				std::cout<<"-----------------------------------"<<std::endl;
+				continue;
+			}
+			  
+			if(channel_info->second.type == DetType::FocalPlane)
+			{
+			  auto variable = varMap.find(channel_info->second.attribute);
+			  if(variable !=  varMap.end())
+			    variable->second->push_back(dhit);
+			} 
+			else if(channel_info->second.type == DetType::Sabre)
+			{
+				auto variable = varMap.find(channel_info->second.attribute);
+				if(variable != varMap.end())
+					variable->second->push_back(dhit);
+			}
+			else 
+			{
+				std::cout<<std::endl;
+				std::cout<<"------Data Assignment Error!-------"<<std::endl;
+				std::cout<<"Channel is present in channel map, but does not have a variable assigned in variable map!"<<std::endl;
+				std::cout<<"global channel number: "<<gchan<<" channel detector type: "<<channel_info->second.type<<" attribute: "<<channel_info->second.attribute<<std::endl;
+				std::cout<<"Skipping this hit..."<<std::endl;
+				std::cout<<"-----------------------------------"<<std::endl;
+			}
+		}
+		//Organize the SABRE data in descending energy order
+		for(int s=0; s<5; s++)
+		{
+			sort(m_event.sabreArray[s].rings.begin(), m_event.sabreArray[s].rings.end(), SabreSort);
+			sort(m_event.sabreArray[s].wedges.begin(), m_event.sabreArray[s].wedges.end(), SabreSort);
 		}
 	}
-	//Organize the SABRE data in descending energy order
+
-	for(int s=0; s<5; s++)
+}
-	{
-		sort(m_event.sabreArray[s].rings.begin(), m_event.sabreArray[s].rings.end(), SabreSort);
-		sort(m_event.sabreArray[s].wedges.begin(), m_event.sabreArray[s].wedges.end(), SabreSort);
-	}
-}

src/evb/SlowSort.h

@@ -16,39 +16,43 @@
 #include <TH2.h>
 #include <unordered_map>
 
-class SlowSort 
+namespace EventBuilder {
-{
 
-public:
+	class SlowSort 
-	SlowSort();
+	{
-	SlowSort(double windowSize, const std::string& mapfile);
-	~SlowSort();
-	inline void SetWindowSize(double window) { m_coincWindow = window; }
-	inline bool SetMapFile(const std::string& mapfile) { return cmap.FillMap(mapfile); }
-	bool AddHitToEvent(CompassHit& mhit);
-	const CoincEvent& GetEvent();
-	inline TH2F* GetEventStats() { return event_stats; }
-	void FlushHitsToEvent(); //For use with *last* hit list
-	inline bool IsEventReady() { return m_eventFlag; }
-
-private:
-	void InitVariableMaps();
-	void Reset();
-	void ProcessEvent();
-
-	double m_coincWindow;
-	std::vector<DPPChannel> m_hitList;
-	bool m_eventFlag;
-	CoincEvent m_event;
-	CoincEvent m_blank;
 	
-	double startTime, previousHitTime;    
+	public:
-	std::unordered_map<DetAttribute, std::vector<DetectorHit>*> varMap;
+		SlowSort();
+		SlowSort(double windowSize, const std::string& mapfile);
+		~SlowSort();
+		inline void SetWindowSize(double window) { m_coincWindow = window; }
+		inline bool SetMapFile(const std::string& mapfile) { return cmap.FillMap(mapfile); }
+		bool AddHitToEvent(CompassHit& mhit);
+		const CoincEvent& GetEvent();
+		inline TH2F* GetEventStats() { return event_stats; }
+		void FlushHitsToEvent(); //For use with *last* hit list
+		inline bool IsEventReady() { return m_eventFlag; }
+	
+	private:
+		void InitVariableMaps();
+		void Reset();
+		void ProcessEvent();
+	
+		double m_coincWindow;
+		std::vector<DPPChannel> m_hitList;
+		bool m_eventFlag;
+		CoincEvent m_event;
+		CoincEvent m_blank;
+		
+		double startTime, previousHitTime;    
+		std::unordered_map<DetAttribute, std::vector<DetectorHit>*> varMap;
+	
+		TH2F* event_stats;
+	
+		ChannelMap cmap;
+	 
+	};
 
-	TH2F* event_stats;
+}
-
-	ChannelMap cmap;
- 
-};
 
 #endif

src/evb/Stopwatch.cpp

@@ -8,30 +8,34 @@
 #include "EventBuilder.h"
 #include "Stopwatch.h"
 
-Stopwatch::Stopwatch() 
+namespace EventBuilder {
-{
-	start_time = Clock::now();
-	stop_time = start_time;
-}
 
-Stopwatch::~Stopwatch() {}
+	Stopwatch::Stopwatch() 
+	{
+		start_time = Clock::now();
+		stop_time = start_time;
+	}
+	
+	Stopwatch::~Stopwatch() {}
+	
+	void Stopwatch::Start() 
+	{
+		start_time = Clock::now();
+	}
+	
+	void Stopwatch::Stop() 
+	{
+		stop_time = Clock::now();
+	}
+	
+	double Stopwatch::GetElapsedSeconds() 
+	{
+		return std::chrono::duration_cast<std::chrono::duration<double>>(stop_time-start_time).count();
+	}
+	
+	double Stopwatch::GetElapsedMilliseconds() 
+	{
+		return std::chrono::duration_cast<std::chrono::duration<double>>(stop_time-start_time).count()*1000.0;
+	}
 
-void Stopwatch::Start() 
-{
-	start_time = Clock::now();
-}
-
-void Stopwatch::Stop() 
-{
-	stop_time = Clock::now();
-}
-
-double Stopwatch::GetElapsedSeconds() 
-{
-	return std::chrono::duration_cast<std::chrono::duration<double>>(stop_time-start_time).count();
-}
-
-double Stopwatch::GetElapsedMilliseconds() 
-{
-	return std::chrono::duration_cast<std::chrono::duration<double>>(stop_time-start_time).count()*1000.0;
 }

src/evb/Stopwatch.h

@@ -10,21 +10,25 @@
 
 #include <chrono>
 
-class Stopwatch 
+namespace EventBuilder {
-{
-public:
-	Stopwatch();
-	~Stopwatch();
-	void Start();
-	void Stop();
-	double GetElapsedSeconds();
-	double GetElapsedMilliseconds();
 
-private:
+	class Stopwatch 
-	using Time = std::chrono::high_resolution_clock::time_point;
+	{
-	using Clock = std::chrono::high_resolution_clock;
+	public:
+		Stopwatch();
+		~Stopwatch();
+		void Start();
+		void Stop();
+		double GetElapsedSeconds();
+		double GetElapsedMilliseconds();
+	
+	private:
+		using Time = std::chrono::high_resolution_clock::time_point;
+		using Clock = std::chrono::high_resolution_clock;
+	
+		Time start_time, stop_time;
+	};
 
-	Time start_time, stop_time;
+}
-};
 
 #endif

src/gui_main.cpp

@@ -1,7 +1,7 @@
-#include "EventBuilder.h"
+#include "evb/EventBuilder.h"
 #include "spsdict/DataStructs.h"
 #include <TApplication.h>
-#include "EVBMainFrame.h"
+#include "guidict/EVBMainFrame.h"
 
 int main(int argc, char** argv) 
 {

src/guidict/EVBMainFrame.cpp

@@ -142,13 +142,13 @@ EVBMainFrame::EVBMainFrame(const TGWindow* p, UInt_t w, UInt_t h) :
 	TGLabel *typelabel = new TGLabel(RunFrame, "Operation Type:");
 	fTypeBox = new TGComboBox(RunFrame, TypeBox);
 	//Needs modification for new conversion based sorting GWM -- Dec 2020
-	fTypeBox->AddEntry("Convert Slow", EVBApp::Operation::ConvertSlow);
+	fTypeBox->AddEntry("Convert Slow", EventBuilder::EVBApp::Operation::ConvertSlow);
-	fTypeBox->AddEntry("Convert Fast", EVBApp::Operation::ConvertFast);
+	fTypeBox->AddEntry("Convert Fast", EventBuilder::EVBApp::Operation::ConvertFast);
-	fTypeBox->AddEntry("Convert SlowA", EVBApp::Operation::ConvertSlowA);
+	fTypeBox->AddEntry("Convert SlowA", EventBuilder::EVBApp::Operation::ConvertSlowA);
-	fTypeBox->AddEntry("Convert FastA", EVBApp::Operation::ConvertFastA);
+	fTypeBox->AddEntry("Convert FastA", EventBuilder::EVBApp::Operation::ConvertFastA);
-	fTypeBox->AddEntry("Convert", EVBApp::Operation::Convert);
+	fTypeBox->AddEntry("Convert", EventBuilder::EVBApp::Operation::Convert);
-	fTypeBox->AddEntry("Merge ROOT", EVBApp::Operation::Merge);
+	fTypeBox->AddEntry("Merge ROOT", EventBuilder::EVBApp::Operation::Merge);
-	fTypeBox->AddEntry("Plot", EVBApp::Operation::Plot);
+	fTypeBox->AddEntry("Plot", EventBuilder::EVBApp::Operation::Plot);
 	fTypeBox->Resize(200,20);
 	fTypeBox->Connect("Selected(Int_t, Int_t)","EVBMainFrame",this,"HandleTypeSelection(Int_t,Int_t)");
 	TGLabel *rminlabel = new TGLabel(RunFrame, "Min Run:");
@@ -256,37 +256,37 @@ void EVBMainFrame::DoRun()
 
 	switch(type)
 	{
-		case EVBApp::Operation::Plot :
+		case EventBuilder::EVBApp::Operation::Plot :
 		{
 			RunPlot();
 			break;
 		}
-		case EVBApp::Operation::Convert :
+		case EventBuilder::EVBApp::Operation::Convert :
 		{
 			fBuilder.Convert2RawRoot();
 			break;
 		}
-		case EVBApp::Operation::Merge :
+		case EventBuilder::EVBApp::Operation::Merge :
 		{
 			fBuilder.MergeROOTFiles();
 			break;
 		}
-		case EVBApp::Operation::ConvertSlow :
+		case EventBuilder::EVBApp::Operation::ConvertSlow :
 		{
 			fBuilder.Convert2SortedRoot();
 			break;
 		}
-		case EVBApp::Operation::ConvertFast :
+		case EventBuilder::EVBApp::Operation::ConvertFast :
 		{
 			fBuilder.Convert2FastSortedRoot();
 			break;
 		}
-		case EVBApp::Operation::ConvertSlowA :
+		case EventBuilder::EVBApp::Operation::ConvertSlowA :
 		{
 			fBuilder.Convert2SlowAnalyzedRoot();
 			break;
 		}
-		case EVBApp::Operation::ConvertFastA :
+		case EventBuilder::EVBApp::Operation::ConvertFastA :
 		{
 			fBuilder.Convert2FastAnalyzedRoot();
 			break;

src/guidict/EVBMainFrame.h

@@ -94,7 +94,7 @@ private:
 
 	TGPopupMenu *fFileMenu;
 
-	EVBApp fBuilder;
+	EventBuilder::EVBApp fBuilder;
 
 	int counter;
 	UInt_t MAIN_W, MAIN_H;

src/main.cpp

@@ -1,7 +1,7 @@
-#include "EventBuilder.h"
+#include "evb/EventBuilder.h"
 #include "spsdict/DataStructs.h"
-#include "EVBApp.h"
+#include "evb/EVBApp.h"
-#include "Stopwatch.h"
+#include "evb/Stopwatch.h"
 
 int main(int argc, char** argv) 
 {
@@ -27,11 +27,11 @@ int main(int argc, char** argv)
 		Plot (generate a default histogram file from analyzed data)
 	*/
 
-	EVBApp theBuilder;
+	EventBuilder::EVBApp theBuilder;
 
 	theBuilder.ReadConfigFile(filename);
 
-	Stopwatch timer;
+	EventBuilder::Stopwatch timer;
 	timer.Start();
 	if(operation == "Convert")
 		theBuilder.Convert2RawRoot();