From 3b70b279e759cd25180b811493a674b9966b0d0d Mon Sep 17 00:00:00 2001
From: vsitaraman <vs19g@fsu.edu>
Date: Wed, 20 May 2026 15:03:46 -0400
Subject: [PATCH] 	modified:   run_17F.sh 	modified:   run_tr.sh

---
 run_17F.sh | 13 +++++++++++--
 run_tr.sh  |  6 +++---
 2 files changed, 14 insertions(+), 5 deletions(-)

diff --git a/run_17F.sh b/run_17F.sh
index bd672dc..85f75b7 100644
--- a/run_17F.sh
+++ b/run_17F.sh
@@ -4,6 +4,7 @@ export flip180="0"
 export flipa=0
 export anode_offset=2
 export cathode_offset=0
+export productionrun=1
 #root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_005_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run05.root;
 #root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_006_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run06.root;
 #root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_007_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run07.root;
@@ -29,11 +30,19 @@ export cathode_offset=0
 #17F reaction data
 # export flip180="0"
 declare -i run=322 #49
-while [[ $run -lt 399 ]]; do #392
+# while [[ $run -lt 399 ]]; do #392
+#     wrun=$(printf "%03d" $run)
+#     file_exists=$(test -f ../ANASEN_analysis/data/17F_Data/Run_"$wrun"_mapped.root)
+#     if [[ $file_exists -ne 0 ]]; then continue; fi
+#     root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Run_"$wrun"_mapped.root -e 'tree->Process("MakeVertex.C+O","Analyzer_17F.root")'; mv Analyzer_17F.root 17F_output/results_run$wrun.root;
+#     run=run+1
+# done
+
+while [[ $run -lt 323 ]]; do #392
     wrun=$(printf "%03d" $run)
     file_exists=$(test -f ../ANASEN_analysis/data/17F_Data/Run_"$wrun"_mapped.root)
     if [[ $file_exists -ne 0 ]]; then continue; fi
-    root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Run_"$wrun"_mapped.root -e 'tree->Process("MakeVertex.C+O","Analyzer_17F.root")'; mv Analyzer_17F.root 17F_output/results_run$wrun.root;
+    root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Run_"$wrun"_mapped.root -e 'tree->Process("VertexRecon.C+O","Analyzer_17F.root")'; mv Analyzer_17F.root 17F_output/results_run$wrun.root;
     run=run+1
 done
 
diff --git a/run_tr.sh b/run_tr.sh
index 1e954ed..6ebf334 100644
--- a/run_tr.sh
+++ b/run_tr.sh
@@ -80,9 +80,9 @@ fi
 #17F alpha run with gas
 if [[ 1 -eq 1 ]]; then
 export source_vertex=53.44; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_018_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run18.root;
-export source_vertex=14.24; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_019_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run19.root;
-export source_vertex=-24.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_020_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run20.root;
-export source_vertex=-73.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_021_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run21.root;
+# export source_vertex=14.24; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_019_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run19.root;
+# export source_vertex=-24.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_020_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run20.root;
+# export source_vertex=-73.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_021_mapped.root -e 'tree->Process("TrackRecon.C+O")'; mv Analyzer_SX3.root results_run21.root;
 fi
 #17F reaction data
 #export flip180="0"