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create namespace for Mapping.h, move all mapping related function to mapping.h

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This commit is contained in:
Ryan Tang 2023-04-06 15:10:04 -04:00
parent b8d4f5875a
commit 63fd4687a4
8 changed files with 129 additions and 109 deletions
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58
armory/AnalysisLib.h
View File

@ -5,64 +5,8 @@
#include <vector> #include <vector>
#include <string> #include <string>
#include <TMacro.h> #include <TMacro.h>
#include <TList.h>
int FindDetType(int detID, std::vector<int> detMaxID){
for( int k = 0; k < (int) detMaxID.size(); k++){
int low = (k == 0 ? 0 : detMaxID[k-1]);
int high = detMaxID[k];
if( low <= detID && detID < high ) {
return k;
}
}
return -1;
}
std::vector<int> ExtractDetNum(std::vector<std::vector<int>> mapping, std::vector<std::string> detTypeName, std::vector<int> detMaxID){
std::vector<int> detTypeNum;
for( int i = 0; i < (int) detTypeName.size(); i ++) detTypeNum.push_back(0);
for( int i = 0; i < (int) mapping.size(); i ++){
for( int j = 0; j < (int) mapping[i].size(); j++){
if( mapping[i][j] < 0) continue;
for( int k = 0; k < (int) detTypeName.size() ; k ++ ){
int low = (k == 0 ? 0 : detMaxID[k-1]);
int high = detMaxID[k];
if( low <= mapping[i][j] && mapping[i][j] < high ) {
detTypeNum[k]++;
}
}
}
}
return detTypeNum;
}
void PrintMapping(std::vector<std::vector<int>> mapping, std::vector<std::string> detTypeName, std::vector<int> detMaxID){
//------------ Red Green Yellow Cyan blue Magenta Gray
std::vector<const char* > Color = {"\033[31m", "\033[32m", "\033[33m", "\033[36m", "\033[34m", "\033[35m", "\033[37m"};
printf("==================================== Mapping ===================================\n");
std::vector<int> detTypeNum = ExtractDetNum(mapping, detTypeName, detMaxID);
for(int i = 0 ; i < (int) detTypeName.size(); i++) {
printf(" %2d | %7s | %3d | %3d - %3d\n", i, detTypeName[i].c_str(), detTypeNum[i], (i == 0 ? 0 : detMaxID[i-1]), detMaxID[i]);
}
for( int i = 0; i < (int) mapping.size(); i++){
printf("Digi-%d ------------------------------------------------------------------------ \n", i);
for( int j = 0; j < (int) mapping[i].size(); j++){
if( mapping[i][j] < 0 ){
printf("%4d,", mapping[i][j]);
}else{
int colorIndex = FindDetType(mapping[i][j], detMaxID);
printf("%s%4d\033[0m,", Color[colorIndex], mapping[i][j]);
}
if( j % 16 == 15 ) printf("\n");
}
}
printf("================================================================================\n");
}
struct DetGeo{ struct DetGeo{

9
armory/EventBuilder.cpp
View File

@ -85,9 +85,9 @@ void printEvent(){
//^################################################################################## //^##################################################################################
int main(int argc, char ** argv){ int main(int argc, char ** argv){
printf("=====================================\n"); printf("=======================================================\n");
printf("=== sol --> root ===\n"); printf("=== SOLARIS Event Builder sol --> root ===\n");
printf("=====================================\n"); printf("=======================================================\n");
if( argc <= 3){ if( argc <= 3){
printf("%s [outfile] [timeWindow] [saveTrace] [sol-1] [sol-2] ... \n", argv[0]); printf("%s [outfile] [timeWindow] [saveTrace] [sol-1] [sol-2] ... \n", argv[0]);
@ -318,11 +318,10 @@ int main(int argc, char ** argv){
unsigned int numBlock = 0; unsigned int numBlock = 0;
for( int i = 0; i < nFile; i++){ for( int i = 0; i < nFile; i++){
printf("%d | %8ld | %10u/%10u\n", i, reader[i]->GetBlockID() + 1, reader[i]->GetFilePos(), reader[i]->GetFileSize()); //printf("%d | %8ld | %10u/%10u\n", i, reader[i]->GetBlockID() + 1, reader[i]->GetFilePos(), reader[i]->GetFileSize());
numBlock += reader[i]->GetBlockID() + 1; numBlock += reader[i]->GetBlockID() + 1;
} }
printf("===================================== done. \n"); printf("===================================== done. \n");
printf("Number of Block Scanned : %u\n", numBlock); printf("Number of Block Scanned : %u\n", numBlock);
printf(" Number of Event Built : %lld\n", evID); printf(" Number of Event Built : %lld\n", evID);

27
armory/GeneralSort.C
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@ -21,8 +21,8 @@ Bool_t GeneralSort::Process(Long64_t entry){
if( entry < 1 ) printf("============================== start processing data\n"); if( entry < 1 ) printf("============================== start processing data\n");
///initialization ///initialization
for( int i = 0; i < nDetType; i++){ for( int i = 0; i < mapping::nDetType; i++){
for( int j = 0; j < detNum[i]; j++){ for( int j = 0; j < mapping::detNum[i]; j++){
eE[i][j] = TMath::QuietNaN(); eE[i][j] = TMath::QuietNaN();
eT[i][j] = 0; eT[i][j] = 0;
@ -43,12 +43,12 @@ Bool_t GeneralSort::Process(Long64_t entry){
b_e_t->GetEntry(entry); b_e_t->GetEntry(entry);
for( int i = 0 ; i < multi; i++){ for( int i = 0 ; i < multi; i++){
int detID = mapping[bd[i]][ch[i]]; int detID = mapping::map[bd[i]][ch[i]];
int detType = FindDetType(detID, detMaxID); int detType = mapping::FindDetTypeIndex(detID);
int low = (i == 0 ? 0 : detMaxID[detType-1]); int low = (i == 0 ? 0 : mapping::detMaxID[detType-1]);
int reducedDetID = detID - low; int reducedDetID = detID - low;
eE[detType][reducedDetID] = e[i] * detParity[detType]; eE[detType][reducedDetID] = e[i] * mapping::detParity[detType];
eT[detType][reducedDetID] = e_t[i]; eT[detType][reducedDetID] = e_t[i];
} }
@ -64,7 +64,8 @@ Bool_t GeneralSort::Process(Long64_t entry){
arr->Clear("C"); arr->Clear("C");
for( int i = 0; i < multi; i++){ for( int i = 0; i < multi; i++){
int detID = mapping[bd[i]][ch[i]]; int detID = mapping::map[bd[i]][ch[i]];
int traceLength = tl[i]; int traceLength = tl[i];
gTrace = (TGraph*) arr->ConstructedAt(countTrace, "C"); gTrace = (TGraph*) arr->ConstructedAt(countTrace, "C");
@ -80,6 +81,12 @@ Bool_t GeneralSort::Process(Long64_t entry){
//***=================== fit //***=================== fit
if( traceMethod == 1){ if( traceMethod == 1){
int detType = mapping::FindDetTypeIndex(detID);
//TODO use a blackList
//if( mapping::detTypeName[detType] != "rdt") continue;
//TODO try custom build fiting algorithm. May be faster?
gFit = new TF1("gFit", fitFunc, 0, traceLength, numPara); gFit = new TF1("gFit", fitFunc, 0, traceLength, numPara);
gFit->SetLineColor(6); gFit->SetLineColor(6);
gFit->SetRange(0, traceLength); gFit->SetRange(0, traceLength);
@ -96,9 +103,7 @@ Bool_t GeneralSort::Process(Long64_t entry){
gTrace->Fit("gFit", "QR", "", 0, traceLength); gTrace->Fit("gFit", "QR", "", 0, traceLength);
int low = (i == 0 ? 0 : mapping::detMaxID[detType-1]);
int detType = FindDetType(detID, detMaxID);
int low = (i == 0 ? 0 : detMaxID[detType-1]);
int reducedDetID = detID - low; int reducedDetID = detID - low;
teE[detType][reducedDetID] = gFit->GetParameter(0); teE[detType][reducedDetID] = gFit->GetParameter(0);
@ -174,7 +179,7 @@ void GeneralSort::Begin(TTree * tree){
printf( "===================== SOLARIS GeneralSort.C =================\n"); printf( "===================== SOLARIS GeneralSort.C =================\n");
printf( "=================================================================\n"); printf( "=================================================================\n");
PrintMapping(mapping, detTypeName, detMaxID); mapping::PrintMapping();
DecodeOption(); DecodeOption();
if(!isParallel) { if(!isParallel) {

55
armory/GeneralSort.h
View File

@ -13,6 +13,9 @@
#include <TStopwatch.h> #include <TStopwatch.h>
#include <TProofOutputFile.h> #include <TProofOutputFile.h>
//^######################################### Skip list for trace fitting
//TODO
/*********************************======= /*********************************=======
the sequence of each method the sequence of each method
@ -29,9 +32,8 @@ the sequence of each method
******************************************/ ******************************************/
/// in Process_Sort, copy the GeneralSortMapping.h to ~/.proof/working/ /// in Process_Sort, copy the Mapping.h to ~/.proof/working/
#include "../working/Mapping.h" #include "../working/Mapping.h"
#include "../armory/AnalysisLib.h"
//^######################################### FIT FUNCTION //^######################################### FIT FUNCTION
const int numPara = 6; const int numPara = 6;
@ -132,8 +134,6 @@ public :
traceMethod = 0; // -1 = ignore trace, 0 = no trace fit, 1 = fit, 2 = trapezoid traceMethod = 0; // -1 = ignore trace, 0 = no trace fit, 1 = fit, 2 = trapezoid
isParallel = false; isParallel = false;
detNum.clear();
nDetType = 0;
saveFile = nullptr; saveFile = nullptr;
newSaveTree = nullptr; newSaveTree = nullptr;
@ -175,9 +175,6 @@ public :
void SetTraceMethod(int methodID) {traceMethod = methodID;} void SetTraceMethod(int methodID) {traceMethod = methodID;}
void PrintTraceMethod(); void PrintTraceMethod();
std::vector<int> detNum;
int nDetType;
void SetUpTree(); void SetUpTree();
void DecodeOption(); void DecodeOption();
bool isParallel; bool isParallel;
@ -226,24 +223,22 @@ void GeneralSort::SetUpTree(){
newSaveTree->SetDirectory(saveFile); newSaveTree->SetDirectory(saveFile);
newSaveTree->AutoSave(); newSaveTree->AutoSave();
detNum = ExtractDetNum(mapping, detTypeName, detMaxID); newSaveTree->Branch( "evID", &evID, "EventID/l"); // simply copy
nDetType = (int) detTypeName.size(); eE = new Float_t * [mapping::nDetType];
eT = new ULong64_t * [mapping::nDetType];
eE = new Float_t * [nDetType]; for( int i = 0 ; i < mapping::nDetType; i++){
eT = new ULong64_t * [nDetType]; eE[i] = new Float_t[mapping::detNum[i]];
eT[i] = new ULong64_t[mapping::detNum[i]];
for( int i = 0 ; i < nDetType; i++){ for( int j = 0; j < mapping::detNum[i]; j++){
eE[i] = new Float_t[detNum[i]];
eT[i] = new ULong64_t[detNum[i]];
for( int j = 0; j < detNum[i]; j++){
eE[i][j] = TMath::QuietNaN(); eE[i][j] = TMath::QuietNaN();
eT[i][j] = 0; eT[i][j] = 0;
} }
newSaveTree->Branch( detTypeName[i].c_str(), eE[i], Form("%s[%d]/F", detTypeName[i].c_str(), detNum[i])); newSaveTree->Branch( mapping::detTypeName[i].c_str(), eE[i], Form("%s[%d]/F", mapping::detTypeName[i].c_str(), mapping::detNum[i]));
newSaveTree->Branch( (detTypeName[i]+"_t").c_str(), eT[i], Form("%s_Timestamp[%d]/l", detTypeName[i].c_str(), detNum[i])); newSaveTree->Branch( (mapping::detTypeName[i]+"_t").c_str(), eT[i], Form("%s_Timestamp[%d]/l", mapping::detTypeName[i].c_str(), mapping::detNum[i]));
} }
@ -256,24 +251,26 @@ void GeneralSort::SetUpTree(){
if( traceMethod > 0 ){ if( traceMethod > 0 ){
teE = new Float_t * [nDetType]; teE = new Float_t * [mapping::nDetType];
teT = new Float_t * [nDetType]; teT = new Float_t * [mapping::nDetType];
teR = new Float_t * [nDetType]; teR = new Float_t * [mapping::nDetType];
for( int i = 0 ; i < nDetType; i++){ for( int i = 0 ; i < mapping::nDetType; i++){
teE[i] = new Float_t[detNum[i]]; teE[i] = new Float_t[mapping::detNum[i]];
teT[i] = new Float_t[detNum[i]]; teT[i] = new Float_t[mapping::detNum[i]];
teR[i] = new Float_t[detNum[i]]; teR[i] = new Float_t[mapping::detNum[i]];
for( int j = 0; j < detNum[i]; j++){ for( int j = 0; j <mapping::detNum[i]; j++){
teE[i][j] = TMath::QuietNaN(); teE[i][j] = TMath::QuietNaN();
teT[i][j] = TMath::QuietNaN(); teT[i][j] = TMath::QuietNaN();
teR[i][j] = TMath::QuietNaN(); teR[i][j] = TMath::QuietNaN();
} }
newSaveTree->Branch( ("t" + detTypeName[i]).c_str(), teE[i], Form("trace_%s[%d]/F", detTypeName[i].c_str(), detNum[i])); //TODO use a blackList to skip some trace
newSaveTree->Branch( ("t" + detTypeName[i]+"_t").c_str(), teT[i], Form("trace_%s_time[%d]/l", detTypeName[i].c_str(), detNum[i]));
newSaveTree->Branch( ("t" + detTypeName[i]+"_r").c_str(), teR[i], Form("trace_%s_rise[%d]/l", detTypeName[i].c_str(), detNum[i])); newSaveTree->Branch( ("w" + mapping::detTypeName[i]).c_str(), teE[i], Form("trace_%s[%d]/F", mapping::detTypeName[i].c_str(), mapping::detNum[i]));
newSaveTree->Branch( ("w" + mapping::detTypeName[i]+"T").c_str(), teT[i], Form("trace_%s_time[%d]/l", mapping::detTypeName[i].c_str(), mapping::detNum[i]));
newSaveTree->Branch( ("w" + mapping::detTypeName[i]+"R").c_str(), teR[i], Form("trace_%s_rise[%d]/l", mapping::detTypeName[i].c_str(), mapping::detNum[i]));
} }
} }

15
armory/GeneralSortAgent.C
View File

@ -2,6 +2,8 @@
#include "TTree.h" #include "TTree.h"
#include "TProof.h" #include "TProof.h"
#include "TChain.h" #include "TChain.h"
#include "TMacro.h"
#include "TFile.h"
void GeneralSortAgent(Int_t runNum, int nWorker = 1, int traceMethod = -1){ void GeneralSortAgent(Int_t runNum, int nWorker = 1, int traceMethod = -1){
@ -34,5 +36,18 @@ void GeneralSortAgent(Int_t runNum, int nWorker = 1, int traceMethod = -1){
chain->Process("../armory/GeneralSort.C+", option); chain->Process("../armory/GeneralSort.C+", option);
} }
//========== open the output root and copy teh timestamp Marco
TFile * f1 = new TFile(Form("../root_data/run%03d.root", runNum), "READ");
TMacro * m = (TMacro* ) f1->Get("timeStamp");
m->AddLine(Form("%d", runNum));
TFile * f2 = new TFile(Form("../root_data/gen_run%03d.root", runNum), "UPDATE");
f2->cd();
m->Write("timeStamp");
f1->Close();
f2->Close();
} }

9
armory/Process_Run
View File

@ -11,15 +11,16 @@ fi
if [ $# -eq 0 ] || [ $1 == "-help" ]; then if [ $# -eq 0 ] || [ $1 == "-help" ]; then
echo "$ Process_Run [RunNum] [EventBuild] [GeneralSort] [TraceMethod] [Monitor]" echo "$ Process_Run [RunNum] [EventBuild] [GeneralSort] [TraceMethod] [DataHoSei]"
echo " RunNum = run number / \"lastRun\" " echo " RunNum = run number / \"lastRun\" "
echo " EventBld = 2/1/0/-1/-2 || 2 = with Trace" echo " EventBld = 2/1/0/-1/-2 || 2 = with Trace"
echo " GeneralSort = n/0/-n || n = number of worker" echo " GeneralSort = n/0/-n || n = number of worker"
echo " TraceMethod = -1/0/1/2 || -1 no trace, 0 save trace, 1 fit, 2 trapezoid(not implemented)" echo " TraceMethod = -1/0/1/2 || -1 no trace, 0 save trace, 1 fit, 2 trapezoid(not implemented)"
echo " Monitors = 2/1/0 || 1 = single run, 2 = using the list in ChainMonitors.C" echo " DataHoSei = 2/1/0 || 1 = single run, 2 = using the list in ChainMonitors.C"
echo " 10 = single run and post to websrv, 20 = list runs and post to websrv" echo " 10 = single run and post to websrv, 20 = list runs and post to websrv"
echo "" echo ""
echo " * negative option = force (except for TraceMethod)" echo " * negative option = force (except for TraceMethod)."
echo " * Defult timeWindow for Event builder is 100 tick = 800 ns."
echo "" echo ""
exit 1 exit 1
fi; fi;

2
armory/Process_Sort
View File

@ -65,8 +65,6 @@ else
mkdir -p ~/.proof/working mkdir -p ~/.proof/working
cp ${SOLARISANADIR}/working/Mapping.h ~/.proof/working/. cp ${SOLARISANADIR}/working/Mapping.h ~/.proof/working/.
mkdir -p ~/.proof/armory
cp ${SOLARISANADIR}/armory/AnalysisLib.h ~/.proof/armory/.
if [ $nWorker -le -1 ]; then if [ $nWorker -le -1 ]; then
echo -e "${LRED}>>>>>>>>>>>>>>> Force GeneralSort $(date) ${NC}" echo -e "${LRED}>>>>>>>>>>>>>>> Force GeneralSort $(date) ${NC}"

63
working/Mapping.h
View File

@ -19,6 +19,8 @@
#include <vector> #include <vector>
#include <string> #include <string>
namespace mapping{
const std::vector<std::string> detTypeName = { "e", "xf", "xn", "rdt"}; //C= The comment "//C=" is an indicator DON't Remove const std::vector<std::string> detTypeName = { "e", "xf", "xn", "rdt"}; //C= The comment "//C=" is an indicator DON't Remove
const std::vector<int> detGroupID = { 0, 0, 0, 1}; //C& The comment "//C&" is an indicator DON't Remove const std::vector<int> detGroupID = { 0, 0, 0, 1}; //C& The comment "//C&" is an indicator DON't Remove
const std::vector<int> detMaxID = { 100, 200, 300, 400}; //C# The comment "//C#" is an indicator DON't Remove const std::vector<int> detMaxID = { 100, 200, 300, 400}; //C# The comment "//C#" is an indicator DON't Remove
@ -28,7 +30,7 @@ const std::vector<std::string> groupName = { "Array", "Recoil"}; //C% The commen
//!The mapping[i] must match as the IP setting in the DAQ //!The mapping[i] must match as the IP setting in the DAQ
const std::vector<std::vector<int>> mapping = { const std::vector<std::vector<int>> map = {
{ {
//C 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 // this line is an indicator DON'T Remove "//C " is an indcator //C 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 // this line is an indicator DON'T Remove "//C " is an indcator
0, 100, 200, 1, 101, 201, 2, 102, 202, 3, 103, 203, 4, 104, 204, -1, /// 0 - 15 0, 100, 200, 1, 101, 201, 2, 102, 202, 3, 103, 203, 4, 104, 204, -1, /// 0 - 15
@ -63,4 +65,63 @@ const std::vector<std::vector<int>> mapping = {
} }
}; };
//^===============================================================================
int FindDetTypeIndex(int detID){
for( int k = 0; k < (int) detMaxID.size(); k++){
int low = (k == 0 ? 0 : detMaxID[k-1]);
int high = detMaxID[k];
if( low <= detID && detID < high ) {
return k;
}
}
return -1;
}
std::vector<int> ExtractDetNum(){
std::vector<int> detTypeNum;
for( int i = 0; i < (int) detTypeName.size(); i ++) detTypeNum.push_back(0);
for( int i = 0; i < (int) map.size(); i ++){
for( int j = 0; j < (int) map[i].size(); j++){
if( map[i][j] < 0) continue;
for( int k = 0; k < (int) detTypeName.size() ; k ++ ){
int low = (k == 0 ? 0 : detMaxID[k-1]);
int high = detMaxID[k];
if( low <= map[i][j] && map[i][j] < high ) {
detTypeNum[k]++;
}
}
}
}
return detTypeNum;
}
void PrintMapping(){
//------------ Red Green Yellow Cyan blue Magenta Gray
std::vector<const char* > Color = {"\033[31m", "\033[32m", "\033[33m", "\033[36m", "\033[34m", "\033[35m", "\033[37m"};
printf("==================================== Mapping ===================================\n");
std::vector<int> detTypeNum = ExtractDetNum();
for(int i = 0 ; i < (int) detTypeName.size(); i++) {
printf(" %2d | %7s | %3d | %3d - %3d\n", i, detTypeName[i].c_str(), detTypeNum[i], (i == 0 ? 0 : detMaxID[i-1]), detMaxID[i]);
}
for( int i = 0; i < (int) map.size(); i++){
printf("Digi-%d ------------------------------------------------------------------------ \n", i);
for( int j = 0; j < (int) map[i].size(); j++){
if( map[i][j] < 0 ){
printf("%4d,", map[i][j]);
}else{
int colorIndex = FindDetTypeIndex(map[i][j]);
printf("%s%4d\033[0m,", Color[colorIndex], map[i][j]);
}
if( j % 16 == 15 ) printf("\n");
}
}
printf("================================================================================\n");
}
const std::vector<int> detNum = ExtractDetNum();
const int nDetType = detNum.size();
} // namespace solarismap
#endif #endif