SOLARIS_Analysis/SetupNewExp

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#!/bin/bash -l
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###################################################
##
## This is a script for Setup/switch Experiment
##
##
##
####################################################
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RED='\033[1;31m'
YELLOW='\033[1;33m'
ORANGE='\033[0;33m'
GREEN='\033[1;32m'
BLUE='\033[0;34m'
Cyan='\033[0;36m'
NC='\033[0m' #no color
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############## need to distingish mac and daq
Arch="$(uname -s)"
PCName="$(hostname)"
PCID=-1 #if PCID == 1 (DAQ), 2 (MAC), -1(OTHER)
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#------ Set up data folder, check disk space
echo -e "${YELLOW} 0) ################## Check computer name and arch. ${NC}"
echo "PC name : ${PCName}"
echo "Archetech: ${Arch}"
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if [ ${Arch} == "Linux" ] && [ ${PCName} == "solaris-daq" ]; then
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PCID=1
pathsSetting=${HOME}/SOLARIS_QT6_DAQ/programSettings.txt
if [ -e ${pathsSetting} ]; then
echo "Found DAQ programSettings.txt for paths settings"
analysisPath=$(cat ${pathsSetting} | head -n 2 | tail -n 1)
if [ "${analysisPath}" = "$(pwd)" ]; then
echo "The analysisPath from ${analysisPath} is same as the present folder $(pwd)"
else
echo "The analysisPath from ${analysisPath} is different from present folder $(pwd). Abort."
exit
fi
rawDataPathParent=$(cat ${pathsSetting} | head -n 3 | tail -n 1)
rootDataPathParent=$(cat ${pathsSetting} | head -n 4 | tail -n 1)
databaseIP=$(cat ${pathsSetting} | head -n 6 | tail -n 1)
databaseName=$(cat ${pathsSetting} | head -n 7 | tail -n 1)
#echo ${rawDataPathParent}
#echo ${rootDataPathParent}
#echo ${databaseIP}
#echo ${databaseName}
else
echo "${RED} Cannot found DAQ programSettings.txt for path settings ${NC}"
echo "Seek Ryan for help"
exit
fi
fi
if [ ${Arch} == "Darwin" ] && [ ${PCName} == "SOLARISs-Mac-Studio.local" ]; then
PCID=2
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rawDataPathParent=${HOME}/experimentalData/
rootDataPathParent=${HOME}/experimentalData/
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fi
############### Check is git exist
isGitExist=0
if [ -d $(pwd)/".git" ]; then
echo -e "Git repository exists."
else
echo -e "Git repository does not exist. Abort."
if [ ${PCID} -eq 1 ]; then
echo -e "Use SOLARIS DAQ to setup new experiment"
fi
exit
fi
if [ ${PCID} -eq 1 ]; then
echo -e "================================================ ${YELLOW}SOLARIS DAQ ${NC}"
elif [ ${PCID} -eq 2 ]; then
echo -e "================================================ ${YELLOW}SOLARIS MAC ${NC}"
else
echo -e "================================================ ${YELLOW}Other PC ${NC}"
fi
echo " The bach script do following things "
echo " 1) git-fetch "
echo " 2) check repository is clean"
echo " 3) check is git branch exist"
echo " branch exist --> git checkout "
echo " branch not exist --> create expName.sh"
echo " 4) making directories for data, root_data"
echo " 5) create symbolic links to data, root_data"
echo " 6) Tell Database SetupNewExp change exp. (only from the DAQ)"
echo " 7) git push (if new exp.)"
echo "============================================================="
expName=$1
############### this will define global enviroment varibales, like the analysis path, export armory
#source SOLARIS.sh
############### Check git
echo -e "${YELLOW} 1) ################## Git Fetch ${NC}"
echo "when password is needed, please edit .git/config"
git fetch
echo -e "${YELLOW} 2) ################## Checking git repository is clean or not.... ${NC}"
gitCheck=`git status --porcelain --untracked-files=no | wc -l`
if [ ${gitCheck} -eq 0 ]; then
echo "---- clean."
else
git status
echo -e "\033[0;93m=============== Please fix the git status \033[0m"
exit
fi
if [ $# -eq 0 ]; then
git branch -a
read -p 'Enter the new experiment name: ' expName
fi
############### check is there any GIt branch in repository,
# if not create Git Branch, if yes, checkout
echo -e "${YELLOW} 3) ################## Checking/Create Git Branch ${NC}"
pullFlag="K"
isBranchExist=`git branch -a | grep ${expName} | wc -l`
if [ ${expName} == "Master" ]; then
echo "this is the Master experiment name. no branch create. checkout Master"
git checkout Master
isBranchExist=1
else
if [ ${isBranchExist} -eq 0 ]; then
if [ ${PCID} -eq 1 ]; then
echo -e "You are going to create a${GREEN} NEW ${NC}branch ${Cyan}${expName}${NC} from branch : $(git branch --show-current)"
read -p "Are you sure? (Y/N) " createNewBranch
if [ ${createNewBranch} == "Y" ]; then
git checkout -b ${expName}
else
exit
fi
else
echo -e "${Cyan} ONLY the DAQ machines can create branch ${NC}"
fi
else
echo -e "Experimental (branch) Name ${expName} ${GEEN} already exist ${NC}."
echo "Please take another name or git pull origin ${expName}"
read -p "Do you want to checkout origin/${expName} (Y/N):" pullFlag
if [ ${pullFlag} == "N" ]; then
exit
else
git checkout ${expName}
fi
fi
fi
############### set up expName.sh, so that all experimental Name is refered to this name
if [ ${isBranchExist} -eq 0 ]; then
workingDir=$(pwd)"/working/"
expNamePath=$(pwd)"/working/expName.sh"
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echo -e "${YELLOW} 3a) ################## Setting up ${expNamePath} ${NC}"
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if [ ! -d ${workingDir} ]; then
mkdir -p ${workingDir} # create parent directory
fi
touch ${expNamePath}
echo "#!/bin/bash -l" > ${expNamePath}
echo "expName=${expName}" >> ${expNamePath}
echo "rawDataPath=${rawDataPathParent}"/${expName} >> ${expNamePath}
echo "rootDataPath=${rootDataPathParent}"/${expName} >> ${expNamePath}
echo "runID=0" >> ${expNamePath}
echo "elogID=0" >> ${expNamePath}
fi
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echo -e "${YELLOW} 4) ################## making new folders in ${rawDataPathParent} ${NC}"
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rawData=${rawDataPathParent}/${expName}
rootData=${rootDataPathParent}/${expName}
mkdir -v ${rawData}
mkdir -v ${rootData}
############### create symbolic links
echo -e "${YELLOW} 5) ################## creating symbolic links ${NC}"
rm -f data_raw
rm -f root_data
ln -sfv ${rawData} data_raw
ln -sfv ${rootData} root_data
if [ ${PCID} -eq 1 ]; then
############### tell Database SetupNewExp change exp.
echo -e "=================== Tell the database"
haha1=${databaseIP}"/write?db="${databaseName}
haha2="RunID,start=0 value=0,expName=\"${expName}\",comment=\"New_experiment_[${expName}]_was_created\""
#echo $haha1
#echo $haha2
curl -s -v -XPOST "$haha1" --data-binary "$haha2" --max-time 1 --connect-timeout 1
#===== clean up working if it is new
if [ ${isBranchExist} -eq 0 ]; then
echo "======== Clean up working directory "
#rm -fv working/correction_*.dat
rm -fv working/reaction.dat
rm -fv working/run_Summary.dat
rm -fv working/example.*
rm -fv working/RunTimeStamp.dat
rm -fv working/*.root
rm -fv working/*.d
rm -fv working/*.so
rm -fv working/*.pcm
echo "======== git commit "
git add -A
git commit -m "New experiment ${expName}"
echo -e "${YELLOW} 5) ################## git push ${NC}"
git push origin ${expName}
fi
fi
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