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ANASEN_analysis/anasen_analysis_vignesh/run_sx3.sh
Sudarsan Balakrishnan b2242ccacd Improved SX3 calibrations, step-ladder correction to pcz. 
A lot of the files are identical to old ones, but the main changes are:
1) EXFit2.C in sx3cal
	- Finds front/right gains for each strip using the known middle two pad edges, but gainmatches all backs
2) Define new 'fix' loci, arising from the step-ladder correction to A1C2 events. This is tested in scratch/sx3z_vs_pcz/testmodel.h, will be given a better name in the future.
3) Explore A1C2 and A1C3 loci in detail
4) environment variables to 'flip' and 'offset' wires during sort. All env vars are set in shell scripts that call them
5) environment variables that allow for timestamp bounds to be set and unset. Default limiting values are 0 and dbl_max so no harm done unless these specific env vars are set.
6) Some bookkeeping indicating 27Al instead of 26Al in all places.
2026-04-14 13:45:11 -04:00

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#Alpha runs at different spacer positions
#rm results_run*.root
#export flipa=1
export anode_offset=1
export DATASET="27Al"
if [[ 1 -eq 0 ]]; then
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_009_mapped.root -e 'tree->Process("MakeVertex.C+O","27Al")'; mv Analyzer_SX3.root results_run09.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_001_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run01.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_002_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run02.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_003_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run03.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_004_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run04.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_005_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run05.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_006_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run06.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_007_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run07.root;
root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_008_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run08.root;
fi
#exit
#alpha+gas 27Al
export DATASET="27Al"
export flip180="0"
#root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_009_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run09.root;
if [[ 1 -eq 0 ]]; then
#export timecut_low=500.0;
#export timecut_high=500.0;
#unset timecut_low, timecut_high
#export source_vertex=53.44; root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_009_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run09.root;
#export source_vertex=53.44; root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_010_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run10.root;
#export source_vertex=53.44; root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_011_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run11.root;
export source_vertex=53.44; root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_012_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run12.root;
#export source_vertex=53.44; root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_013_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run13.root;
#exit
fi
#protons+gas, 27Al
#export flip180="1"
#export flip180="0"
if [[ 1 -eq 1 ]] ; then
export anode_offset=1
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_015_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run15.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_017_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run17.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_018_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run18.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_019_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run19.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_020_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run20.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_021_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run21.root;
root -q -b -x ../ANASEN_analysis/data/27Al_Data/Run_022_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run22.root;
exit
fi
#27Al reaction data
#root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_051_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run51.root;
#root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_078_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run78.root;
#root -b -q -l -x ../ANASEN_analysis/data/27Al_Data/Run_081_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run81.root;
#root -l -x results_run19.root results_run12.root -e "new TBrowser"
#exit
export DATASET="17F"
export flip180="0"
if [[ 1 -eq 0 ]]; then
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_005_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run05.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_006_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run06.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_007_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run07.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_008_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run08.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_009_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run09.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_010_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run10.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_011_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run11.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_012_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run12.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_013_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run13.root;
root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Source_014_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run14.root;
fi
#17F pulser runs
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/PulserRun_015_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run15.root;
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/PulserRun_016_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run16.root;
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/PulserRun_017_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run17.root;
#17F alpha run with gas
export source_vertex=53.44; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_018_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run18.root;
export source_vertex=14.24; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_019_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run19.root;
export source_vertex=-24.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_020_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run20.root;
export source_vertex=-73.96; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/SourceRun_021_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run21.root;
#17F reaction data
export flip180="1"
#export source_vertex=-57.28; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_035_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run35.root;
#export source_vertex=-8.28; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_036_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root resulrs_run36.root;
#export source_vertex=-27.88; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_037_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run37.root;
#export source_vertex=11.32; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_038_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run38.root;
#export source_vertex=30.92; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_039_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run39.root;
#export source_vertex=50.52; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_041_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run41.root;
#export source_vertex=70.12; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_042_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run42.root;
#export source_vertex=109.32; root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_043_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run43.root;
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/ProtonRun_043_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run43.root;
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Run_099_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run99.root;
#root -q -l -b -x ../ANASEN_analysis/data/17F_Data/Run_104_mapped.root -e 'tree->Process("MakeVertex.C+O")'; mv Analyzer_SX3.root results_run104.root;
#mv Analyzer_SX3.root results_run19.root;
unset flipa
unset flipc
unset anode_offset
unset cathode_offset
unset souce_vertex
unset DATASET
unset flip180
unset timecut_low, timecut_high
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