SetupNewExp for DAQ is done
This commit is contained in:
parent
0970fcd77f
commit
797ce8bbfe
242
SetupNewExp
242
SetupNewExp
|
|
@ -1,4 +1,4 @@
|
||||||
#!/bin/bash
|
#!/bin/bash -l
|
||||||
|
|
||||||
|
|
||||||
###################################################
|
###################################################
|
||||||
|
|
@ -10,19 +10,243 @@
|
||||||
####################################################
|
####################################################
|
||||||
|
|
||||||
|
|
||||||
# this will define global enviroment varibales, like the analysis path, export armory
|
RED='\033[1;31m'
|
||||||
source SOLARIS.sh
|
YELLOW='\033[1;33m'
|
||||||
|
ORANGE='\033[0;33m'
|
||||||
|
GREEN='\033[1;32m'
|
||||||
|
BLUE='\033[0;34m'
|
||||||
|
Cyan='\033[0;36m'
|
||||||
|
NC='\033[0m' #no color
|
||||||
|
|
||||||
# Check git
|
|
||||||
|
############## need to distingish mac and daq
|
||||||
|
Arch="$(uname -s)"
|
||||||
|
PCName="$(hostname)"
|
||||||
|
PCID=-1 #if PCID == 1 (DAQ), 2 (MAC), -1(OTHER)
|
||||||
|
|
||||||
|
#------ Set up data folder, check disk space
|
||||||
|
echo -e "${YELLOW} 0) ################## Check computer name and arch. ${NC}"
|
||||||
|
echo "PC name : ${PCName}"
|
||||||
|
echo "Archetech: ${Arch}"
|
||||||
|
|
||||||
|
if [ ${Arch} == "Linux" ] && [ ${PCName} == "solaris-daq" ]; then
|
||||||
|
|
||||||
|
PCID=1
|
||||||
|
|
||||||
|
pathsSetting=${HOME}/SOLARIS_QT6_DAQ/programSettings.txt
|
||||||
|
if [ -e ${pathsSetting} ]; then
|
||||||
|
echo "Found DAQ programSettings.txt for paths settings"
|
||||||
|
|
||||||
|
analysisPath=$(cat ${pathsSetting} | head -n 2 | tail -n 1)
|
||||||
|
|
||||||
|
if [ "${analysisPath}" = "$(pwd)" ]; then
|
||||||
|
echo "The analysisPath from ${analysisPath} is same as the present folder $(pwd)"
|
||||||
|
else
|
||||||
|
echo "The analysisPath from ${analysisPath} is different from present folder $(pwd). Abort."
|
||||||
|
exit
|
||||||
|
fi
|
||||||
|
|
||||||
|
rawDataPathParent=$(cat ${pathsSetting} | head -n 3 | tail -n 1)
|
||||||
|
rootDataPathParent=$(cat ${pathsSetting} | head -n 4 | tail -n 1)
|
||||||
|
|
||||||
|
databaseIP=$(cat ${pathsSetting} | head -n 6 | tail -n 1)
|
||||||
|
databaseName=$(cat ${pathsSetting} | head -n 7 | tail -n 1)
|
||||||
|
|
||||||
|
#echo ${rawDataPathParent}
|
||||||
|
#echo ${rootDataPathParent}
|
||||||
|
#echo ${databaseIP}
|
||||||
|
#echo ${databaseName}
|
||||||
|
|
||||||
|
else
|
||||||
|
|
||||||
|
echo "${RED} Cannot found DAQ programSettings.txt for path settings ${NC}"
|
||||||
|
echo "Seek Ryan for help"
|
||||||
|
exit
|
||||||
|
|
||||||
|
fi
|
||||||
|
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
if [ ${Arch} == "Darwin" ] && [ ${PCName} == "SOLARISs-Mac-Studio.local" ]; then
|
||||||
|
PCID=2
|
||||||
|
fi
|
||||||
|
|
||||||
|
############### Check is git exist
|
||||||
|
isGitExist=0
|
||||||
|
if [ -d $(pwd)/".git" ]; then
|
||||||
|
echo -e "Git repository exists."
|
||||||
|
else
|
||||||
|
echo -e "Git repository does not exist. Abort."
|
||||||
|
if [ ${PCID} -eq 1 ]; then
|
||||||
|
echo -e "Use SOLARIS DAQ to setup new experiment"
|
||||||
|
fi
|
||||||
|
exit
|
||||||
|
fi
|
||||||
|
|
||||||
|
if [ ${PCID} -eq 1 ]; then
|
||||||
|
echo -e "================================================ ${YELLOW}SOLARIS DAQ ${NC}"
|
||||||
|
elif [ ${PCID} -eq 2 ]; then
|
||||||
|
echo -e "================================================ ${YELLOW}SOLARIS MAC ${NC}"
|
||||||
|
else
|
||||||
|
echo -e "================================================ ${YELLOW}Other PC ${NC}"
|
||||||
|
fi
|
||||||
|
echo " The bach script do following things "
|
||||||
|
echo " 1) git-fetch "
|
||||||
|
echo " 2) check repository is clean"
|
||||||
|
echo " 3) check is git branch exist"
|
||||||
|
echo " branch exist --> git checkout "
|
||||||
|
echo " branch not exist --> create expName.sh"
|
||||||
|
echo " 4) making directories for data, root_data"
|
||||||
|
echo " 5) create symbolic links to data, root_data"
|
||||||
|
echo " 6) Tell Database SetupNewExp change exp. (only from the DAQ)"
|
||||||
|
echo " 7) git push (if new exp.)"
|
||||||
|
echo "============================================================="
|
||||||
|
|
||||||
|
|
||||||
|
expName=$1
|
||||||
|
|
||||||
|
############### this will define global enviroment varibales, like the analysis path, export armory
|
||||||
|
#source SOLARIS.sh
|
||||||
|
|
||||||
|
############### Check git
|
||||||
|
echo -e "${YELLOW} 1) ################## Git Fetch ${NC}"
|
||||||
|
echo "when password is needed, please edit .git/config"
|
||||||
|
git fetch
|
||||||
|
|
||||||
|
echo -e "${YELLOW} 2) ################## Checking git repository is clean or not.... ${NC}"
|
||||||
|
gitCheck=`git status --porcelain --untracked-files=no | wc -l`
|
||||||
|
if [ ${gitCheck} -eq 0 ]; then
|
||||||
|
echo "---- clean."
|
||||||
|
else
|
||||||
|
git status
|
||||||
|
echo -e "\033[0;93m=============== Please fix the git status \033[0m"
|
||||||
|
exit
|
||||||
|
fi
|
||||||
|
|
||||||
|
if [ $# -eq 0 ]; then
|
||||||
|
git branch -a
|
||||||
|
read -p 'Enter the new experiment name: ' expName
|
||||||
|
fi
|
||||||
|
|
||||||
|
############### check is there any GIt branch in repository,
|
||||||
|
# if not create Git Branch, if yes, checkout
|
||||||
|
echo -e "${YELLOW} 3) ################## Checking/Create Git Branch ${NC}"
|
||||||
|
pullFlag="K"
|
||||||
|
isBranchExist=`git branch -a | grep ${expName} | wc -l`
|
||||||
|
if [ ${expName} == "Master" ]; then
|
||||||
|
echo "this is the Master experiment name. no branch create. checkout Master"
|
||||||
|
git checkout Master
|
||||||
|
isBranchExist=1
|
||||||
|
else
|
||||||
|
|
||||||
|
if [ ${isBranchExist} -eq 0 ]; then
|
||||||
|
|
||||||
|
if [ ${PCID} -eq 1 ]; then
|
||||||
|
|
||||||
|
echo -e "You are going to create a${GREEN} NEW ${NC}branch ${Cyan}${expName}${NC} from branch : $(git branch --show-current)"
|
||||||
|
read -p "Are you sure? (Y/N) " createNewBranch
|
||||||
|
if [ ${createNewBranch} == "Y" ]; then
|
||||||
|
git checkout -b ${expName}
|
||||||
|
else
|
||||||
|
exit
|
||||||
|
fi
|
||||||
|
|
||||||
|
else
|
||||||
|
|
||||||
|
echo -e "${Cyan} ONLY the DAQ machines can create branch ${NC}"
|
||||||
|
|
||||||
|
fi
|
||||||
|
|
||||||
|
else
|
||||||
|
echo -e "Experimental (branch) Name ${expName} ${GEEN} already exist ${NC}."
|
||||||
|
echo "Please take another name or git pull origin ${expName}"
|
||||||
|
read -p "Do you want to checkout origin/${expName} (Y/N):" pullFlag
|
||||||
|
if [ ${pullFlag} == "N" ]; then
|
||||||
|
exit
|
||||||
|
else
|
||||||
|
git checkout ${expName}
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
#need to distingish mac and daq
|
|
||||||
|
############### set up expName.sh, so that all experimental Name is refered to this name
|
||||||
|
if [ ${isBranchExist} -eq 0 ]; then
|
||||||
|
|
||||||
|
workingDir=$(pwd)"/working/"
|
||||||
|
expNamePath=$(pwd)"/working/expName.sh"
|
||||||
|
echo -e "${YELLOW} 4) ################## Setting up ${expNamePath} ${NC}"
|
||||||
|
|
||||||
|
if [ ! -d ${workingDir} ]; then
|
||||||
|
mkdir -p ${workingDir} # create parent directory
|
||||||
|
fi
|
||||||
|
|
||||||
|
touch ${expNamePath}
|
||||||
|
echo "#!/bin/bash -l" > ${expNamePath}
|
||||||
|
echo "expName=${expName}" >> ${expNamePath}
|
||||||
|
echo "rawDataPath=${rawDataPathParent}"/${expName} >> ${expNamePath}
|
||||||
|
echo "rootDataPath=${rootDataPathParent}"/${expName} >> ${expNamePath}
|
||||||
|
echo "runID=0" >> ${expNamePath}
|
||||||
|
echo "elogID=0" >> ${expNamePath}
|
||||||
|
fi
|
||||||
|
|
||||||
|
echo -e "----------- making new folders in ${rawDataPathParent}"
|
||||||
|
rawData=${rawDataPathParent}/${expName}
|
||||||
|
rootData=${rootDataPathParent}/${expName}
|
||||||
|
|
||||||
|
mkdir -v ${rawData}
|
||||||
|
mkdir -v ${rootData}
|
||||||
|
|
||||||
|
############### create symbolic links
|
||||||
|
echo -e "${YELLOW} 5) ################## creating symbolic links ${NC}"
|
||||||
|
rm -f data_raw
|
||||||
|
rm -f root_data
|
||||||
|
|
||||||
|
ln -sfv ${rawData} data_raw
|
||||||
|
ln -sfv ${rootData} root_data
|
||||||
|
|
||||||
|
|
||||||
#create working/expName.sh
|
if [ ${PCID} -eq 1 ]; then
|
||||||
|
|
||||||
|
############### tell Database SetupNewExp change exp.
|
||||||
|
|
||||||
|
echo -e "=================== Tell the database"
|
||||||
|
|
||||||
|
haha1=${databaseIP}"/write?db="${databaseName}
|
||||||
|
haha2="RunID,start=0 value=0,expName=\"${expName}\",comment=\"New_experiment_[${expName}]_was_created\""
|
||||||
|
|
||||||
|
#echo $haha1
|
||||||
|
#echo $haha2
|
||||||
|
|
||||||
|
curl -s -v -XPOST "$haha1" --data-binary "$haha2" --max-time 1 --connect-timeout 1
|
||||||
|
|
||||||
|
#===== clean up working if it is new
|
||||||
|
if [ ${isBranchExist} -eq 0 ]; then
|
||||||
|
|
||||||
|
echo "======== Clean up working directory "
|
||||||
|
#rm -fv working/correction_*.dat
|
||||||
|
rm -fv working/reaction.dat
|
||||||
|
rm -fv working/run_Summary.dat
|
||||||
|
rm -fv working/example.*
|
||||||
|
rm -fv working/RunTimeStamp.dat
|
||||||
|
rm -fv working/*.root
|
||||||
|
rm -fv working/*.d
|
||||||
|
rm -fv working/*.so
|
||||||
|
rm -fv working/*.pcm
|
||||||
|
|
||||||
|
echo "======== git commit "
|
||||||
|
git add -A
|
||||||
|
git commit -m "New experiment ${expName}"
|
||||||
|
|
||||||
|
echo -e "${YELLOW} 5) ################## git push ${NC}"
|
||||||
|
git push origin ${expName}
|
||||||
|
|
||||||
|
fi
|
||||||
|
|
||||||
|
fi
|
||||||
|
|
||||||
|
|
||||||
# create folders
|
|
||||||
# data_raw = /mnt/data0/${expName}
|
|
||||||
# root_data = /mnt/data1/${expName}
|
|
||||||
|
|
||||||
|
|
|
||||||
Loading…
Reference in New Issue
Block a user