#include <TApplication.h>
#include <TGClient.h>
#include <TSystem.h>
#include <TStyle.h>
#include <TCanvas.h>
#include <TF1.h>
#include <TRandom.h>
#include <TGButton.h>
#include <TRootEmbeddedCanvas.h>
#include <TGMenu.h>
#include <TGLabel.h>
#include <TGNumberEntry.h>
#include <TGraph.h>
#include <TAxis.h>
#include <TGFileDialog.h>
#include <TF1.h>
#include <unistd.h>
#include <ctime>

#include "FSUDAQ.h"

long get_time(){
  long time_ms;
  struct timeval t1;
  struct timezone tz;
  gettimeofday(&t1, &tz);
  time_ms = (t1.tv_sec) * 1000 + t1.tv_usec / 1000;
  return time_ms;
}

Double_t traceFunc(Double_t *x, Double_t *par){
  ///par[0] = baseline
  ///par[1] = start time 
  ///par[2] = rise time
  ///par[3] = Amp
  ///par[4] = decay time
  Double_t result = par[0];
  if(x[0] > par[1]){
    Double_t y = x[0]-par[1];
    result += par[3] *(1 - TMath::Exp( - y / par[2])) * TMath::Exp(-y / par[4]);
  }
  return result;
}

///============= Global variable
TH1F * hEnergy[MaxNBoards][MaxNChannels] = {NULL};
TH1F * hChannel[MaxNBoards] = {NULL};

TGraph * gDummy = NULL; /// this is a dummy TGraph to set the plot range
TGraph * gAnaTrace1  = NULL ; 
TGraph * gAnaTrace2  = NULL ; 
TGraph * gDigiTrace1 = NULL ;
TGraph * gDigiTrace2 = NULL ;  

Pixel_t red, blue, green;

unsigned short nDigi;
Digitizer ** digi = NULL;

unsigned short lastRunID;

///============ static members 
TGTextEdit * MainWindow::teLog = NULL;
TRootEmbeddedCanvas * MainWindow::fEcanvas = NULL;
TGNumberEntry * MainWindow::boardIDEntry = NULL;
TGNumberEntry * MainWindow::chIDEntry = NULL;
TGComboBox* MainWindow::cbMode = NULL;
TGTextEntry * MainWindow::dataPrefix = NULL;
TGNumberEntry * MainWindow::runIDEntry = NULL;
TGCheckButton * MainWindow::cbDataRun = NULL;

BoardSetting * MainWindow::boardSetting = NULL;

enum MenuIdentifiers{
  
  M_DIGITIZER_OPEN,
  M_FILE_OPEN,
  M_EXIT,
  M_LOAD_SETTINGS,
  M_TRIGGER_SUMMARY,
  M_CH_SETTING_PHA,
  M_CH_SETTING_PSD,
  M_REGISTER_SETTING,
  M_BOARD_SETTINGS,
  M_PROGRAM_SETTINGS,
  M_FINDPEAKS
};

enum ModeIdentifiers{
  
  Mode_EnergyHist,
  Mode_CountHist,
  Mode_Oscilloscope,

};

MainWindow::MainWindow(const TGWindow *p,UInt_t w,UInt_t h) {
  
  printf("----- %s \n", __func__);
  
  nDigi = 0;
  
  gClient->GetColorByName("red", red);  
  gClient->GetColorByName("blue", blue);  
  gClient->GetColorByName("green", green);  
  
  /// Create a main frame
  fMain = new TGMainFrame(p,w,h);
  ///fMain->SetWMPosition(500, 500); //does not work
  fMain->Connect("CloseWindow()", "MainWindow", this, "GoodBye()");
  
  {///======================= menu
    fMenuBar = new TGMenuBar(fMain, 1, 1, kHorizontalFrame); fMain->AddFrame(fMenuBar, new TGLayoutHints(kLHintsTop | kLHintsExpandX));
    
    fMenuFile = new TGPopupMenu(gClient->GetRoot());
    fMenuFile->AddEntry("&Open File", M_FILE_OPEN);
    fMenuFile->AddSeparator();
    fMenuFile->AddEntry("E&xit", M_EXIT);
    fMenuFile->Connect("Activated(Int_t)", "MainWindow", this, "HandleMenu(Int_t)");
    fMenuBar->AddPopup("&File",     fMenuFile,     new TGLayoutHints(kLHintsTop | kLHintsLeft, 0, 4, 0, 0));
    
    fMenuDigitizers = new TGPopupMenu(gClient->GetRoot());
    fMenuDigitizers->AddEntry("&Open Digitizers", M_DIGITIZER_OPEN);
    fMenuDigitizers->AddEntry("&Load Setting (Offline)", M_LOAD_SETTINGS);
    fMenuDigitizers->AddEntry("&Trigger Summary", M_TRIGGER_SUMMARY);
    fMenuDigitizers->AddSeparator();
    fMenuDigitizers->AddEntry("Digitizer &Settings", M_BOARD_SETTINGS);
    fMenuDigitizers->AddEntry("&Channel Settings (PHA)", M_CH_SETTING_PHA);
    fMenuDigitizers->AddEntry("&Channel Settings (PSD)", M_CH_SETTING_PSD);
    fMenuDigitizers->AddEntry("&Register Setting", M_REGISTER_SETTING);
    fMenuDigitizers->AddSeparator();
    fMenuDigitizers->AddEntry("&Program Settings", M_PROGRAM_SETTINGS);
    fMenuDigitizers->Connect("Activated(Int_t)", "MainWindow", this, "HandleMenu(Int_t)");
    fMenuBar->AddPopup("&Digitizers", fMenuDigitizers, new TGLayoutHints(kLHintsTop | kLHintsLeft, 0, 4, 0, 0));    
    
    fMenuDigitizers->DisableEntry( M_TRIGGER_SUMMARY);
    fMenuDigitizers->DisableEntry( M_BOARD_SETTINGS);
    fMenuDigitizers->DisableEntry( M_CH_SETTING_PHA);
    fMenuDigitizers->DisableEntry( M_CH_SETTING_PSD);    
    fMenuDigitizers->DisableEntry( M_REGISTER_SETTING);

    fMenuUtility = new TGPopupMenu(gClient->GetRoot());
    //fMenuDigitizers->AddSeparator();
    fMenuUtility->AddEntry("Find &Peaks", M_FINDPEAKS);
    fMenuUtility->Connect("Activated(Int_t)", "MainWindow", this, "HandleMenu(Int_t)");
    fMenuBar->AddPopup("&Utility", fMenuUtility, new TGLayoutHints(kLHintsTop | kLHintsLeft, 0, 4, 0, 0));    
    
  }

  TGLayoutHints * uniLayoutHints = new TGLayoutHints(kLHintsNormal, 2,2,10,0); ///left, right, top, bottom
  TGLayoutHints * hahaLayoutHints = new TGLayoutHints(kLHintsNormal, 2,2,15,0); ///left, right, top, bottom
  TGLayoutHints * haha = new TGLayoutHints(kLHintsLeft | kLHintsCenterY, 2, 2, 10, 0); ///left, right, top, bottom
    
  
  TGHorizontalFrame *hframe = new TGHorizontalFrame(fMain); fMain->AddFrame(hframe, new TGLayoutHints(kLHintsCenterX,2,2,2,2));
  
  {///================= Create a horizontal frame widget with buttons
    TGGroupFrame * group0 = new TGGroupFrame(hframe, "Run Control", kVerticalFrame); hframe->AddFrame(group0);
    
    TGVerticalFrame * vframe = new TGVerticalFrame(group0); group0->AddFrame(vframe); 
    TGHorizontalFrame *hfg0 = new TGHorizontalFrame(vframe); vframe->AddFrame(hfg0 ,new TGLayoutHints(kLHintsLeft, 0, 0, 0, 0));
    
    bOpenDigitizers = new TGTextButton(hfg0,"Open Digitizers"); hfg0->AddFrame(bOpenDigitizers, uniLayoutHints);
    bOpenDigitizers->Connect("Clicked()","MainWindow",this,"OpenDigitizers()");
    
    bStartRun = new TGTextButton(hfg0,"Start Run");  hfg0->AddFrame(bStartRun, uniLayoutHints);
    bStartRun->Connect("Clicked()", "MainWindow", this, "StartRun()");
    bStartRun->SetEnabled(false);

    bStopRun = new TGTextButton(hfg0,"Stop Run");  hfg0->AddFrame(bStopRun, uniLayoutHints);
    bStopRun->Connect("Clicked()", "MainWindow", this, "StopRun()");
    bStopRun->SetEnabled(false);
    
    TGLabel * lbMode = new TGLabel(hfg0, "Mode"); hfg0->AddFrame(lbMode, hahaLayoutHints);
    cbMode = new TGComboBox(hfg0); hfg0->AddFrame(cbMode, uniLayoutHints);
    cbMode->AddEntry("Energy Hist.", Mode_EnergyHist);
    cbMode->AddEntry("Count Hist.", Mode_CountHist);
    cbMode->AddEntry("Ocsilloscope.", Mode_Oscilloscope);
    cbMode->Select(Mode_Oscilloscope, false);
    cbMode->Resize(80, 20);
    cbMode->Connect("Changed()", "MainWindow", this, "ChangePlot()");
    
    TGHorizontalFrame *hfg1 = new TGHorizontalFrame(vframe); vframe->AddFrame(hfg1 ,new TGLayoutHints(kLHintsLeft, 0, 0, 0, 0));
    
    TGLabel * lbDataPath = new TGLabel(hfg1, "Save Data Prefix"); hfg1->AddFrame(lbDataPath, hahaLayoutHints);
    dataPrefix = new TGTextEntry(hfg1, ProgramSetting::ExpName.c_str()); hfg1->AddFrame(dataPrefix,uniLayoutHints);
    dataPrefix->SetEnabled(false);
    dataPrefix->Resize(100, 20);
    
    TGLabel * lbRunNum = new TGLabel(hfg1, "Run"); hfg1->AddFrame(lbRunNum, hahaLayoutHints);   
    runIDEntry = new TGNumberEntry(hfg1, 0, 0, 0, TGNumberFormat::kNESInteger, TGNumberFormat::kNEANonNegative); hfg1->AddFrame(runIDEntry, uniLayoutHints);
    runIDEntry->SetNumber(lastRunID, false);
    runIDEntry->SetWidth(50);
    
    cbDataRun = new TGCheckButton(hfg1, "Data Run", 1); hfg1->AddFrame(cbDataRun, hahaLayoutHints);
    cbDataRun->SetState(kButtonUp);
    
    TGHorizontalFrame *hfg2 = new TGHorizontalFrame(vframe); vframe->AddFrame(hfg2 ,new TGLayoutHints(kLHintsLeft, 0, 0, 0, 0));
    
  }
  
  {///================= single Channel group
    TGGroupFrame * group1 = new TGGroupFrame(hframe, "Single Channel", kHorizontalFrame); hframe->AddFrame(group1, new TGLayoutHints(kLHintsExpandY));
    TGHorizontalFrame *hfg1 = new TGHorizontalFrame(group1,200,30); group1->AddFrame(hfg1 ,new TGLayoutHints(kLHintsLeft, 0, 0, 0, 0));
    
    
    TGLabel * lb0 = new TGLabel(hfg1, "Board"); hfg1->AddFrame(lb0, haha);  
    boardIDEntry = new TGNumberEntry(hfg1, 0, 0, 0, TGNumberFormat::kNESInteger, TGNumberFormat::kNEANonNegative); hfg1->AddFrame(boardIDEntry, haha);
    boardIDEntry->SetWidth(50);
    boardIDEntry->SetState(false);
    boardIDEntry->Connect("Modified()", "MainWindow", this, "ChangeBoard()"); 
    
    TGLabel * lb1 = new TGLabel(hfg1, "Channel"); hfg1->AddFrame(lb1, haha);
    chIDEntry = new TGNumberEntry(hfg1, 0, 0, 0, TGNumberFormat::kNESInteger, TGNumberFormat::kNEAAnyNumber); hfg1->AddFrame(chIDEntry, haha);
    chIDEntry->SetWidth(50);
    chIDEntry->SetState(false);
    chIDEntry->Connect("Modified()", "MainWindow", this, "ChangePlot()");
    
    bPlotSingleTrace = new TGTextButton(hfg1,"Plot Trace");  hfg1->AddFrame(bPlotSingleTrace, haha);
    bPlotSingleTrace->Connect("Clicked()", "MainWindow", this, "PlotSingleTrace()");
    bPlotSingleTrace->SetEnabled(false);
    
    bFitTrace = new TGTextButton(hfg1,"Fit Trace");  hfg1->AddFrame(bFitTrace, haha);
    bFitTrace->Connect("Clicked()", "MainWindow", this, "FitTrace()");
    bFitTrace->SetEnabled(false);
  }     
  
  {///================= canvas widget
    fEcanvas = new TRootEmbeddedCanvas("Ecanvas",fMain,900,400);
    fMain->AddFrame(fEcanvas, new TGLayoutHints(kLHintsExpandX | kLHintsExpandY, 10,10,10,10));
  }
  
  {///================= Log massage
    TGGroupFrame * groupLog = new TGGroupFrame(fMain, "Log Message", kHorizontalFrame);
    fMain->AddFrame(groupLog, new TGLayoutHints(kLHintsExpandX, 10,10,10,10) );
    
    teLog = new TGTextEdit(groupLog, w, 100);  groupLog->AddFrame(teLog, new TGLayoutHints(kLHintsExpandX, 2,2,10,0) );
  }

  /// Set a name to the main frame
  fMain->SetWindowName("FSU DAQ");
  /// Map all subwindows of main frame
  fMain->MapSubwindows();
  /// Initialize the layout algorithm
  fMain->SetWMPosition(200, 200); //does not work??
  fMain->Resize(fMain->GetDefaultSize());
  
  /// Map main frame
  fMain->MapWindow();
  
  /// setup thread
  runThread = new TThread("kakaka", Run, (void *) 1);
  
  boardSetting = NULL;
  channelSettingPHA = NULL;
  channelSettingPSD = NULL;
  registerSetting = NULL;
  triggerSummary = NULL;
  programSetting = NULL;
  
  LogMsg((char*)"The LogMsg is not complete for all actions. [update later]");
  LogMsg((char*)"Please \"Program Setting\" to set data folder");
  LogMsg((char*)"Please \"Open Digitizers\" to start.");
  LogMsg((char*)"OR. \"Load Setting (Offline)\" for inspecting setting file.");
  
  //HandleMenu(M_DIGITIZER_OPEN);
  //HandleMenu(M_BOARD_SETTINGS);
  //HandleMenu(M_CH_SETTING_PHA);
  //HandleMenu(M_CH_SETTING_PSD);
  //HandleMenu(M_REGISTER_SETTING);
  //HandleMenu(M_TRIGGER_SUMMARY);
  //HandleMenu(M_PROGRAM_SETTINGS);
  
  gDummy = new TGraph();
  gDummy->SetPoint(0, 0, 0); /// the lower left corner
  gDummy->GetXaxis()->SetTitle("[ns]");
  
  gAnaTrace1 = new TGraph();  
  gAnaTrace1->SetName("Analog Trace 1");
  gAnaTrace1->GetXaxis()->SetTitle("[ns]");
  gAnaTrace2 = new TGraph();
  gAnaTrace2->SetName("Analog Trace 2");
  gAnaTrace2->SetLineColor(2);
  gDigiTrace1 = new TGraph(); 
  gDigiTrace1->SetName("Digital Trace 1");
  gDigiTrace1->SetLineColor(4);
  gDigiTrace2 = new TGraph(); 
  gDigiTrace2->SetName("Digital Trace 2");
  gDigiTrace2->SetLineColor(6);
  
  gStyle->SetOptStat("neiou");


  DrawDummyGraph();

}

void MainWindow::GoodBye(){
  
  for( int i = 0; i < nDigi; i++) digi[i]->CloseDigitizer();
  
  for( int i = 0; i < nDigi; i++) delete digi[i];

  for( int i = 0; i < MaxNBoards; i++){
    delete hChannel[i];
    for( int j = 0; j < MaxNChannels; j++){
      delete hEnergy[i][j];
    }
  }

  delete gDummy;
  delete gAnaTrace1 ; 
  delete gAnaTrace2 ; 
  delete gDigiTrace1;
  delete gDigiTrace2;  
  
  printf("----- bye bye ---- \n");
  gApplication->Terminate(0);
  
}

MainWindow::~MainWindow() {
  /// The destrcutor is overrided by GoodBye();
  
  printf("----- %s \n", __func__);

  delete fMenuBar;
  delete fMenuFile;
  delete fMenuDigitizers;
  delete fMenuUtility;
  delete fEcanvas;
  
  delete boardIDEntry;
  delete chIDEntry;
  
  delete teLog;
  
  delete bOpenDigitizers;
  delete bStartRun;
  delete bStopRun;
  delete cbMode;
  
  delete dataPrefix;
  delete runIDEntry;
  delete cbDataRun;

  delete bPlotSingleTrace;
  delete bFitTrace;
  
  delete boardSetting;
  delete channelSettingPHA;
  delete channelSettingPSD;
  delete registerSetting;
  delete triggerSummary;
  delete programSetting;
  delete runThread;
  
  fMain->Cleanup();
  delete fMain;
}
void MainWindow::HandleMenu(Int_t id){
  switch(id){
    
    ///========================= Scan digitizers
    case M_DIGITIZER_OPEN:{
      OpenDigitizers();      
    }break;
    
    ///========================= File Open
    case M_FILE_OPEN:{
      LogMsg((char *) "Not implemented.");
      
    }break;
    
    ///========================= Exit
    case M_EXIT: GoodBye(); break;
    
    ///========================= Trigger summary
    case M_TRIGGER_SUMMARY: {
      triggerSummary = new TriggerSummary(gClient->GetRoot(), 600, 600);
    }break;

    case M_LOAD_SETTINGS:{
      LoadSettingFromFile();
    }break;

    ///========================= Channel setting    
    case M_CH_SETTING_PHA:
      channelSettingPHA = new ChannelSettingPHA(gClient->GetRoot(), 600, 600, 0);
      channelSettingPHA->Connect("LogMsg(char*)", "MainWindow", this, "LogMsg(char*)");
      channelSettingPHA->Connect("SendPlotTraceCmd()", "MainWindow", this, "PlotSingleTrace()");
      break;
    
    case M_CH_SETTING_PSD:
      channelSettingPSD = new ChannelSettingPSD(gClient->GetRoot(), 600, 600, 0);
      channelSettingPSD->Connect("LogMsg(char*)", "MainWindow", this, "LogMsg(char*)");
      //channelSettingPSD->Connect("SendPlotTraceCmd()", "MainWindow", this, "PlotSingleTrace()");
      break;
    
    ///========================= Board setting
    case M_BOARD_SETTINGS:{
      boardSetting = new BoardSetting(gClient->GetRoot(), 600, 600);
      boardSetting->Connect("LogMsg(char*)", "MainWindow", this, "LogMsg(char*)");
      boardSetting->Connect("Haha(Int_t)", "MainWindow", this, "OpenChannelSetting(Int_t)");
    }break;
    
    ///========================= Setting Summary
    case M_REGISTER_SETTING:{
      registerSetting = new RegisterSetting(gClient->GetRoot(), 600, 600, Register::DPP::RecordLength_G);
      ///registerSetting->Connect("SendChangeSignal()", "ChannelSettingPHA", this, "ChangeCh()");
      ///registerSetting->Connect("SendChangeSignal()", "ChannelSettingPSD", this, "ChangeCh()");
    }break;  
    
    ///========================= Program setting
    case M_PROGRAM_SETTINGS:{
      programSetting = new ProgramSetting(gClient->GetRoot());
      programSetting->Connect("SetSetting()", "MainWindow", this, "UpdateExpName()");
      ///LogMsg((char*) Form("database : %s, name : %s ", ProgramSetting::databaseIP.c_str(), ProgramSetting::databaseName.c_str() ));
      
    }break;
    
    ///====================== Fit Gaussian
    case M_FINDPEAKS:{
      
      LogMsg((char*)"[Find Gaussian Peaks] Not impelmented");
      
    }break;
    
  }
  
}

void MainWindow::OpenDigitizers(){

  /// if dig exist, say, from loading setting file without digitizer
  for( int i = 0 ; i < nDigi; i++ ) delete digi[i];
  nDigi = 0;

  LogMsg((char*)"============= detect digitizers");
  std::vector<int> DPPType;
  DPPType.clear();
  portID.clear();
  boardID.clear();
  nDigi = 0;
  
  Digitizer * dig = new Digitizer();
  LogMsg((char*)"Finding Digitizer for 4 ports and 3 boards for each port...");
  for( int port = 0; port < 4 ; port ++){
    for( int board = 0; board < 3 ; board ++){
      dig->OpenDigitizer(board, port);
      if ( dig->GetConnectionStatus() ) {
        nDigi++;
        DPPType.push_back(dig->GetDPPType());
        portID.push_back(port);
        boardID.push_back(board);
        serialNum.push_back(dig->GetSerialNumber());
        dig->CloseDigitizer();
      }
    }
  }
  delete dig;
  
  LogMsg(Form("========== found %d digitizer(s)", nDigi));
  for( int i = 0 ; i < nDigi ; i++){
    LogMsg(Form("port: %d, board: %d, DPP Type : %d", portID[i], boardID[i], DPPType[i]));
  }
  
  if( nDigi > 0 ) {
    LogMsg(Form("============= Connect %d digitizer(s)...", nDigi));
    
    digi = new Digitizer * [nDigi];
    
    for( int i = 0; i < nDigi; i++){
      printf("------------ %d \n", i);
      digi[i] = new Digitizer(boardID[i], portID[i], false, false); 
      LogMsg(Form("%2d, Serial number : %3d opened (%s, %s)", i, digi[i]->GetSerialNumber(), 
                                                                 digi[i]->GetDPPString().c_str(),
                                                                 digi[i]->GetModelName().c_str()));

      digi[i]->OpenSettingBinary(ProgramSetting::DataSavingPath + "/settings/setting_" + std::to_string(digi[i]->GetSerialNumber()) + ".bin");
    }
    
    fMenuDigitizers->DisableEntry( M_DIGITIZER_OPEN);
    fMenuDigitizers->DisableEntry( M_LOAD_SETTINGS);
    fMenuDigitizers->EnableEntry(  M_BOARD_SETTINGS);
    fMenuDigitizers->EnableEntry(  M_CH_SETTING_PHA);
    fMenuDigitizers->EnableEntry(  M_CH_SETTING_PSD);
    fMenuDigitizers->EnableEntry(  M_TRIGGER_SUMMARY);
    fMenuDigitizers->EnableEntry(  M_REGISTER_SETTING);
    bOpenDigitizers->SetEnabled(false);
    
    bStartRun->SetEnabled(true);
    
    if( nDigi > 1) boardIDEntry->SetState(true);
    chIDEntry->SetState(true);
    boardIDEntry->SetLimits(TGNumberFormat::kNELLimitMinMax, 0, nDigi-1);
    
    boardIDEntry->SetNumber(0, false);
    chIDEntry->SetLimits(TGNumberFormat::kNELLimitMinMax, 0, digi[0]->GetNChannel() -1 );

    bPlotSingleTrace->SetEnabled(true);
    bFitTrace->SetEnabled(true);
    
    for( int i = 0; i < nDigi; i++){
      hChannel[i] = new TH1F(Form("hBd%02d", i),Form("hBd%02d; ch; count", i), digi[i]->GetNChannel(), 0, digi[i]->GetNChannel());
      for( int j = 0; j < MaxNChannels; j++) hEnergy[i][j] = new TH1F(Form("hE%02dch%02d", i, j),Form("hE bd-%02d ch-%02d; Energy[ch]; count", i, j), 400, 0, 30000);
    }
    
  }

}

void MainWindow::LoadSettingFromFile(){
  
  const char *filetypes[] = { "Setting File", "*.bin",
                              "ROOT files",    "*.root",
                              "ROOT macros",   "*.C",
                              "Text files",    "*.[tT][xX][tT]",
                              0,               0 };
  
  TGFileInfo fi;
  fi.fFileTypes = filetypes;
  fi.SetIniDir(".");
  printf("fIniDir = %s\n", fi.fIniDir);
  new TGFileDialog(gClient->GetRoot(), fMain, kFDOpen, &fi);
  printf("Open file: %s (dir: %s)\n", fi.fFilename, fi.fIniDir);
  
  if( fi.fFilename == NULL) return;
  
  int loadStatus = -1;
  /// if no digitize open
  if( digi == NULL ) {
    LogMsg((char *)"No Digitizer is connected. Create a dummy digitizer.");
    digi = new  Digitizer *[1];
    nDigi = 1;
    digi[0] = new Digitizer();
    loadStatus = digi[0]->LoadSettingBinary( fi.fFilename );
    boardIDEntry->SetNumber(0, false);
  }else{
    loadStatus = digi[0]->LoadSettingBinary( fi.fFilename ); /// still dummy digitizer
  }

  HandleMenu(M_BOARD_SETTINGS);
  OpenChannelSetting(0);
  
}

void MainWindow::ChangeBoard(){
  int boardID = boardIDEntry->GetNumber();
  chIDEntry->SetLimits(TGNumberFormat::kNELLimitMinMax, 0, digi[boardID]->GetNChannel() -1 );
  ChangePlot();
}

void MainWindow::UpdateExpName(){
  dataPrefix->SetText(ProgramSetting::ExpName.c_str());
  runIDEntry->SetNumber(lastRunID);
}

void MainWindow::MakeElogEntry(bool start){
  
  if(  ProgramSetting::EnableElog == false ) return;
  
  TString cmd = Form("%s/DAQ/elogEntry.sh %d", ProgramSetting::programPath.c_str(), start);
  int temp = system(cmd.Data());

}

void MainWindow::StartRun(){
  LogMsg(Form("%s",__func__));
  if( digi == NULL) return;
  
  for( int bd = 0; bd < nDigi; bd++){
    hChannel[bd]->Reset();
    for( int ch = 0; ch < MaxNChannels; ch++){
      hEnergy[bd][ch]->Reset();
    }
  }
 
  bStartRun->SetEnabled(false);
  bStopRun->SetEnabled(true);
  dataPrefix->SetEnabled(false);
  runIDEntry->SetState(false);
  bPlotSingleTrace->SetEnabled(false);
  bFitTrace->SetEnabled(false);
  
  if( cbDataRun->GetState() == kButtonDown ) {
    cbMode->SetEnabled(false);
    MakeElogEntry(true);
  }
  
  HandleMenu(M_TRIGGER_SUMMARY); 
  
  bool threadFlag = false;
  for( int i = 0 ; i < nDigi; i++) {
    digi[i]->StartACQ();
    if( digi[i]->IsRunning() ) threadFlag = true;
  }
  
  if( threadFlag ) runThread->Run();
  
  if( boardSetting != NULL ) boardSetting->ReadStatus();

}

void MainWindow::StopRun(){
  LogMsg(Form("%s",__func__));
  if( digi == NULL) return;
  
  for( int i = 0; i < nDigi; i++) digi[i]->StopACQ();

  runThread->Join();
  
  ///===== clear data;
  for( int i = 0; i < nDigi; i++) digi[i]->GetData()->ClearTriggerRate();
  
  bStartRun->SetEnabled(true);
  bStopRun->SetEnabled(false); 
  dataPrefix->SetEnabled(true);
  runIDEntry->SetState(true);
  bPlotSingleTrace->SetEnabled(true);
  bFitTrace->SetEnabled(true);
  cbMode->SetEnabled(true);

  if( triggerSummary != NULL ) triggerSummary->CloseWindow();
  
  ///if( cbMode->GetSelected() == Mode_DataRun ){
  if( cbDataRun->GetState() == kButtonDown ) {
    int runID = runIDEntry->GetNumber();
    lastRunID = runID + 1;
    runIDEntry->SetNumber(runID +1);
    MakeElogEntry(false);
    ProgramSetting::SaveProgramSetting();
  } 
  
}

void MainWindow::OpenChannelSetting(Int_t boardID){
  if( digi == NULL ) return;
  
  if( digi[boardID]->GetDPPType() == V1730_DPP_PHA_CODE ){
    channelSettingPHA = new ChannelSettingPHA(gClient->GetRoot(), 600, 600, boardID);
    channelSettingPHA->Connect("LogMsg(char*)", "MainWindow", this, "LogMsg(char*)");
    channelSettingPHA->Connect("SendPlotTraceCmd()", "MainWindow", this, "PlotSingleTrace()");
  }
  
  if( digi[boardID]->GetDPPType() == V1730_DPP_PSD_CODE ){
    channelSettingPSD = new ChannelSettingPSD(gClient->GetRoot(), 600, 600, boardID);
    channelSettingPSD->Connect("LogMsg(char*)", "MainWindow", this, "LogMsg(char*)");
    //channelSettingPSD->Connect("SendPlotTraceCmd()", "MainWindow", this, "PlotSingleTrace()");
  }
}

//TODO, should merge into LogMsg.
void MainWindow::UpdateChannelSetting(){
  if( digi == NULL ) return;
  
  if( channelSettingPHA != NULL ) channelSettingPHA->ChangeCh();
  if( channelSettingPSD != NULL ) channelSettingPSD->ChangeCh();  
}

void MainWindow::LogMsg(char * msg){
  
  time_t now = time(0);
  tm * ltm = localtime(&now);
  int year = 1900 + ltm->tm_year;
  int month = 1 + ltm->tm_mon;
  int day = ltm->tm_mday;
  int hour = ltm->tm_hour;
  int minute = ltm->tm_min;
  int secound = ltm->tm_sec;
  
  TString outMsg = Form("[%4d-%02d-%02d %02d:%02d:%02d] %s", year, month, day, hour, minute, secound, msg);
  
  teLog->AddLine(outMsg);
  printf("%s\n", outMsg.Data());
  teLog->ShowBottom();
  
}

void MainWindow::DrawDummyGraph(){

  int boardID = boardIDEntry->GetNumber();
  int chID = chIDEntry->GetNumber();
  
  int ch2ns = 4.0;
  uint32_t rl = 125;
  
  fEcanvas->GetCanvas()->cd();
  
  if( digi != NULL ) {
    ch2ns = (int) digi[boardID]->GetCh2ns();
    rl = digi[boardID]->GetSettingFromMemory(Register::DPP::RecordLength_G, chID);
  }
  
  gDummy->SetPoint(1, 8.*rl*ch2ns, 0);
  gDummy->SetLineColor(15);
  gDummy->Draw("AL");
  gDummy->GetXaxis()->SetRangeUser(0, 8*rl*ch2ns);
  gDummy->GetYaxis()->SetRangeUser(-1000, 0x3FFF);
}

void MainWindow::PlotSingleTrace(){
  printf("=== %s\n", __func__); 
  
  if( digi == NULL ) return;

  int boardID = boardIDEntry->GetNumber();
  int chID = chIDEntry->GetNumber();

  uint32_t bdConfig = digi[boardID]->GetSettingFromMemory(Register::DPP::BoardConfiguration);
  bool isDualTrace = ( bdConfig >> 11 ) & 0x1;
  bool isRecordWave = ( bdConfig >> 16 ) & 0x1;
  
  if( !isRecordWave ) {
    LogMsg((char *) "Please enable trace recording.");
    return;
  }
    
  Data * data = digi[boardID]->GetData();
  int ch2ns = (int) digi[boardID]->GetCh2ns();

  DrawDummyGraph();

  digi[boardID]->StartACQ();
  
  int count = 0;
  while(count < 10){
    usleep(100*1000); /// wait half sec
    digi[boardID]->ReadData();
    
    if( data->nByte > 0 ){
      data->DecodeBuffer(false, 2);
      data->PrintStat();

      int traceLength = (data->Waveform1[chID][0]).size();
      
      if( traceLength == 0 ) {
        LogMsg((char *)"no trace");
        bFitTrace->SetEnabled(false);
      }else{
        
        for( int i = 0; i < traceLength ; i++) {
          gAnaTrace1->SetPoint(i, i*ch2ns*(1+isDualTrace), (data->Waveform1[chID][0])[i]);

        }
        
        double xmin, xmax, ymin, ymax;
        gAnaTrace1->ComputeRange(xmin, ymin, xmax, ymax);
        for( int i = 0; i < traceLength ; i++) {
          gDigiTrace1->SetPoint(i, i*ch2ns*(1+isDualTrace), (ymax-ymin)*(data->DigiWaveform1[chID][0])[i] + ymin);
          if( isDualTrace) {
             short haha =  (data->Waveform2[chID][0])[i];
             if( haha > 0x1FFF ) haha -= 0x3FFF;
             gAnaTrace2->SetPoint(i, i*ch2ns*(1+isDualTrace), haha);
          }
        }
      }
      data->ClearData();
      
      fEcanvas->GetCanvas()->cd();
      
      gAnaTrace1->Draw("same L");
      gAnaTrace2->Draw("same L");
      gDigiTrace1->Draw("same L");
      fEcanvas->GetCanvas()->Update();      
      break;
      
      bFitTrace->SetEnabled(true);
    
    }
    
    count++;
    
  };
  digi[0]->StopACQ();
  if( count == 10 ) LogMsg((char*)"Plot Trace TimeOut, please check setting");

}

void MainWindow::FitTrace(){
  printf("=== %s not impletement.\n", __func__); 

  if( gAnaTrace1->GetN() == 0 ) return;
  
  double xmin, xmax, ymin, ymax;
  gAnaTrace1->ComputeRange(xmin, ymin, xmax, ymax);
  
  TF1 * f1 = new TF1("f1", traceFunc, xmin, xmax, 5);
  f1->SetLineWidth(3);
  f1->SetLineColor(1);
  f1->SetNpx(1000);
  f1->SetParameter(0, ymin);
  f1->SetParameter(1, 1000); //TODO get from digi[Board]->PreTrigger * 4 * ch2ns
  f1->SetParameter(2, 20);
  f1->SetParameter(3, ymax-ymin);
  f1->SetParameter(4, 50000);
  
  gAnaTrace1->Fit("f1", "R");
  fEcanvas->GetCanvas()->Update();
  gSystem->ProcessEvents();   

  const Double_t* paraE = f1->GetParErrors();
  const Double_t* paraA = f1->GetParameters();
  
  LogMsg((char*)"---------- Fit result");
  
}

void MainWindow::ChangePlot(){
  int boardID = boardIDEntry->GetNumber();
  int ch = chIDEntry->GetNumber();
  
  fEcanvas->GetCanvas()->cd();
  if( cbMode->GetSelected() == Mode_CountHist ) hChannel[boardID]->Draw("hist");

  if( cbMode->GetSelected() == Mode_EnergyHist ) hEnergy[boardID][ch]->Draw("hist");
  
  if( cbMode->GetSelected() == Mode_Oscilloscope ){
    
    DrawDummyGraph();
    
    uint32_t bdConfig = digi[boardID]->GetSettingFromMemory(Register::DPP::BoardConfiguration);
    bool isDualTrace = ( bdConfig >> 11 ) & 0x1;
    gAnaTrace1->GetYaxis()->SetRangeUser(0, 0x3FFF);
    gAnaTrace1->Draw("L");
    if( isDualTrace ) gAnaTrace2->Draw("L");
    gDigiTrace1->Draw("L");
  }

  fEcanvas->GetCanvas()->Update();      
  
}

//TODO use the ptr to tell which board, and each digitizer has an indivual thread for savign data and filling hists.
void * MainWindow::Run(void * ptr){
  printf("=== %s\n", __func__); 
  
  if( digi == NULL ) return 0;
  
  int boardID = boardIDEntry->GetNumber();
  int ch = 0;
  int ch2ns = 4;
  int traceLength = 0;
  
  uint32_t PreviousTime = get_time();
  uint32_t CurrentTime = 0;
  uint32_t ElapsedTime = 0;
  
  TString dataFileName = ProgramSetting::DataSavingPath + "/data/" + dataPrefix->GetText();
  dataFileName += Form("_run%03d", (int) runIDEntry->GetNumber());
  
  printf("|%s|\n", dataFileName.Data());
  
  if( cbDataRun->GetState() == kButtonDown) {
    TString msg = Form("Save data to : %s_***.bin\n", dataFileName.Data());
    teLog->AddLine(msg.Data());
    teLog->ShowBottom();
  }
  
  uint32_t bdConfig = digi[boardID]->GetSettingFromMemory(Register::DPP::BoardConfiguration);
  bool isDualTrace = ( bdConfig >> 11 ) & 0x1;
  bool hasTrace = (bdConfig >> 16 ) & 0x1;
          
  Data * data = digi[boardID]->GetData();
  
  DrawDummyGraph();
    
  while(digi[boardID]->IsRunning()){
    
    usleep(100*1000); /// wait 100 msec
    digi[boardID]->ReadData();
    if( boardSetting != NULL ) boardSetting->ReadStatus();
    
    ch2ns = (int) digi[boardID]->GetCh2ns();
    ch = chIDEntry->GetNumber();
    
    if( data->nByte > 0 ){
      //data->PrintStat();
      
      if( cbDataRun->GetState() == kButtonDown ) {
        // Rate graph?
        data->SaveBuffer(dataFileName.Data());
        data->DecodeBuffer(true, 0);
        
        CurrentTime = get_time();
        if( CurrentTime - PreviousTime > 1000 ){          
          std::string msg = Form("File Size : %.2f MB", data->GetPresentFileSize() / 1024./1024. );
          teLog->AddLine(msg.c_str());
          teLog->ShowBottom();
          PreviousTime = CurrentTime;
        }
        
      }else{
        data->DecodeBuffer(false, 0);
      }
    }
        
    if( cbDataRun->GetState() == kButtonUp ) {
   
      fEcanvas->GetCanvas()->cd();
   
      /// use the last trace
      if( cbMode->GetSelected() == Mode_Oscilloscope && hasTrace){
         
        unsigned short nData = data->NumEvents[ch];
        traceLength = (data->Waveform1[ch][nData-1]).size();
        if( traceLength > 0 ){
          for( int i = 0; i < traceLength; i++) {
            gAnaTrace1->SetPoint(i, i*ch2ns*(1+isDualTrace), (data->Waveform1[ch][nData-1])[i]);
            if( isDualTrace) {
               short haha =  (data->Waveform2[ch][nData-1])[i];
               if( haha > 0x1FFF ) haha -= 0x3FFF;
               gAnaTrace2->SetPoint(i, i*ch2ns*(1+isDualTrace), haha );
            }
          }
          
          /// since the gDummy fixed the draw range, it does not really matter to remove extra points
           
          gAnaTrace1->Draw("same L");
          gAnaTrace2->Draw("same L");
        }
      }

      CurrentTime = get_time();
      ElapsedTime = CurrentTime - PreviousTime; /// milliseconds


      if( ElapsedTime > 200 ){        
          
        ///Fill Channel Count
        for( int i = 0 ; i < digi[boardID]->GetNChannel(); i++){
          for( int j = 0; j < data->NumEvents[i]; j++) hChannel[boardID]->Fill(i);
        }
      
        ///Fill Energy histogram
        for( int i = 0; i < data->NumEvents[ch]; i++){
          hEnergy[boardID][ch]->Fill( data->Energy[ch][i] );
        }
      
        if( cbMode->GetSelected() == Mode_EnergyHist ) hEnergy[boardID][ch]->Draw("hist");
        if( cbMode->GetSelected() == Mode_CountHist ) hChannel[boardID]->Draw("hist");
      
        data->ClearData();
        PreviousTime = CurrentTime;
      }
        
      fEcanvas->GetCanvas()->Update(); 
    }
        
    data->ClearData();
  }
  
  return ptr;
}

//############################################
int main(int argc, char **argv) {
  printf(" Welcome to FSU DQ \n");
  
  ProgramSetting::LoadProgramSetting();
  
  TApplication theApp("App",&argc,argv);
  new MainWindow(gClient->GetRoot(),800,800);
  theApp.Run(); 
  
  printf("------ see you next time :) ------ \n");
  
  return 0;
}