Make EventBuilder, skip the *.to file. clean up armory
This commit is contained in:
parent
b44e63377a
commit
a727af0b48
1
.gitignore
vendored
1
.gitignore
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@ -15,6 +15,7 @@ MergeEVT
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evt2hist
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evt2hist
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ev22txt
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ev22txt
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EventBuilder
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EventBuilder
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EventBuilder2
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*.so
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*.so
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*.d
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*.d
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11
.vscode/c_cpp_properties.json
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11
.vscode/c_cpp_properties.json
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@ -14,6 +14,17 @@
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"cStandard": "c17",
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"cStandard": "c17",
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"cppStandard": "c++17",
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"cppStandard": "c++17",
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"intelliSenseMode": "macos-clang-arm64"
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"intelliSenseMode": "macos-clang-arm64"
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},
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{
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"name": "Ryan",
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"includePath": [
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"${workspaceFolder}/**",
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"/opt/root/**"
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],
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"defines": [],
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"compilerPath": "/usr/bin/clang",
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"cStandard": "c17",
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"cppStandard": "c++17"
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}
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}
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],
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],
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"version": 4
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"version": 4
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31
.vscode/settings.json
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31
.vscode/settings.json
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@ -64,6 +64,35 @@
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"unordered_set": "cpp",
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"unordered_set": "cpp",
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"valarray": "cpp",
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"valarray": "cpp",
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"variant": "cpp",
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"variant": "cpp",
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"vector": "cpp"
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"vector": "cpp",
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"any": "cpp",
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"atomic": "cpp",
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"strstream": "cpp",
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"bit": "cpp",
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"*.tcc": "cpp",
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"chrono": "cpp",
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"codecvt": "cpp",
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"compare": "cpp",
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"concepts": "cpp",
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"exception": "cpp",
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"functional": "cpp",
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"iterator": "cpp",
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"memory": "cpp",
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"memory_resource": "cpp",
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"numeric": "cpp",
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"random": "cpp",
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"source_location": "cpp",
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"system_error": "cpp",
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"type_traits": "cpp",
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"utility": "cpp",
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"format": "cpp",
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"numbers": "cpp",
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"ranges": "cpp",
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"semaphore": "cpp",
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"stop_token": "cpp",
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"thread": "cpp",
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"cfenv": "cpp",
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"cinttypes": "cpp",
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"typeindex": "cpp"
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}
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}
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}
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}
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@ -1,7 +1,13 @@
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/*==================
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Thie event builder both sort and build event. skip the *.to file.
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===================*/
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#include <stdio.h>
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#include <stdio.h>
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#include <stdlib.h>
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#include <stdlib.h>
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#include <string.h>
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#include <string.h>
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#include <math.h>
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#include <cmath>
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#include <stdbool.h>
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#include <stdbool.h>
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#include "TFile.h"
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#include "TFile.h"
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@ -11,170 +17,220 @@
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#include "TStopwatch.h"
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#include "TStopwatch.h"
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#include "TTreeIndex.h"
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#include "TTreeIndex.h"
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#include "../mapping.h"
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#include <sys/time.h> /** struct timeval, select() */
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inline unsigned int getTime_us(){
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unsigned int time_us;
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struct timeval t1;
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struct timezone tz;
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gettimeofday(&t1, &tz);
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time_us = (t1.tv_sec) * 1000 * 1000 + t1.tv_usec;
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return time_us;
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}
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// #include <chrono>
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// inline unsigned long long getTime_ns(){
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// std::chrono::high_resolution_clock::time_point currentTime = std::chrono::high_resolution_clock::now();
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// std::chrono::nanoseconds nanoseconds = std::chrono::duration_cast<std::chrono::nanoseconds>(currentTime.time_since_epoch());
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// return nanoseconds.count();
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// }
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#include "evtReader.h"
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#define MAXMULTI 100
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#define MAXMULTI 100
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#define BUFFERSIZE 1000000 // number of time and filePos in buffer
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#define DEBUG 0
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int main(int argn, char **argv){
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int main(int argn, char **argv){
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printf("=====================================\n");
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printf("=====================================\n");
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printf("=== Event Builder from *_raw.root ===\n");
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printf("=== Event Builder from *.evt ===\n");
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printf("=====================================\n");
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printf("=====================================\n");
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if (argn != 2 && argn != 3 && argn != 4 ) {
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if (argn < 6 ) {
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printf("Usage :\n");
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printf("Usage :\n");
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printf("%s [_raw.root File] <timeWindows> <SaveFileName>\n", argv[0]);
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printf("%s [timeWindows] [mapping file] [Reject Flag] [SaveFileName] [*.evt File1] [*.evt File2] ...\n", argv[0]);
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printf(" timeWindows : default = 100 \n");
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printf(" timeWindows [int]: 1 unit = 10 ns \n");
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printf(" SaveFileName : default is *.root \n");
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printf(" mapping file path [str]: the path of mapping file. \n");
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printf(" Reject Flag [int]: 0 = no rejection, 1 = reject no gamma, 2 = reject no GAGG. see mapping.h\n");
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printf(" SaveFileName [str]: custom save file name \n");
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return 1;
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return 1;
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}
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}
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TString inFileName = argv[1]; // need to check name
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int timeWindow = atoi(argv[1]);
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int timeWindow = 100;
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TString mappingFilePath = argv[2];
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if( argn >= 3 ) timeWindow = atoi(argv[2]);
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unsigned short rejectFlag = atoi(argv[3]);
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TString outFileName = argv[4];
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printf(">>> Opening input %s \n", inFileName.Data());
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std::vector<std::string> inFileList;
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TFile * inFile = new TFile(inFileName, "READ");
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for( int i = 5; i < argn; i++) inFileList.push_back(argv[i]);
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if( inFile->IsOpen() == false ) {
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printf("!!!! cannot open file %s \n", inFileName.Data());
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printf(" Mapping file Path : %s \n", mappingFilePath.Data());
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return 0;
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printf(" Time window : %d ticks\n", timeWindow);
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printf(" Reject Flag : %u \n", rejectFlag);
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printf(" outfile Name : %s \n", outFileName.Data());
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printf("--------------- Number of in files %ld \n", inFileList.size());
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for( size_t i = 0; i < inFileList.size(); i++){
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printf("%2ld | %s \n", i, inFileList[i].c_str());
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}
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}
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TTree * tree = (TTree *) inFile->Get("tree");
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printf("================================== Digesting Mapping file (to be impletmented\n");
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Long64_t evID;
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UShort_t detID;
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UShort_t energy;
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ULong64_t energy_t;
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TBranch *b_data_ID; //!
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TBranch *b_ID; //!
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TBranch *b_energy; //!
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TBranch *b_energy_timestamp; //!
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tree->SetBranchAddress("evID", &evID, &b_data_ID);
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tree->SetBranchAddress("id", &detID, &b_ID);
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tree->SetBranchAddress("e", &energy, &b_energy);
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tree->SetBranchAddress("e_t", &energy_t, &b_energy_timestamp);
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Long64_t totnumEntry = tree->GetEntries();
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printf(" total Entry : %lld \n", totnumEntry);
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printf("================================== Creating Tree\n");
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printf(" event Build window: %d tick = %d nsec \n", timeWindow, timeWindow * 10);
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printf(">>> Buidling Index using the timestamp\n");
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tree->BuildIndex("e_t");
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TTreeIndex *in = (TTreeIndex*) tree->GetTreeIndex();
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Long64_t * index = in->GetIndex();
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ULong64_t time0; //time-0 for each event
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int timeDiff;
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TString outFileName = inFileName;
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outFileName.Remove(inFileName.First("_raw"));
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outFileName.Append(".root");
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if( argn >=4 ) outFileName = argv[3];
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printf(">>> out File name : \033[1;31m%s\033[m\n", outFileName.Data());
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printf(">>> Create output tree\n");
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printf(">>> Create output tree\n");
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TFile * saveFile = new TFile(outFileName, "recreate");
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TFile * saveFile = new TFile(outFileName, "recreate");
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saveFile->cd();
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TTree * newtree = new TTree("tree", outFileName);
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TTree * newtree = new TTree("tree", outFileName);
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Int_t eventID = 0 ;
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UInt_t eventID = 0 ;
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Int_t multi = 0; /// this is total multipicilty for all detectors
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UInt_t multi = 0; /// this is total multipicilty for all detectors
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newtree->Branch("multi", &multi, "multi/I");
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newtree->Branch("multi", &multi, "multi/i");
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newtree->Branch("evID", &eventID, "event_ID/i");
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// Int_t multiCry = 0 ; /// thi is total multiplicity for all crystal
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// newtree->Branch("multiCry", &multiCry, "multiplicity_crystal/I");
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newtree->Branch("evID", &eventID, "event_ID/l");
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UInt_t id[MAXMULTI] = {0};
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Int_t e[MAXMULTI] = {-1};
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Int_t multiCry = 0 ; /// thi is total multiplicity for all crystal
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newtree->Branch("multiCry", &multiCry, "multiplicity_crystal/I");
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int id[MAXMULTI] = {0};
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double e[MAXMULTI] = {TMath::QuietNaN()};
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ULong64_t e_t[MAXMULTI] = {0};
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ULong64_t e_t[MAXMULTI] = {0};
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newtree->Branch("id", id, "id[multi]/I" );
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newtree->Branch("id", id, "id[multi]/i" );
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newtree->Branch("e", e, "e[multi]/D" );
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newtree->Branch("e", e, "e[multi]/I" );
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newtree->Branch("e_t", e_t, "e_timestamp[multi]/l");
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newtree->Branch("e_t", e_t, "e_timestamp[multi]/l");
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saveFile->cd();
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printf("================== Start processing....\n");
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printf("================== Start processing....\n");
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Float_t Frac = 0.05; ///Progress bar
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Float_t Frac = 0.05; ///Progress bar
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TStopwatch StpWatch;
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TStopwatch StpWatch;
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StpWatch.Start();
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StpWatch.Start();
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int multiOverflow = 0;
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std::vector<timePos> hitList;
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evtReader * reader = nullptr;
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std::vector<DataBlock> event;
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event.clear();
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unsigned long int totalBlock;
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unsigned long int blockCount = 0 ;
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for( Long64_t entry = 0; entry < totnumEntry; entry++){
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unsigned long long tStart = 0;
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unsigned long long tEnd = 0;
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/*********** Progress Bar ******************************************/
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unsigned int runStartTime = getTime_us();
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if (entry>totnumEntry*Frac-1) {
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TString msg; msg.Form("%llu", totnumEntry/1000);
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for( size_t i = 0 ; i < inFileList.size(); i++){
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int len = msg.Sizeof();
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printf(" %3.0f%% (%*llu/%llu k) processed in %6.1f sec | expect %6.1f sec\n",
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reader = new evtReader(inFileList[i]);
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Frac*100, len, entry/1000,totnumEntry/1000,StpWatch.RealTime(), StpWatch.RealTime()/Frac);
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reader->ScanNumberOfBlock();
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StpWatch.Start(kFALSE);
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totalBlock = reader->GetNumberOfBlock();
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Frac+=0.1;
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blockCount = 0;
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do{
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hitList = reader->ReadBatchPos(BUFFERSIZE, DEBUG);
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blockCount += hitList.size();
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printf(" %lu block %lu / %lu | %u \n", hitList.size(), blockCount, totalBlock, eventID);
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if( hitList.size() == 0 ) break;
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for( size_t k = 0; k < hitList.size(); k++ ){
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reader->ReadBlockAtPos(hitList[k].inFilePos);
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if( eventID == 0 ) tStart = reader->data->time;
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if( event.size() == 0 ) {
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event.push_back(*(reader->data));
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if( timeWindow < 0 ) { // no event build
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multi = 1;
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e[0] = event[0].energy;
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e_t[0] = event[0].time;
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if( DEBUG ){
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printf("====================== event %u, event size %u\n", eventID, multi);
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printf("%6d, %12llu \n", event[0].energy, event[0].time);
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}
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}
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Long64_t ev = index[entry];
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saveFile->cd();
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newtree->Fill();
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b_ID->GetEntry(ev, 0);
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eventID ++;
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b_energy->GetEntry(ev, 0);
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event.clear();
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b_energy_timestamp->GetEntry(ev, 0);
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if( time0 == 0) {
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time0 = energy_t;
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multi = 0;
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}
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}
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timeDiff = (int) (energy_t - time0);
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if( timeDiff < timeWindow ) {
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continue;
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if( multi > MAXMULTI ){
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multiOverflow++;
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}else{
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}else{
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id[multi] = detID;
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e[multi] = energy;
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if( hitList[k].time - event.front().time <= timeWindow ){
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e_t[multi] = energy_t;
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event.push_back(*(reader->data));
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multi ++;
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if( detID < NCRYSTAL ) multiCry++;
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}
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}else{
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}else{
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///---- end of event
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//save event
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multi = event.size();
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if( DEBUG ) printf("====================== event %u, event size %u\n", eventID, multi);
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for( size_t p = 0; p < multi; p++ ) {
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if( DEBUG ) printf("%lu | %6d, %12llu \n", p, event[p].energy, event[p].time);
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e[p] = event[p].energy;
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e_t[p] = event[p].time;
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}
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saveFile->cd();
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newtree->Fill();
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eventID ++;
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//clear event
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event.clear();
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event.push_back(*(reader->data));
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}
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}
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}
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}while(true);
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tEnd = reader->data->time;
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delete reader;
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}
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//save the last event
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if( timeWindow >= 0 ){
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multi = event.size();
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for( size_t p = 0; p < multi; p++ ) {
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if( DEBUG ) printf("%lu | %6d, %12llu \n", p, event[p].energy, event[p].time);
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e[p] = event[p].energy;
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e_t[p] = event[p].time;
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}
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saveFile->cd();
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saveFile->cd();
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newtree->Fill();
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newtree->Fill();
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eventID ++;
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eventID ++;
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///---- clear data
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for( int i = 0; i < MAXMULTI ; i ++){
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id[i] = 0;
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e[i] = TMath::QuietNaN();
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e_t[i] = 0;
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}
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multi = 0;
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multiCry = 0;
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/// fill 1st data of an event
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time0 = energy_t;
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timeDiff = 0;
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id[multi] = detID;
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e[multi] = energy;
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e_t[multi] = energy_t;
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multi++;
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if( detID < NCRYSTAL ) multiCry++;
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}
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}
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}
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|
|
||||||
printf("============================== finished.\n");
|
|
||||||
|
|
||||||
saveFile->cd();
|
|
||||||
newtree->Write();
|
newtree->Write();
|
||||||
|
|
||||||
|
unsigned int runEndTime = getTime_us();
|
||||||
|
double runTime = (runEndTime - runStartTime) * 1e-6;
|
||||||
|
printf("========================================= finished.\n");
|
||||||
|
printf(" event building time = %.2f sec = %.2f min\n", runTime, runTime/60.);
|
||||||
|
printf(" total events built = %u by event builder (%llu in tree)\n", eventID , newtree->GetEntriesFast());
|
||||||
|
double tDuration_sec = (tEnd - tStart) * 1e-9;
|
||||||
|
printf(" first timestamp = %20llu ns\n", tStart);
|
||||||
|
printf(" last timestamp = %20llu ns\n", tEnd);
|
||||||
|
printf(" total data duration = %.2f sec = %.2f min\n", tDuration_sec, tDuration_sec/60.);
|
||||||
|
printf("==============> saved to %s \n", outFileName.Data());
|
||||||
|
|
||||||
|
// TMacro info;
|
||||||
|
// info.AddLine(Form("tStart= %20llu ns",tStart));
|
||||||
|
// info.AddLine(Form(" tEnd= %20llu ns",tEnd));
|
||||||
|
// info.Write("info");
|
||||||
|
|
||||||
saveFile->Close();
|
saveFile->Close();
|
||||||
|
|
||||||
printf(" total number of event Built : %d \n", eventID);
|
|
||||||
printf(" total event has multi > %6d : %d \n", MAXMULTI, multiOverflow);
|
return 0;
|
||||||
}
|
}
|
|
@ -1,68 +0,0 @@
|
||||||
/*==================
|
|
||||||
|
|
||||||
Thie event builder both sort and build event. skip the *.to file.
|
|
||||||
|
|
||||||
===================*/
|
|
||||||
|
|
||||||
#include <stdio.h>
|
|
||||||
#include <stdlib.h>
|
|
||||||
#include <string.h>
|
|
||||||
#include <cmath>
|
|
||||||
#include <stdbool.h>
|
|
||||||
|
|
||||||
#include "TFile.h"
|
|
||||||
#include "TTree.h"
|
|
||||||
#include "TMath.h"
|
|
||||||
#include "TBenchmark.h"
|
|
||||||
#include "TStopwatch.h"
|
|
||||||
#include "TTreeIndex.h"
|
|
||||||
|
|
||||||
#include "../mapping.h"
|
|
||||||
|
|
||||||
#include "evtReader.h"
|
|
||||||
|
|
||||||
#define MAXMULTI 100
|
|
||||||
#define MAXBUFFER 100 // number of hit in memory buffer
|
|
||||||
|
|
||||||
int main(int argn, char **argv){
|
|
||||||
printf("=====================================\n");
|
|
||||||
printf("=== Event Builder from *.evt ===\n");
|
|
||||||
printf("=====================================\n");
|
|
||||||
|
|
||||||
if (argn < 5 ) {
|
|
||||||
printf("Usage :\n");
|
|
||||||
printf("%s [timeWindows] [Reject Flag] [SaveFileName] [*.evt File1 [*.evt File2] ...\n", argv[0]);
|
|
||||||
printf(" timeWindows [int]: 1 unit = 10 ns \n");
|
|
||||||
printf(" Reject Flag [int]: 0 = no rejection, 1 = reject no gamma, 2 = reject no GAGG. see mapping.h\n");
|
|
||||||
printf(" SaveFileName [str]: custom save file name \n");
|
|
||||||
return 1;
|
|
||||||
}
|
|
||||||
|
|
||||||
unsigned short timeWindow = atoi(argv[1]);
|
|
||||||
unsigned short rejectFlag = atoi(argv[2]);
|
|
||||||
TString outFileName = argv[3];
|
|
||||||
|
|
||||||
std::vector<std::string> inFileList;
|
|
||||||
for( int i = 4; i < argn; i++) inFileList.push_back(argv[i]);
|
|
||||||
|
|
||||||
//========== put data into RAM buffer.
|
|
||||||
std::vector<DataBlock> hitListA, hitListB;
|
|
||||||
evtReader * reader = nullptr;
|
|
||||||
|
|
||||||
for( size_t i = 0 ; i < inFileList.size(); i++){
|
|
||||||
|
|
||||||
reader = new evtReader(inFileList[i]);
|
|
||||||
reader->ScanNumberOfBlock();
|
|
||||||
|
|
||||||
reader->ReadBatchDataAndSort(MAXBUFFER);
|
|
||||||
hitListA = reader->GetDataList();
|
|
||||||
|
|
||||||
reader->ReadBatchDataAndSort(MAXBUFFER);
|
|
||||||
hitListB = reader->GetDataList();
|
|
||||||
|
|
||||||
delete reader;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
return 0;
|
|
||||||
}
|
|
|
@ -1,206 +0,0 @@
|
||||||
#include <stdio.h>
|
|
||||||
#include <stdlib.h>
|
|
||||||
#include <string.h>
|
|
||||||
#include <math.h>
|
|
||||||
#include <stdbool.h>
|
|
||||||
|
|
||||||
#include "TFile.h"
|
|
||||||
#include "TTree.h"
|
|
||||||
#include "TMath.h"
|
|
||||||
#include "TBenchmark.h"
|
|
||||||
#include "TStopwatch.h"
|
|
||||||
#include "TTreeIndex.h"
|
|
||||||
|
|
||||||
#include "../mapping.h"
|
|
||||||
|
|
||||||
Int_t eventID = 0 ;
|
|
||||||
double e[NCRYSTAL];
|
|
||||||
ULong64_t e_t[NCRYSTAL];
|
|
||||||
double bgo[NBGO];
|
|
||||||
ULong64_t bgo_t[NBGO];
|
|
||||||
Short_t other[NOTHER];
|
|
||||||
Short_t multi;
|
|
||||||
|
|
||||||
void ClearTreeData(){
|
|
||||||
|
|
||||||
for( int i = 0; i < NCRYSTAL; i++){
|
|
||||||
e[i] = TMath::QuietNaN();
|
|
||||||
e_t[i] = 0;
|
|
||||||
//pileup[i] = 0;
|
|
||||||
//hit[i] = 0;
|
|
||||||
}
|
|
||||||
for( int i = 0; i < NBGO; i++) {
|
|
||||||
bgo[i] = TMath::QuietNaN();
|
|
||||||
bgo_t[i] = 0 ;
|
|
||||||
}
|
|
||||||
for( int i = 0; i < NOTHER; i++) {
|
|
||||||
other[i] = TMath::QuietNaN();
|
|
||||||
}
|
|
||||||
multi = 0;
|
|
||||||
}
|
|
||||||
|
|
||||||
int main(int argn, char **argv){
|
|
||||||
printf("=====================================\n");
|
|
||||||
printf("=== Event Builder ===\n");
|
|
||||||
printf("=====================================\n");
|
|
||||||
|
|
||||||
if (argn != 2 && argn != 3 && argn != 4 ) {
|
|
||||||
printf("Usage :\n");
|
|
||||||
printf("%s [_raw.root File] <timeWindows> <SaveFileName>\n", argv[0]);
|
|
||||||
printf(" timeWindows : default = 100 \n");
|
|
||||||
printf(" SaveFileName : default is *.root \n");
|
|
||||||
return 1;
|
|
||||||
}
|
|
||||||
|
|
||||||
TString inFileName = argv[1]; // need to check name
|
|
||||||
int timeWindow = 100;
|
|
||||||
if( argn >= 3 ) timeWindow = atoi(argv[2]);
|
|
||||||
|
|
||||||
printf(">>> Opening input %s \n", inFileName.Data());
|
|
||||||
TFile * inFile = new TFile(inFileName, "READ");
|
|
||||||
if( inFile->IsOpen() == false ) {
|
|
||||||
printf("!!!! cannot open file %s \n", inFileName.Data());
|
|
||||||
return 0;
|
|
||||||
}
|
|
||||||
|
|
||||||
TTree * tree = (TTree *) inFile->Get("tree");
|
|
||||||
|
|
||||||
Long64_t evID;
|
|
||||||
UShort_t detID;
|
|
||||||
UShort_t energy;
|
|
||||||
ULong64_t energy_t;
|
|
||||||
|
|
||||||
TBranch *b_data_ID; //!
|
|
||||||
TBranch *b_ID; //!
|
|
||||||
TBranch *b_energy; //!
|
|
||||||
TBranch *b_energy_timestamp; //!
|
|
||||||
|
|
||||||
tree->SetBranchAddress("evID", &evID, &b_data_ID);
|
|
||||||
tree->SetBranchAddress("id", &detID, &b_ID);
|
|
||||||
tree->SetBranchAddress("e", &energy, &b_energy);
|
|
||||||
tree->SetBranchAddress("e_t", &energy_t, &b_energy_timestamp);
|
|
||||||
|
|
||||||
Long64_t totnumEntry = tree->GetEntries();
|
|
||||||
|
|
||||||
printf( "total Entry : %lld \n", totnumEntry);
|
|
||||||
|
|
||||||
printf(">>> Buidling Index using the timestamp\n");
|
|
||||||
tree->BuildIndex("e_t");
|
|
||||||
TTreeIndex *in = (TTreeIndex*) tree->GetTreeIndex();
|
|
||||||
Long64_t * index = in->GetIndex();
|
|
||||||
|
|
||||||
ULong64_t time0; //time-0 for each event
|
|
||||||
int timeDiff;
|
|
||||||
|
|
||||||
|
|
||||||
TString outFileName = inFileName;
|
|
||||||
outFileName.Remove(inFileName.First("_raw"));
|
|
||||||
outFileName.Append(".root");
|
|
||||||
if( argn >=4 ) outFileName = argv[3];
|
|
||||||
|
|
||||||
printf(">>> out File name : %s\n", outFileName.Data());
|
|
||||||
|
|
||||||
printf(">>> Create output tree\n");
|
|
||||||
TFile * saveFile = new TFile(outFileName, "recreate");
|
|
||||||
saveFile->cd();
|
|
||||||
TTree * newtree = new TTree("tree", "tree");
|
|
||||||
|
|
||||||
newtree->Branch("evID", &eventID, "event_ID/l");
|
|
||||||
newtree->Branch("e", e, Form("e[%d]/D", NCRYSTAL));
|
|
||||||
newtree->Branch("e_t", e_t, Form("e_timestamp[%d]/l", NCRYSTAL));
|
|
||||||
//newtree->Branch("p", pileup, Form("pile_up_flag[%d]/s", NCRYSTAL));
|
|
||||||
//newtree->Branch("hit", hit, Form("hit[%d]/s", NCRYSTAL));
|
|
||||||
|
|
||||||
newtree->Branch("bgo", bgo, Form("BGO_e[%d]/D", NBGO));
|
|
||||||
newtree->Branch("bgo_t", bgo_t, Form("BGO_timestamp[%d]/l", NBGO));
|
|
||||||
|
|
||||||
newtree->Branch("other", other, Form("other_e[%d]/D", NOTHER));
|
|
||||||
|
|
||||||
newtree->Branch("multi", &multi, "multiplicity_crystal/I");
|
|
||||||
|
|
||||||
ClearTreeData();
|
|
||||||
|
|
||||||
printf("================== Start processing....\n");
|
|
||||||
Float_t Frac = 0.1; ///Progress bar
|
|
||||||
TStopwatch StpWatch;
|
|
||||||
StpWatch.Start();
|
|
||||||
eventID = 0;
|
|
||||||
|
|
||||||
for( Long64_t entry = 0; entry < totnumEntry; entry++){
|
|
||||||
|
|
||||||
|
|
||||||
/*********** Progress Bar ******************************************/
|
|
||||||
if (entry>totnumEntry*Frac-1) {
|
|
||||||
TString msg; msg.Form("%llu", totnumEntry/1000);
|
|
||||||
int len = msg.Sizeof();
|
|
||||||
printf(" %3.0f%% (%*llu/%llu k) processed in %6.1f sec | expect %6.1f sec\n",
|
|
||||||
Frac*100, len, entry/1000,totnumEntry/1000,StpWatch.RealTime(), StpWatch.RealTime()/Frac);
|
|
||||||
StpWatch.Start(kFALSE);
|
|
||||||
Frac+=0.1;
|
|
||||||
}
|
|
||||||
|
|
||||||
entry = index[entry];
|
|
||||||
|
|
||||||
b_ID->GetEntry(entry);
|
|
||||||
b_energy->GetEntry(entry);
|
|
||||||
b_energy_timestamp->GetEntry(entry);
|
|
||||||
|
|
||||||
if( time0 == 0) time0 = energy_t;
|
|
||||||
timeDiff = (int) (energy_t - time0);
|
|
||||||
|
|
||||||
if( timeDiff < timeWindow ) {
|
|
||||||
|
|
||||||
if ( detID < NCRYSTAL ){
|
|
||||||
e[detID] = energy;
|
|
||||||
e_t[detID] = energy_t;
|
|
||||||
multi++;
|
|
||||||
}
|
|
||||||
if ( 100 <= detID && detID < 100 + NBGO ){
|
|
||||||
bgo[detID-100] = energy;
|
|
||||||
bgo_t[detID-100] = energy_t;
|
|
||||||
}
|
|
||||||
if ( 200 <= detID && detID < 200 + NOTHER){
|
|
||||||
other[detID-200] = energy;
|
|
||||||
}
|
|
||||||
|
|
||||||
//printf("%d | %3d %6d %10llu, %3d\n", multi, detID, energy, energy_t, timeDiff);
|
|
||||||
|
|
||||||
}else{
|
|
||||||
//---- end of event
|
|
||||||
eventID ++;
|
|
||||||
|
|
||||||
saveFile->cd();
|
|
||||||
newtree->Fill();
|
|
||||||
|
|
||||||
ClearTreeData();
|
|
||||||
|
|
||||||
/// fill 1st data of an event
|
|
||||||
time0 = energy_t;
|
|
||||||
timeDiff = 0;
|
|
||||||
|
|
||||||
if ( detID < NCRYSTAL ){
|
|
||||||
e[detID] = energy;
|
|
||||||
e_t[detID] = energy_t;
|
|
||||||
multi = 1;
|
|
||||||
}
|
|
||||||
if ( 100 <= detID && detID < 100 + NBGO ){
|
|
||||||
bgo[detID-100] = energy;
|
|
||||||
bgo_t[detID-100] = energy_t;
|
|
||||||
}
|
|
||||||
if ( 200 <= detID && detID < 200 + NOTHER){
|
|
||||||
other[detID-200] = energy;
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
printf("============================== finished.\n");
|
|
||||||
|
|
||||||
saveFile->cd();
|
|
||||||
newtree->Write();
|
|
||||||
saveFile->Close();
|
|
||||||
|
|
||||||
printf(" total number of event Built : %d \n", eventID);
|
|
||||||
|
|
||||||
}
|
|
|
@ -1,132 +0,0 @@
|
||||||
#include <stdio.h>
|
|
||||||
#include <iostream>
|
|
||||||
#include <fstream>
|
|
||||||
#include <stdlib.h>
|
|
||||||
#include <string.h>
|
|
||||||
#include "TFile.h"
|
|
||||||
#include "TTree.h"
|
|
||||||
#include "TString.h"
|
|
||||||
#include "TMath.h"
|
|
||||||
#include "TBenchmark.h"
|
|
||||||
#include <vector>
|
|
||||||
|
|
||||||
#define MAX_CRATES 2
|
|
||||||
#define MAX_BOARDS_PER_CRATE 13
|
|
||||||
#define MAX_CHANNELS_PER_BOARD 16
|
|
||||||
#define BOARD_START 2
|
|
||||||
|
|
||||||
#include "../mapping.h"
|
|
||||||
#include "../armory/DataBlock.h"
|
|
||||||
#include "../armory/evtReader.h"
|
|
||||||
|
|
||||||
//#############################################
|
|
||||||
// main
|
|
||||||
//#############################################
|
|
||||||
int main(int argn, char **argv) {
|
|
||||||
|
|
||||||
printf("=====================================\n");
|
|
||||||
printf("=== evt --> _raw.root ===\n");
|
|
||||||
printf("=====================================\n");
|
|
||||||
|
|
||||||
if (argn < 3 ) {
|
|
||||||
printf("Usage :\n");
|
|
||||||
printf("%s [outFile] [evt1] [evt2] [evt3] ..... \n", argv[0]);
|
|
||||||
printf("e.g.: \n");
|
|
||||||
printf("%s hahaha_raw.root haha-000.evt haha-001.evt haha-002.evt\n", argv[0]);
|
|
||||||
printf("%s hahaha_raw.root `ls haha-*.evt`\n", argv[0]);
|
|
||||||
return 1;
|
|
||||||
}
|
|
||||||
|
|
||||||
TString outFileName = argv[1];
|
|
||||||
int nFiles = argn-2;
|
|
||||||
TString inFileName[nFiles];
|
|
||||||
for( int i = 0; i < nFiles ; i++){
|
|
||||||
inFileName[i] = argv[i+2];
|
|
||||||
printf(" in file - %2d: %s\n", i, inFileName[i].Data());
|
|
||||||
}
|
|
||||||
|
|
||||||
printf(" out file: %s\n", outFileName.Data());
|
|
||||||
|
|
||||||
|
|
||||||
evtReader * evt = new evtReader();
|
|
||||||
DataBlock * data = evt->data;
|
|
||||||
short detID;
|
|
||||||
printf("====================================\n");
|
|
||||||
|
|
||||||
//====== ROOT file
|
|
||||||
TFile * outFile = new TFile(outFileName, "recreate");
|
|
||||||
TTree * tree = new TTree("tree", "tree");
|
|
||||||
|
|
||||||
tree->Branch("evID", &data->eventID, "data_ID/L");
|
|
||||||
tree->Branch("detID", &detID, "detID/s");
|
|
||||||
tree->Branch("e", &data->energy, "crystal_energy/s");
|
|
||||||
tree->Branch("e_t", &data->time, "crystal_timestamp/l");
|
|
||||||
tree->Branch("p", &data->pileup, "pileup/O");
|
|
||||||
tree->Branch("trace_length", &data->trace_length, "trace_length/s");
|
|
||||||
tree->Branch("trace", data->trace, "trace[trace_length]/s");
|
|
||||||
|
|
||||||
TBenchmark gClock;
|
|
||||||
gClock.Reset();
|
|
||||||
gClock.Start("timer");
|
|
||||||
|
|
||||||
//=========================================
|
|
||||||
//=========================================
|
|
||||||
//=========================================
|
|
||||||
//=========================================
|
|
||||||
for( int i = 0; i < nFiles; i++){
|
|
||||||
|
|
||||||
evt->OpenFile(inFileName[i]);
|
|
||||||
if( evt->IsOpen() == false ) continue;
|
|
||||||
|
|
||||||
Long64_t measureCount = 0;
|
|
||||||
printf("\033[1;31mProcessing file: %s\033[0m\n", inFileName[i].Data());
|
|
||||||
TBenchmark clock2;
|
|
||||||
clock2.Reset();
|
|
||||||
clock2.Start("timer");
|
|
||||||
|
|
||||||
evt->ScanNumberOfBlock();
|
|
||||||
|
|
||||||
//=============== Read File
|
|
||||||
while( evt->IsEndOfFile() == false ){
|
|
||||||
|
|
||||||
evt->ReadBlock();
|
|
||||||
//evt->PrintStatus(10000);
|
|
||||||
|
|
||||||
int id = data->crate*MAX_BOARDS_PER_CRATE*MAX_CHANNELS_PER_BOARD + (data->slot-BOARD_START)*MAX_CHANNELS_PER_BOARD + data->ch;
|
|
||||||
detID = mapping[id];
|
|
||||||
|
|
||||||
//cern fill tree
|
|
||||||
outFile->cd();
|
|
||||||
tree->Fill();
|
|
||||||
}
|
|
||||||
|
|
||||||
clock2.Stop("timer");
|
|
||||||
double time = clock2.GetRealTime("timer");
|
|
||||||
float tempf = (float)evt->GetFilePos()/(1024.*1024.*1024.);
|
|
||||||
printf(" measurements: \x1B[32m%lld \x1B[0m | %.3f GB\n", evt->GetBlockID(), tempf);
|
|
||||||
printf(" Time used:%3.0f min %5.2f sec\n", TMath::Floor(time/60.), time - TMath::Floor(time/60.)*60.);
|
|
||||||
printf(" Root file size so far: %.4f GB\n", outFile->GetSize()/1024./1024./1024.);
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
gClock.Stop("timer");
|
|
||||||
double time = gClock.GetRealTime("timer");
|
|
||||||
gClock.Start("timer");
|
|
||||||
float tempf = (float)evt->GetFilePos()/(1024.*1024.*1024.);
|
|
||||||
printf("Total measurements: \x1B[32m%lld \x1B[0m\nPercent Complete: \x1B[32m%ld%% of %.3f GB\x1B[0m\nTime used:%3.0f min %5.2f sec\033[A\r",
|
|
||||||
evt->GetBlockID()+1, (100*evt->GetFilePos()/evt->GetFileSize()), tempf, TMath::Floor(time/60.), time - TMath::Floor(time/60.)*60.);
|
|
||||||
|
|
||||||
|
|
||||||
//cern save root
|
|
||||||
outFile->cd();
|
|
||||||
double totRootSize = outFile->GetSize()/1024./1024./1024.;
|
|
||||||
tree->Write();
|
|
||||||
outFile->Close();
|
|
||||||
|
|
||||||
gClock.Stop("timer");
|
|
||||||
time = gClock.GetRealTime("timer");
|
|
||||||
printf("\n==================== finished.\r\n");
|
|
||||||
printf("Total time spend : %3.0f min %5.2f sec\n", TMath::Floor(time/60.), time - TMath::Floor(time/60.)*60.);
|
|
||||||
printf(" File size of %s : %.3f GB \n", outFileName.Data(), totRootSize);
|
|
||||||
|
|
||||||
}
|
|
File diff suppressed because it is too large
Load Diff
|
@ -17,6 +17,24 @@
|
||||||
#define MAX_CHANNELS_PER_BOARD 16
|
#define MAX_CHANNELS_PER_BOARD 16
|
||||||
#define BOARD_START 2
|
#define BOARD_START 2
|
||||||
|
|
||||||
|
|
||||||
|
class timePos{
|
||||||
|
public:
|
||||||
|
timePos(ULong64_t time, unsigned long int inFilePos){
|
||||||
|
this->time = time;
|
||||||
|
this->inFilePos = inFilePos;
|
||||||
|
}
|
||||||
|
|
||||||
|
ULong64_t time;
|
||||||
|
unsigned long int inFilePos;
|
||||||
|
|
||||||
|
void Print(){
|
||||||
|
printf("time: %16llu, filePos: %lu\n", time, inFilePos);
|
||||||
|
}
|
||||||
|
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
class evtReader{
|
class evtReader{
|
||||||
|
|
||||||
public:
|
public:
|
||||||
|
@ -26,6 +44,7 @@ class evtReader{
|
||||||
FILE * inFile;
|
FILE * inFile;
|
||||||
|
|
||||||
long int inFileSize;
|
long int inFileSize;
|
||||||
|
long int inFilePos0;
|
||||||
long int inFilePos;
|
long int inFilePos;
|
||||||
bool endOfFile;
|
bool endOfFile;
|
||||||
bool isOpened;
|
bool isOpened;
|
||||||
|
@ -40,8 +59,6 @@ class evtReader{
|
||||||
long int inFilePosPrecent[10];
|
long int inFilePosPrecent[10];
|
||||||
Long64_t blockIDPrecent[10];
|
Long64_t blockIDPrecent[10];
|
||||||
|
|
||||||
std::vector<DataBlock> dataList;
|
|
||||||
|
|
||||||
///============================================ Methods
|
///============================================ Methods
|
||||||
public:
|
public:
|
||||||
|
|
||||||
|
@ -65,11 +82,17 @@ class evtReader{
|
||||||
int ReadBlock(int opt = 0); /// 0 = default, fill data
|
int ReadBlock(int opt = 0); /// 0 = default, fill data
|
||||||
/// 1 = no fill data
|
/// 1 = no fill data
|
||||||
|
|
||||||
|
int ReadBlockAtPos(unsigned long int filePos);
|
||||||
|
|
||||||
void ScanNumberOfBlock();
|
void ScanNumberOfBlock();
|
||||||
void JumptoPrecent(int precent); ///this is offset by 1 block
|
void JumptoPrecent(int precent); ///this is offset by 1 block
|
||||||
void PrintStatus(int mod);
|
void PrintStatus(int mod);
|
||||||
|
|
||||||
std::vector<DataBlock> ReadBatchDataAndSort(long numData);
|
|
||||||
|
std::vector<timePos> timePosList;
|
||||||
|
unsigned long int filePosK;
|
||||||
|
std::vector<timePos> ReadBatchPos(long batchSize, bool verbose = false);
|
||||||
|
void SortTimePos();
|
||||||
|
|
||||||
};
|
};
|
||||||
|
|
||||||
|
@ -82,6 +105,8 @@ evtReader::evtReader(){
|
||||||
|
|
||||||
inFileSize = 0;
|
inFileSize = 0;
|
||||||
inFilePos = 0;
|
inFilePos = 0;
|
||||||
|
inFilePos0 = 0;
|
||||||
|
filePosK = 0;
|
||||||
|
|
||||||
nBlock = 0;
|
nBlock = 0;
|
||||||
blockID = -1;
|
blockID = -1;
|
||||||
|
@ -92,8 +117,7 @@ evtReader::evtReader(){
|
||||||
|
|
||||||
|
|
||||||
evtReader::~evtReader(){
|
evtReader::~evtReader(){
|
||||||
fclose(inFile);
|
fclose(inFile); //already delete inFile
|
||||||
delete inFile;
|
|
||||||
delete data;
|
delete data;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
@ -104,6 +128,8 @@ evtReader::evtReader(TString inFileName){
|
||||||
|
|
||||||
inFileSize = 0;
|
inFileSize = 0;
|
||||||
inFilePos = 0;
|
inFilePos = 0;
|
||||||
|
inFilePos0 = 0;
|
||||||
|
filePosK = 0;
|
||||||
|
|
||||||
nBlock = 0;
|
nBlock = 0;
|
||||||
blockID = -1;
|
blockID = -1;
|
||||||
|
@ -154,6 +180,13 @@ bool evtReader::IsEndOfFile() {
|
||||||
return haha > 0 ? true: false;
|
return haha > 0 ? true: false;
|
||||||
}
|
}
|
||||||
|
|
||||||
|
int evtReader::ReadBlockAtPos(unsigned long int filePos){
|
||||||
|
|
||||||
|
fseek( inFile, filePos, SEEK_SET);
|
||||||
|
|
||||||
|
return ReadBlock(0);
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
int evtReader::ReadBlock(int opt){
|
int evtReader::ReadBlock(int opt){
|
||||||
|
|
||||||
|
@ -162,6 +195,8 @@ int evtReader::ReadBlock(int opt){
|
||||||
|
|
||||||
unsigned int header[4]; ///read 4 header, unsigned int = 4 byte = 32 bits.
|
unsigned int header[4]; ///read 4 header, unsigned int = 4 byte = 32 bits.
|
||||||
|
|
||||||
|
inFilePos0 = inFilePos;
|
||||||
|
|
||||||
if ( fread(header, sizeof(header), 1, inFile) != 1 ) {
|
if ( fread(header, sizeof(header), 1, inFile) != 1 ) {
|
||||||
endOfFile = true;
|
endOfFile = true;
|
||||||
return -1;
|
return -1;
|
||||||
|
@ -277,6 +312,8 @@ void evtReader::ScanNumberOfBlock(){
|
||||||
printf("scan complete: number of data Block : %ld\n", nBlock);
|
printf("scan complete: number of data Block : %ld\n", nBlock);
|
||||||
|
|
||||||
inFilePos = 0;
|
inFilePos = 0;
|
||||||
|
inFilePos0 = 0;
|
||||||
|
filePosK = 0;
|
||||||
blockID = -1;
|
blockID = -1;
|
||||||
|
|
||||||
rewind(inFile); ///back to the File begining
|
rewind(inFile); ///back to the File begining
|
||||||
|
@ -310,23 +347,141 @@ void evtReader::PrintStatus(int mod){
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
std::vector<DataBlock> evtReader::ReadBatchDataAndSort(long numData){
|
void evtReader::SortTimePos(){
|
||||||
|
std::sort(timePosList.begin(), timePosList.end(), [](const timePos & a, const timePos & b) { return a.time < b.time; });
|
||||||
std::vector<DataBlock> dataList_A;
|
|
||||||
if( endOfFile ){
|
|
||||||
return dataList_A;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
dataList.clear();
|
std::vector<timePos> evtReader::ReadBatchPos(long batchSize, bool verbose){
|
||||||
|
|
||||||
for( long long k = 0; k < std::min(numData, nBlock); k++){
|
if( verbose ) printf("&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&& %s / %lu / %lu\n", __func__, filePosK, inFileSize );
|
||||||
ReadBlock();
|
|
||||||
dataList.push_back(*data);
|
fseek( inFile, filePosK, SEEK_SET);
|
||||||
|
|
||||||
|
std::vector<timePos> timePosList_A;
|
||||||
|
if( filePosK == inFileSize ){
|
||||||
|
timePosList_A = timePosList;
|
||||||
|
timePosList.clear();
|
||||||
|
return timePosList_A;
|
||||||
}
|
}
|
||||||
|
|
||||||
//sort the dataList
|
if( timePosList.size() == 0 ){
|
||||||
std::sort(dataList.begin(), dataList.end(), [](const DataBlock & a, const DataBlock & b) { return a.time < b.time; });
|
int res = 0;
|
||||||
|
do{
|
||||||
|
res = ReadBlock();
|
||||||
|
timePosList.push_back( timePos(data->time, inFilePos0));
|
||||||
|
}while( timePosList.size() < batchSize && res == 1);
|
||||||
|
SortTimePos();
|
||||||
|
unsigned long long t0_B = timePosList.front().time;
|
||||||
|
unsigned long long t1_B = timePosList.back().time;
|
||||||
|
if( verbose ) {
|
||||||
|
printf(" hit in memeory : %7zu | %lu | %lu \n", timePosList.size(), inFilePos, inFileSize);
|
||||||
|
printf("t0 : %15llu\n", t0_B);
|
||||||
|
printf("t1 : %15llu\n", t1_B);
|
||||||
|
}
|
||||||
|
timePosList_A = timePosList;
|
||||||
|
timePosList.clear();
|
||||||
|
|
||||||
|
}else{
|
||||||
|
timePosList_A = timePosList;
|
||||||
|
timePosList.clear();
|
||||||
|
}
|
||||||
|
|
||||||
|
if( feof(inFile) ) return timePosList_A;
|
||||||
|
|
||||||
|
int res = 0;
|
||||||
|
do{
|
||||||
|
res = ReadBlock();
|
||||||
|
timePosList.push_back(timePos(data->time, inFilePos0));
|
||||||
|
}while( timePosList.size() < batchSize && res == 1);
|
||||||
|
SortTimePos();
|
||||||
|
unsigned long long t0_B = timePosList.front().time;
|
||||||
|
unsigned long long t1_B = timePosList.back().time;
|
||||||
|
if( verbose ) {
|
||||||
|
printf(" hit in memeory : %7zu | %lu | %lu \n", timePosList.size(), inFilePos, inFileSize);
|
||||||
|
printf("t0 : %15llu\n", t0_B);
|
||||||
|
printf("t1 : %15llu\n", t1_B);
|
||||||
|
}
|
||||||
|
|
||||||
|
unsigned long long t0_A = timePosList_A.front().time;
|
||||||
|
unsigned long long t1_A = timePosList_A.back().time;
|
||||||
|
ulong ID_A = 0;
|
||||||
|
ulong ID_B = 0;
|
||||||
|
|
||||||
|
if( t0_A >= t0_B) {
|
||||||
|
printf("\033[0;31m!!!!!!!!!!!!!!!!! %s | Need to increase the batch size. \033[0m\n", __func__);
|
||||||
|
printf("present batch size : %lu \n", batchSize);
|
||||||
|
printf("timePosList_A t0_A : %15llu\n", t0_A);
|
||||||
|
printf("timePosList t0_B : %15llu\n", t0_B);
|
||||||
|
return std::vector<timePos> ();
|
||||||
|
}
|
||||||
|
|
||||||
|
if( t1_A > t0_B) { // need to sort between two hitList
|
||||||
|
|
||||||
|
if( verbose ) {
|
||||||
|
printf("############# need to sort \n");
|
||||||
|
printf("=========== sume of A + B : %zu \n", timePosList_A.size() + timePosList.size());
|
||||||
|
}
|
||||||
|
|
||||||
|
std::vector<timePos> timePosListTemp;
|
||||||
|
|
||||||
|
// find the hit that is >= t0_B, save them to timePosListTemp
|
||||||
|
for( size_t j = 0; j < timePosList_A.size() ; j++){
|
||||||
|
if( timePosList_A[j].time < t0_B ) continue;;
|
||||||
|
if( ID_A == 0 ) ID_A = j;
|
||||||
|
timePosListTemp.push_back(timePosList_A[j]);
|
||||||
|
}
|
||||||
|
|
||||||
|
// remove timePosList_A element that is >= t0_B
|
||||||
|
timePosList_A.erase(timePosList_A.begin() + ID_A, timePosList_A.end() );
|
||||||
|
|
||||||
|
// find the hit that is <= t1_A, save them to timePosListTemp
|
||||||
|
for( size_t j = 0; j < timePosList.size(); j++){
|
||||||
|
if( timePosList[j].time > t1_A ) {
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
timePosListTemp.push_back(timePosList[j]);
|
||||||
|
ID_B = j + 1;
|
||||||
|
}
|
||||||
|
|
||||||
|
// remove hit elements that is <= t1_A
|
||||||
|
timePosList.erase(timePosList.begin(), timePosList.begin() + ID_B );
|
||||||
|
|
||||||
|
// sort timePosListTemp
|
||||||
|
std::sort(timePosListTemp.begin(), timePosListTemp.end(), [](const timePos& a, const timePos& b) {
|
||||||
|
return a.time < b.time;
|
||||||
|
});
|
||||||
|
|
||||||
|
|
||||||
|
if( verbose ) {
|
||||||
|
printf("----------------- ID_A : %lu, Drop\n", ID_A);
|
||||||
|
printf("----------------- ID_B : %lu, Drop\n", ID_B);
|
||||||
|
printf("=========== sume of A + B + Temp : %zu \n", timePosList_A.size() + timePosList.size() + timePosListTemp.size());
|
||||||
|
printf("----------------- refill timePosList_A \n");
|
||||||
|
}
|
||||||
|
|
||||||
|
for( size_t j = 0; j < timePosListTemp.size(); j++){
|
||||||
|
timePosList_A.push_back(timePosListTemp[j]);
|
||||||
|
}
|
||||||
|
timePosListTemp.clear();
|
||||||
|
|
||||||
|
if( verbose ) {
|
||||||
|
printf("=========== sume of A + B : %zu \n", timePosList_A.size() + timePosList.size());
|
||||||
|
printf(" A in memeory : %7zu \n", timePosList_A.size());
|
||||||
|
printf("t0 : %15llu\n", timePosList_A.front().time);
|
||||||
|
printf("t1 : %15llu\n", timePosList_A.back().time);
|
||||||
|
|
||||||
|
printf(" B in memeory : %7zu | %lu | %lu \n", timePosList.size(), inFilePos, inFileSize);
|
||||||
|
printf("t0 : %15llu\n", timePosList.front().time);
|
||||||
|
printf("t1 : %15llu\n", timePosList.back().time);
|
||||||
|
}
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
filePosK = inFilePos;
|
||||||
|
|
||||||
|
return timePosList_A;
|
||||||
|
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
#endif
|
#endif
|
||||||
|
|
|
@ -1,11 +1,11 @@
|
||||||
CC=g++
|
CC=g++
|
||||||
|
|
||||||
#all: to2root evt2hist MergeEVT ev22txt EventBuilder pxi-time-order
|
#all: to2root evt2hist MergeEVT ev22txt EventBuilder pxi-time-order
|
||||||
all: to2root evt2hist MergeEVT ev22txt EventBuilder pxi-fsu-time-order
|
all: to2root evt2hist ev22txt EventBuilder pxi-fsu-time-order
|
||||||
|
|
||||||
#this is FSU evt to root
|
#this is FSU evt to root
|
||||||
xia2root: ../armory/xia2root.cpp
|
# xia2root: ../armory/xia2root.cpp
|
||||||
$(CC) ../armory/xia2root.cpp -o xia2root `root-config --cflags --glibs`
|
# $(CC) ../armory/xia2root.cpp -o xia2root `root-config --cflags --glibs`
|
||||||
|
|
||||||
#xia2ev2_nopart: armory/xia2ev2_nopart.cpp
|
#xia2ev2_nopart: armory/xia2ev2_nopart.cpp
|
||||||
# $(CC) armory/xia2ev2_nopart.cpp -o xia2ev2_nopart
|
# $(CC) armory/xia2ev2_nopart.cpp -o xia2ev2_nopart
|
||||||
|
@ -15,8 +15,8 @@ to2root: ../armory/to2root.cpp ../armory/DataBlock.h ../armory/evtReader.h ../ma
|
||||||
$(CC) ../armory/to2root.cpp -o to2root `root-config --cflags --glibs`
|
$(CC) ../armory/to2root.cpp -o to2root `root-config --cflags --glibs`
|
||||||
|
|
||||||
#this is for online root
|
#this is for online root
|
||||||
MergeEVT: ../armory/MergeEVT.cpp ../armory/DataBlock.h ../armory/evtReader.h ../mapping.h
|
# MergeEVT: ../armory/MergeEVT.cpp ../armory/DataBlock.h ../armory/evtReader.h ../mapping.h
|
||||||
$(CC) ../armory/MergeEVT.cpp -o MergeEVT `root-config --cflags --glibs`
|
# $(CC) ../armory/MergeEVT.cpp -o MergeEVT `root-config --cflags --glibs`
|
||||||
|
|
||||||
#this is for online spectrums
|
#this is for online spectrums
|
||||||
evt2hist: ../armory/evt2hist.cpp ../armory/DataBlock.h ../armory/evtReader.h ../mapping.h
|
evt2hist: ../armory/evt2hist.cpp ../armory/DataBlock.h ../armory/evtReader.h ../mapping.h
|
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@ -1,431 +0,0 @@
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/*********************************************************/
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|
||||||
/* PXI Time Order -- J.M. Allmond (ORNL) -- v1 Jul 2016 */
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|
||||||
/* -- v2 Feb 2018 */
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|
||||||
/* -- v3 Jun 2018 */
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|
||||||
/* -- v4 May 2019 */
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|
||||||
/* */
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|
||||||
/* !Time Order Events from Pixie-16 digitizers */
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|
||||||
/* !Max of: */
|
|
||||||
/* !IDs = static, Evts = dynamic, data = dynamic */
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|
||||||
/* */
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|
||||||
/* gcc -o pxi-time-order pxi-time-order.c */
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|
||||||
/* ./pxi-time-order datafile */
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|
||||||
/*********************************************************/
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|
||||||
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|
||||||
/////////////////////////////////////////////////////////
|
|
||||||
//Code assumes that sequential sub events for a //
|
|
||||||
//specific channel are time ordered; therefore, //
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|
||||||
//unmerge data into circular buffers on a per //
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|
||||||
//channel id basis and then remerge channels in //
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|
||||||
//time order. //
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|
||||||
/////////////////////////////////////////////////////////
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|
||||||
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|
||||||
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|
||||||
#include <stdio.h>
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|
||||||
#include <stdlib.h>
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|
||||||
#include <string.h>
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|
||||||
#include <unistd.h>
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|
||||||
#include <time.h>
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|
||||||
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|
||||||
#define MAX_CRATES 2
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|
||||||
#define MAX_BOARDS_PER_CRATE 13
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|
||||||
#define MAX_CHANNELS_PER_BOARD 16
|
|
||||||
#define BOARD_START 2
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|
||||||
|
|
||||||
#define MAX_ID MAX_CRATES*MAX_BOARDS_PER_CRATE*MAX_CHANNELS_PER_BOARD
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|
||||||
|
|
||||||
#define HEADER_LENGTH 4 //unit = words with 4 bytes per word
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|
||||||
#define MAX_SUB_LENGTH 2016 //unit = words with 4 bytes per word ; 2016 --> 40 micro-second trace + 4 word header + 12 extra header
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|
||||||
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|
||||||
|
|
||||||
#define DEF_SUB_EVENTS 100 //number of events for each dynamic buffer level
|
|
||||||
#define M1_SUB_EVENTS 1000 //manual input for irregular / non-linear / non-geometric progression
|
|
||||||
#define M2_SUB_EVENTS 5000
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|
||||||
#define M3_SUB_EVENTS 20000
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|
||||||
#define M4_SUB_EVENTS 50000
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|
||||||
#define M5_SUB_EVENTS 100000
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|
||||||
#define MAX_SUB_EVENTS 200000
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|
||||||
|
|
||||||
#define MAX_MALLOC 4000*1024*1024L //2GB
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|
||||||
|
|
||||||
struct subevent
|
|
||||||
{
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|
||||||
long long int timestamp;
|
|
||||||
int length; //unit = words with 4 bytes per word
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|
||||||
unsigned int *data;
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|
||||||
};
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|
||||||
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|
||||||
struct subevent *subevents[MAX_ID];
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|
||||||
int nevts[MAX_ID], iptr[MAX_ID];
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|
||||||
int maxevts[MAX_ID];
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|
||||||
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|
||||||
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|
||||||
int main(int argc, char **argv) {
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|
||||||
|
|
||||||
FILE *fpr, *fpw;
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|
||||||
long int fprsize=0, fprsize_orig=0, fprsize_old=-1, fprpos=0;
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|
||||||
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|
||||||
int online = 0;
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|
||||||
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|
||||||
unsigned int subhead[HEADER_LENGTH];
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|
||||||
memset(subhead, 0, sizeof(subhead));
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|
||||||
int pause=0;
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|
||||||
|
|
||||||
long long int nwords=0, evts_tot_read=0, evts_tot_write=0;
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|
||||||
|
|
||||||
long long int time=0,time_old=0;
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|
||||||
int length=0;
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|
||||||
int chn=0;
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|
||||||
int sln=0;
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|
||||||
int crn=0;
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|
||||||
int id=0;
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|
||||||
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|
||||||
int idmax=0;
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|
||||||
int totmem=0;
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|
||||||
int outoforder=0;
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|
||||||
int evts_old=0;
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|
||||||
int evts_new=0;
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|
||||||
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|
||||||
long long int timemin=0, timemin_old=0;
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|
||||||
int min_id = -1;
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|
||||||
|
|
||||||
memset(nevts, 0, sizeof(nevts));
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|
||||||
memset(iptr, 0, sizeof(iptr));
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|
||||||
|
|
||||||
int i=0, j=0;
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|
||||||
div_t e_div;
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|
||||||
|
|
||||||
|
|
||||||
//open input event file
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|
||||||
if ((fpr = fopen(argv[1], "r")) == NULL) {
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|
||||||
fprintf(stderr, "Error, cannot open input file %s\n", argv[1]);
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|
||||||
return 1;
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|
||||||
}
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|
||||||
|
|
||||||
//write time order file to current location, not location of event file
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|
||||||
char filenameto[80];
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|
||||||
char *filename = strrchr(argv[1], '/');
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|
||||||
if (filename == NULL) strcpy(filenameto,argv[1]);
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|
||||||
else strcpy(filenameto,filename+1);
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|
||||||
strcat(filenameto,".to");
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|
||||||
if ((fpw = fopen(filenameto, "w")) == NULL) {
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|
||||||
fprintf(stderr, "Error, cannot open output file %s\n", filenameto);
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|
||||||
return 1;
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|
||||||
}
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|
||||||
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|
||||||
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|
||||||
//check for lockfile, active PID, and event file for auto "online" mode detection
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|
||||||
FILE *FPLOCK;
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|
||||||
char lockfile[1024];
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|
||||||
strcpy(lockfile, getenv("HOME"));
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|
||||||
strcat(lockfile, "/.Pixie16Lock");
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|
||||||
int lockpid;
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|
||||||
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|
||||||
FILE *FPPATH;
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|
||||||
char pathfile[1024];
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|
||||||
char line[1024];
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|
||||||
char onlinefile[1024];
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|
||||||
strcpy(pathfile, getenv("HOME"));
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|
||||||
strcat(pathfile, "/.Pixie16Path");
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|
||||||
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|
||||||
FPLOCK = fopen(lockfile, "r");
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|
||||||
if (FPLOCK != NULL) {
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|
||||||
fscanf(FPLOCK, "%d", &lockpid);
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|
||||||
fclose(FPLOCK);
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|
||||||
//PID from lockfile matches a running PID; run timesort in "online" mode for now
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|
||||||
if (getpgid(lockpid) >= 0) {
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|
||||||
FPPATH = fopen(pathfile, "r");
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|
||||||
if (FPPATH == NULL) {
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|
||||||
online = 0;
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|
||||||
}
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|
||||||
else {
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|
||||||
fgets(line, 1024, FPPATH); //skip first line
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|
||||||
fgets(line, 1024, FPPATH); //need second line
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|
||||||
sscanf(line,"%s\n", onlinefile);
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|
||||||
fclose(FPPATH);
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|
||||||
if (filename == NULL) {
|
|
||||||
if (strcmp(onlinefile,argv[1]) == 0) {
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|
||||||
online = 1;
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|
||||||
}
|
|
||||||
}
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|
||||||
else {
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|
||||||
if (strcmp(onlinefile,filename+1) == 0) {
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|
||||||
online = 1;
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|
||||||
}
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|
||||||
}
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|
||||||
}
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|
||||||
}
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|
||||||
}
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|
||||||
if (online == 1) printf("Auto Mode: \x1B[32mOnline\x1B[0m\n");
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|
||||||
else printf("Auto Mode: \x1B[32mOffline\x1B[0m\n");
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|
||||||
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|
||||||
//check file size for auto "online" mode
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|
||||||
fprpos = ftell(fpr);
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|
||||||
fseek(fpr, 0L, SEEK_END);
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|
||||||
fprsize = fprsize_orig = ftell(fpr);
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|
||||||
fseek(fpr, fprpos, SEEK_SET);
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|
||||||
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|
||||||
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|
||||||
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|
||||||
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|
||||||
//Get memory for default number of subevents per channel id
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|
||||||
for (i=0; i<MAX_ID; i++){
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|
||||||
subevents[i] = (struct subevent *) malloc(sizeof(struct subevent)*DEF_SUB_EVENTS);
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|
||||||
if (subevents[i] == NULL) {
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|
||||||
printf("malloc failed\n");
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|
||||||
return -1;
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|
||||||
}
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|
||||||
totmem += sizeof(struct subevent)*DEF_SUB_EVENTS;
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|
||||||
maxevts[i] = DEF_SUB_EVENTS;
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|
||||||
for (j=0; j<DEF_SUB_EVENTS; j++) {
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|
||||||
subevents[i][j].data = NULL;
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|
||||||
subevents[i][j].length = 0;
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|
||||||
subevents[i][j].timestamp = 0;
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|
||||||
}
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|
||||||
}
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|
||||||
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|
||||||
printf("Static Memory = %ld KB (cf. MAX_ID=%d)\n", sizeof(subevents)/1024, MAX_ID);
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|
||||||
while (1) { //main while loop
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|
||||||
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|
||||||
/////////
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|
||||||
while (1) { //fill buffers until (A) maxevents or (maxevents and 2GB) is reached for any ID
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|
||||||
//(B) EOF
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|
||||||
//(C) auto online mode will wait for updates and break out of fill buffers for narrow time window
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|
||||||
//read 4-byte header
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|
||||||
if (pause == 1) {
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|
||||||
pause = 0;
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|
||||||
}
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|
||||||
else {
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|
||||||
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|
||||||
//////////////
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|
||||||
//auto online
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|
||||||
while ( (fprsize - nwords*sizeof(int) < MAX_SUB_LENGTH*sizeof(int)) && online == 1) {
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|
||||||
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|
||||||
online = 0;
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|
||||||
usleep(100000); //wait 0.1 seconds before checking (prevents excessive cpu usage)
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|
||||||
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|
||||||
//check new file size
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|
||||||
fprpos = ftell(fpr);
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|
||||||
fseek(fpr, 0L, SEEK_END);
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|
||||||
fprsize = ftell(fpr);
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|
||||||
fseek(fpr, fprpos, SEEK_SET);
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|
||||||
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|
||||||
//check for lock file and active PID
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|
||||||
FPLOCK = fopen(lockfile, "r");
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|
||||||
if (FPLOCK != NULL) {
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|
||||||
fscanf(FPLOCK, "%d", &lockpid);
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|
||||||
fclose(FPLOCK);
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|
||||||
if (getpgid(lockpid) >= 0) {
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|
||||||
FPPATH = fopen(pathfile, "r");
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|
||||||
if (FPPATH != NULL) {
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|
||||||
fgets(line, 1024, FPPATH); //skip first line
|
|
||||||
fgets(line, 1024, FPPATH); //need second line
|
|
||||||
sscanf(line,"%s\n", onlinefile);
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|
||||||
fclose(FPPATH);
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|
||||||
if (filename == NULL) {
|
|
||||||
if (strcmp(onlinefile,argv[1]) == 0) online = 1;
|
|
||||||
}
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|
||||||
else {
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|
||||||
if (strcmp(onlinefile,filename+1) == 0) online = 1;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
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|
||||||
}
|
|
||||||
} //end auto online
|
|
||||||
|
|
||||||
|
|
||||||
//read 4-byte header
|
|
||||||
if (fread(subhead, sizeof(subhead), 1, fpr) != 1) break;
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|
||||||
nwords = nwords + HEADER_LENGTH;
|
|
||||||
chn = subhead[0] & 0xF;
|
|
||||||
sln = (subhead[0] & 0xF0) >> 4;
|
|
||||||
crn = (subhead[0] & 0xF00) >> 8;
|
|
||||||
id = crn*MAX_BOARDS_PER_CRATE*MAX_CHANNELS_PER_BOARD + (sln-BOARD_START)*MAX_CHANNELS_PER_BOARD + chn;
|
|
||||||
length = (subhead[0] & 0x7FFE0000) >> 17; //unit = words with 4 bytes per word
|
|
||||||
time = ( (long long int)(subhead[2] & 0xFFFF) << 32) + subhead[1];
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|
||||||
if (id > idmax) idmax = id;
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
//check memory
|
|
||||||
if (totmem > MAX_MALLOC) {printf("Error: Exceeded MAX_MALLOC"); return -1;}
|
|
||||||
|
|
||||||
//Expand memory for more events (careful when final is to left of initial in circular buffer)
|
|
||||||
if ( maxevts[id] - nevts[id] == 1 && totmem < MAX_MALLOC) {
|
|
||||||
|
|
||||||
if (maxevts[id] == DEF_SUB_EVENTS) {evts_old = DEF_SUB_EVENTS; evts_new = M1_SUB_EVENTS;}
|
|
||||||
if (maxevts[id] == M1_SUB_EVENTS) {evts_old = M1_SUB_EVENTS; evts_new = M2_SUB_EVENTS;}
|
|
||||||
if (maxevts[id] == M2_SUB_EVENTS) {evts_old = M2_SUB_EVENTS; evts_new = M3_SUB_EVENTS;}
|
|
||||||
if (maxevts[id] == M3_SUB_EVENTS) {evts_old = M3_SUB_EVENTS; evts_new = M4_SUB_EVENTS;}
|
|
||||||
if (maxevts[id] == M4_SUB_EVENTS) {evts_old = M4_SUB_EVENTS; evts_new = M5_SUB_EVENTS;}
|
|
||||||
if (maxevts[id] == M5_SUB_EVENTS) {evts_old = M5_SUB_EVENTS; evts_new = MAX_SUB_EVENTS;}
|
|
||||||
|
|
||||||
if (maxevts[id]==evts_old && totmem + (evts_new-evts_old)*(sizeof(struct subevent) + sizeof(unsigned int)*length) < MAX_MALLOC) {
|
|
||||||
subevents[id] = (struct subevent *) realloc(subevents[id], sizeof(struct subevent)*evts_new);
|
|
||||||
if (subevents[id] == NULL) {
|
|
||||||
printf("realloc failed\n");
|
|
||||||
return -1;
|
|
||||||
}
|
|
||||||
totmem = totmem - sizeof(struct subevent)*evts_old + sizeof(struct subevent)*evts_new;
|
|
||||||
maxevts[id] = evts_new;
|
|
||||||
for (j=evts_old; j<evts_new; j++) {
|
|
||||||
subevents[id][j].data = NULL;
|
|
||||||
subevents[id][j].length = 0;
|
|
||||||
subevents[id][j].timestamp = 0;
|
|
||||||
}
|
|
||||||
|
|
||||||
// if circular buffer is wrapped around (i.e., final is to left of intial, move data to right of initial)
|
|
||||||
if (iptr[id] + nevts[id] > evts_old) {
|
|
||||||
for (j=0; j<iptr[id] + nevts[id] - evts_old; j++) {
|
|
||||||
if (subevents[id][evts_old+j].data == NULL) {
|
|
||||||
subevents[id][evts_old+j].data = (unsigned int *) malloc(sizeof(unsigned int)*subevents[id][j].length);
|
|
||||||
if (subevents[id][evts_old+j].data == NULL) {
|
|
||||||
printf("malloc failed\n");
|
|
||||||
return -1;
|
|
||||||
}
|
|
||||||
totmem += sizeof(unsigned int)*subevents[id][j].length;
|
|
||||||
}
|
|
||||||
subevents[id][evts_old+j].length = subevents[id][j].length;
|
|
||||||
subevents[id][evts_old+j].timestamp = subevents[id][j].timestamp;
|
|
||||||
for (i=0; i<subevents[id][evts_old+j].length; i++) {
|
|
||||||
subevents[id][evts_old+j].data[i]=subevents[id][j].data[i];
|
|
||||||
}
|
|
||||||
//free data memory until it's needed again
|
|
||||||
free(subevents[id][j].data);
|
|
||||||
subevents[id][j].data = NULL;
|
|
||||||
totmem -= sizeof(unsigned int)*subevents[id][j].length;
|
|
||||||
subevents[id][j].length = 0;
|
|
||||||
subevents[id][j].timestamp = 0;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
// time control of buffer filling for auto online mode (reset if initial value or large gap > 3.5 sec)
|
|
||||||
// large gap could be from low rate or un/replug
|
|
||||||
if ( time_old == 0 || (time - time_old)/10000000 > 35 ) time_old = time;
|
|
||||||
|
|
||||||
//fill buffers until full (online mode will stop filling buffers after 2.5 sec lag betweeen output/input)
|
|
||||||
if ( nevts[id] < maxevts[id] && ( (time - time_old)/10000000 < 25 || online == 0 ) ) {
|
|
||||||
|
|
||||||
|
|
||||||
j = nevts[id] + iptr[id];
|
|
||||||
if (j >= maxevts[id]) j -= maxevts[id];
|
|
||||||
|
|
||||||
subevents[id][j].timestamp = time;
|
|
||||||
|
|
||||||
if (subevents[id][j].data == NULL) {
|
|
||||||
subevents[id][j].data = (unsigned int *) malloc(sizeof(unsigned int)*length);
|
|
||||||
if (subevents[id][j].data == NULL) {
|
|
||||||
printf("malloc failed\n");
|
|
||||||
return -1;
|
|
||||||
}
|
|
||||||
totmem += sizeof(unsigned int)*length;
|
|
||||||
}
|
|
||||||
else if (length != subevents[id][j].length) { //not needed anymore since always free data after use now. Keep for future ...
|
|
||||||
subevents[id][j].data = (unsigned int *) realloc(subevents[id][j].data, sizeof(unsigned int)*length);
|
|
||||||
if (subevents[id][j].data == NULL) {
|
|
||||||
printf("realloc failed\n");
|
|
||||||
return -1;
|
|
||||||
}
|
|
||||||
totmem = totmem - sizeof(unsigned int)*subevents[id][j].length + sizeof(unsigned int)*length;
|
|
||||||
}
|
|
||||||
|
|
||||||
subevents[id][j].length = length;
|
|
||||||
|
|
||||||
if (length>HEADER_LENGTH) {
|
|
||||||
if (fread(subevents[id][j].data + HEADER_LENGTH, (length-HEADER_LENGTH)*sizeof(int), 1, fpr) != 1) break;
|
|
||||||
nwords = nwords + (length-HEADER_LENGTH);
|
|
||||||
}
|
|
||||||
|
|
||||||
for (i=0; i < HEADER_LENGTH; i++) {
|
|
||||||
subevents[id][j].data[i] = subhead[i];
|
|
||||||
}
|
|
||||||
|
|
||||||
nevts[id]++;
|
|
||||||
evts_tot_read++;
|
|
||||||
|
|
||||||
}
|
|
||||||
else {
|
|
||||||
pause = 1;
|
|
||||||
break;
|
|
||||||
}
|
|
||||||
|
|
||||||
} // end while for fill buffers
|
|
||||||
/////////
|
|
||||||
|
|
||||||
|
|
||||||
/////////
|
|
||||||
// write event with minimum time to file
|
|
||||||
timemin_old = timemin;
|
|
||||||
timemin = -1;
|
|
||||||
for (i=0; i < idmax + 1; i++) { //could be MAX_ID but limit ourselves to current max, idmax
|
|
||||||
if (nevts[i] > 0) {
|
|
||||||
if (timemin == -1) {
|
|
||||||
timemin = subevents[i][iptr[i]].timestamp;
|
|
||||||
time_old = timemin;
|
|
||||||
min_id = i;
|
|
||||||
}
|
|
||||||
else if (subevents[i][iptr[i]].timestamp < timemin) {
|
|
||||||
timemin = subevents[i][iptr[i]].timestamp;
|
|
||||||
time_old = timemin;
|
|
||||||
min_id = i;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
if (timemin > -1) {
|
|
||||||
if (timemin < timemin_old) {
|
|
||||||
printf("\nWarning!!! timemin = %lld and timemin_old = %lld and min_id = %d\n", timemin, timemin_old, min_id);
|
|
||||||
outoforder++;
|
|
||||||
}
|
|
||||||
if (subevents[min_id][iptr[min_id]].data == NULL) {printf("Error: data = NULL\n"); return -1;}
|
|
||||||
fwrite(subevents[min_id][iptr[min_id]].data, sizeof(unsigned int)*subevents[min_id][iptr[min_id]].length, 1, fpw);
|
|
||||||
|
|
||||||
//free data memory up until it's needed again
|
|
||||||
free(subevents[min_id][iptr[min_id]].data);
|
|
||||||
subevents[min_id][iptr[min_id]].data = NULL;
|
|
||||||
totmem -= sizeof(unsigned int)*subevents[min_id][iptr[min_id]].length;
|
|
||||||
subevents[min_id][iptr[min_id]].length = 0;
|
|
||||||
subevents[min_id][iptr[min_id]].timestamp = 0;
|
|
||||||
|
|
||||||
nevts[min_id]--;
|
|
||||||
if (++iptr[min_id] >= maxevts[min_id]) iptr[min_id] -= maxevts[min_id];
|
|
||||||
evts_tot_write++;
|
|
||||||
}
|
|
||||||
else break;
|
|
||||||
/////////
|
|
||||||
|
|
||||||
|
|
||||||
//print statistics
|
|
||||||
//e_div=div(evts_tot_read,10000);
|
|
||||||
//if ( e_div.rem == 0)
|
|
||||||
if( evts_tot_read % 10000 == 0 )
|
|
||||||
printf("Malloc (%d MB) : evts in (\x1B[34m%lld\x1B[0m) : evts out (\x1B[32m%lld\x1B[0m) : diff (\x1B[31m%lld\x1B[0m)\r", (totmem)/1024/1024, evts_tot_read, evts_tot_write, evts_tot_read-evts_tot_write);
|
|
||||||
|
|
||||||
} //end main while
|
|
||||||
|
|
||||||
|
|
||||||
//cleanup
|
|
||||||
fclose(fpr);
|
|
||||||
fclose(fpw);
|
|
||||||
for (i=0; i<MAX_ID; i++){
|
|
||||||
free(subevents[i]);
|
|
||||||
totmem -= sizeof(struct subevent)*maxevts[i];
|
|
||||||
}
|
|
||||||
|
|
||||||
//print statistics last time
|
|
||||||
printf("\33[2K");
|
|
||||||
printf("Malloc (%d MB) : evts in (\x1B[34m%lld\x1B[0m) : evts out (\x1B[32m%lld\x1B[0m) : diff (\x1B[31m%lld\x1B[0m)\n", (totmem)/1024/1024, evts_tot_read, evts_tot_write, evts_tot_read-evts_tot_write);
|
|
||||||
if (outoforder > 0) printf("\x1B[31mWarning, there are %d events out of time order\x1B[0m\n", outoforder);
|
|
||||||
if (totmem != 0) printf("\x1B[31mError: total memory not conserved\x1B[0m\n");
|
|
||||||
|
|
||||||
|
|
||||||
return 0;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
|
@ -1,73 +0,0 @@
|
||||||
/*==================
|
|
||||||
|
|
||||||
Thie event builder both sort and build event. skip the *.to file.
|
|
||||||
|
|
||||||
===================*/
|
|
||||||
|
|
||||||
#include <stdio.h>
|
|
||||||
#include <stdlib.h>
|
|
||||||
#include <string.h>
|
|
||||||
#include <cmath>
|
|
||||||
#include <stdbool.h>
|
|
||||||
|
|
||||||
#include "TFile.h"
|
|
||||||
#include "TTree.h"
|
|
||||||
#include "TMath.h"
|
|
||||||
#include "TBenchmark.h"
|
|
||||||
#include "TStopwatch.h"
|
|
||||||
#include "TTreeIndex.h"
|
|
||||||
|
|
||||||
#include "../mapping.h"
|
|
||||||
|
|
||||||
#include "evtReader.h"
|
|
||||||
|
|
||||||
#define MAXMULTI 100
|
|
||||||
#define MAXBUFFER 100 // number of hit in memory buffer
|
|
||||||
|
|
||||||
int main(int argn, char **argv){
|
|
||||||
printf("=====================================\n");
|
|
||||||
printf("=== Event Builder from *.evt ===\n");
|
|
||||||
printf("=====================================\n");
|
|
||||||
|
|
||||||
if (argn < 5 ) {
|
|
||||||
printf("Usage :\n");
|
|
||||||
printf("%s [timeWindows] [Reject Flag] [SaveFileName] [*.evt File1 [*.evt File2] ...\n", argv[0]);
|
|
||||||
printf(" timeWindows [int]: 1 unit = 10 ns \n");
|
|
||||||
printf(" Reject Flag [int]: 0 = no rejection, 1 = reject no gamma, 2 = reject no GAGG. see mapping.h\n");
|
|
||||||
printf(" SaveFileName [str]: custom save file name \n");
|
|
||||||
return 1;
|
|
||||||
}
|
|
||||||
|
|
||||||
unsigned short timeWindow = atoi(argv[1]);
|
|
||||||
unsigned short rejectFlag = atoi(argv[2]);
|
|
||||||
TString outFileName = argv[3];
|
|
||||||
|
|
||||||
std::vector<std::string> inFileList;
|
|
||||||
for( int i = 4; i < argn; i++) inFileList.push_back(argv[i]);
|
|
||||||
|
|
||||||
//========== put data into RAM buffer.
|
|
||||||
std::vector<DataBlock> hitListA, hitListB;
|
|
||||||
evtReader * reader = nullptr;
|
|
||||||
|
|
||||||
for( size_t i = 0 ; i < inFileList.size(); i++){
|
|
||||||
|
|
||||||
reader = new evtReader(inFileList[i]);
|
|
||||||
reader->ScanNumberOfBlock();
|
|
||||||
|
|
||||||
// reader->ReadBatchDataAndSort(MAXBUFFER);
|
|
||||||
// hitListA = reader->GetDataList();
|
|
||||||
|
|
||||||
// reader->ReadBatchDataAndSort(MAXBUFFER);
|
|
||||||
// hitListB = reader->GetDataList();
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
delete reader;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
return 0;
|
|
||||||
}
|
|
|
@ -1,375 +0,0 @@
|
||||||
#include <stdio.h>
|
|
||||||
#include <iostream>
|
|
||||||
#include <fstream>
|
|
||||||
#include <stdlib.h>
|
|
||||||
#include <string.h>
|
|
||||||
#include "TFile.h"
|
|
||||||
#include "TTree.h"
|
|
||||||
#include "TString.h"
|
|
||||||
#include "TMath.h"
|
|
||||||
#include <vector>
|
|
||||||
|
|
||||||
#define NUMDET 64 /// number of detector
|
|
||||||
#define STARTDETID 15
|
|
||||||
|
|
||||||
std::vector<std::string> SplitStr(std::string tempLine, std::string splitter, int shift = 0){
|
|
||||||
|
|
||||||
std::vector<std::string> output;
|
|
||||||
|
|
||||||
size_t pos;
|
|
||||||
do{
|
|
||||||
pos = tempLine.find(splitter); /// fine splitter
|
|
||||||
if( pos == 0 ){ ///check if it is splitter again
|
|
||||||
tempLine = tempLine.substr(pos+1);
|
|
||||||
continue;
|
|
||||||
}
|
|
||||||
|
|
||||||
std::string secStr;
|
|
||||||
if( pos == std::string::npos ){
|
|
||||||
secStr = tempLine;
|
|
||||||
}else{
|
|
||||||
secStr = tempLine.substr(0, pos+shift);
|
|
||||||
tempLine = tempLine.substr(pos+shift);
|
|
||||||
}
|
|
||||||
|
|
||||||
///check if secStr is begin with space
|
|
||||||
while( secStr.substr(0, 1) == " "){
|
|
||||||
secStr = secStr.substr(1);
|
|
||||||
};
|
|
||||||
|
|
||||||
///check if secStr is end with space
|
|
||||||
while( secStr.back() == ' '){
|
|
||||||
secStr = secStr.substr(0, secStr.size()-1);
|
|
||||||
}
|
|
||||||
|
|
||||||
output.push_back(secStr);
|
|
||||||
//printf(" |%s---\n", secStr.c_str());
|
|
||||||
|
|
||||||
}while(pos != std::string::npos );
|
|
||||||
|
|
||||||
return output;
|
|
||||||
}
|
|
||||||
|
|
||||||
std::vector<std::vector<double>> LoadCorrectionParameters(TString corrFile){
|
|
||||||
|
|
||||||
printf("==================== load correction parameters : %s", corrFile.Data());
|
|
||||||
std::ifstream file;
|
|
||||||
file.open(corrFile.Data());
|
|
||||||
|
|
||||||
std::vector<std::vector<double>> corr;
|
|
||||||
corr.clear();
|
|
||||||
|
|
||||||
std::vector<double> detCorr;
|
|
||||||
detCorr.clear();
|
|
||||||
|
|
||||||
if( file.is_open() ){
|
|
||||||
|
|
||||||
while( file.good() ){
|
|
||||||
|
|
||||||
std::string line;
|
|
||||||
getline(file, line);
|
|
||||||
|
|
||||||
if( line.substr(0,1) == "#" ) continue;
|
|
||||||
if( line.substr(0,2) == "//" ) continue;
|
|
||||||
if( line.size() == 0 ) continue;
|
|
||||||
|
|
||||||
std::vector<std::string> temp = SplitStr(line, " ");
|
|
||||||
|
|
||||||
detCorr.clear();
|
|
||||||
for( int i = 0; i < (int) temp.size() ; i++){
|
|
||||||
detCorr.push_back(std::stod(temp[i]));
|
|
||||||
}
|
|
||||||
corr.push_back(detCorr);
|
|
||||||
}
|
|
||||||
|
|
||||||
file.close();
|
|
||||||
|
|
||||||
printf(".... done\n");
|
|
||||||
printf("===== correction parameters \n");
|
|
||||||
for( int i = 0; i < (int) corr.size(); i++){
|
|
||||||
printf("det : %2d | ", i );
|
|
||||||
int len = (int) corr[i].size();
|
|
||||||
for( int j = 0; j < len - 1 ; j++){
|
|
||||||
printf("%6.2f, ", corr[i][j]);
|
|
||||||
}
|
|
||||||
printf("%6.2f\n", corr[i][len-1]);
|
|
||||||
}
|
|
||||||
|
|
||||||
}else{
|
|
||||||
printf(".... fail\n");
|
|
||||||
}
|
|
||||||
|
|
||||||
return corr;
|
|
||||||
}
|
|
||||||
|
|
||||||
|
|
||||||
//###################################################################################
|
|
||||||
//################ ###########################
|
|
||||||
//################ main ###########################
|
|
||||||
//################ ###########################
|
|
||||||
//###################################################################################
|
|
||||||
int main(int argn,char **argv) {
|
|
||||||
if ( argn == 1 ) {
|
|
||||||
printf("Usage: \n");
|
|
||||||
printf("%s file_in.evt raw_Opt timeWidow correctionFile\n", argv[0]);
|
|
||||||
printf(" | | |\n");
|
|
||||||
printf(" | | + correction file, row for det, col for order of correction\n");
|
|
||||||
printf(" | |\n");
|
|
||||||
printf(" | + when build event, event build window, 1 = 10 ns, default 100\n");
|
|
||||||
printf(" + default 0 = raw, 1 = event build \n");
|
|
||||||
/// std::cerr<<"Usage:\n "<<argv[0]<<" filein.evt fileout correctfilename STARTDETIDnumber maxtime start_buf# stop_buf#\n
|
|
||||||
/// Converts physics buffers (type 30) from \'file.evt\' to \'fileout.ev2\' from \'start_buf#\' until\n
|
|
||||||
/// 'stop_buf#' or whole file if no event numbers are given or \'start buf#\' = 0\n
|
|
||||||
/// STARTDETIDnum is the number of the dE ADC on a scale of 1 to n.\n
|
|
||||||
/// maxtime defaults to 100 if not specified\n
|
|
||||||
/// **Use \'NULL\' for the output file to avoid writing an ev2 file. \n
|
|
||||||
/// Note that the start and end buffer numbers are for the input where each adc \n
|
|
||||||
/// read forms another buffer.\n This version sets the time in event of the start detector to 100 and all other times relative to that.
|
|
||||||
/// If a correct file is specified, it dorrects the detectors in the file for walk.
|
|
||||||
/// It does not write out events which do not contain the start detector.\n
|
|
||||||
/// Also it only writes out events in which every ADC times in within the limits specified in the correct.tab file."<<std::endl;
|
|
||||||
exit(0);
|
|
||||||
}
|
|
||||||
|
|
||||||
printf("=======================================================\n");
|
|
||||||
printf("=== XIA evt file to CERN ROOT ===\n");
|
|
||||||
printf("=======================================================\n");
|
|
||||||
printf("The start detector number is %d\n", STARTDETID);
|
|
||||||
|
|
||||||
unsigned long long blockNum=0; /// this is total block
|
|
||||||
unsigned long long block30Num=0; /// this is number of block-30
|
|
||||||
unsigned long long eventID=0; /// this is eventID
|
|
||||||
|
|
||||||
///for( int i = 0 ; i < argn; i++) printf("............. %s \n", argv[i]);
|
|
||||||
|
|
||||||
int rawOpt = 0;
|
|
||||||
if ( argn >= 3 ) rawOpt = atoi(argv[2]);
|
|
||||||
|
|
||||||
int timeWindow = 100;
|
|
||||||
if ( argn >= 4 ) timeWindow = atoi(argv[3]);
|
|
||||||
|
|
||||||
TString corrFileName = "";
|
|
||||||
bool hasCorr = false;
|
|
||||||
if ( argn == 5 ) {
|
|
||||||
corrFileName = argv[4];
|
|
||||||
hasCorr = true;
|
|
||||||
}
|
|
||||||
|
|
||||||
FILE *infile=fopen(argv[1],"r");
|
|
||||||
if (infile==NULL) {
|
|
||||||
printf("cannot open file : %s \n", argv[1]);
|
|
||||||
///std::cerr<<"Problem opening "<<argv[1]<<std::endl;
|
|
||||||
exit(0);
|
|
||||||
}
|
|
||||||
|
|
||||||
TString inFileName = argv[1];
|
|
||||||
TString outFileName = inFileName;
|
|
||||||
outFileName.Remove(inFileName.First('.'));
|
|
||||||
if( rawOpt == 0 ) outFileName.Append("_raw");
|
|
||||||
outFileName.Append(".root");
|
|
||||||
|
|
||||||
printf(" In file : %s \n", inFileName.Data());
|
|
||||||
printf("Out file : %s \n", outFileName.Data());
|
|
||||||
|
|
||||||
std::vector<std::vector<double>> corr;
|
|
||||||
if( hasCorr ) corr = LoadCorrectionParameters(corrFileName);
|
|
||||||
|
|
||||||
int chan,slot,chann;
|
|
||||||
int pu; /// pile up
|
|
||||||
int energy;
|
|
||||||
double cEnergy;
|
|
||||||
unsigned long long evtime;
|
|
||||||
unsigned short cfd;
|
|
||||||
|
|
||||||
int pileupcount = 0;
|
|
||||||
int zerocount = 0;
|
|
||||||
int PileUp[64];
|
|
||||||
|
|
||||||
const unsigned long maskpu = 2147483648;
|
|
||||||
const unsigned long multiplier = 4294967296LL;
|
|
||||||
|
|
||||||
double energyA[NUMDET];
|
|
||||||
double cEnergyA[NUMDET];
|
|
||||||
unsigned long long timeA[NUMDET];
|
|
||||||
int puA[NUMDET];
|
|
||||||
long long diffTimeA[NUMDET];
|
|
||||||
unsigned short cfdA[NUMDET];
|
|
||||||
int multi = 0; /// multipicilty in an event
|
|
||||||
int detMulti[NUMDET]; /// multiplicity in a detector in an event
|
|
||||||
|
|
||||||
TFile * outFile = new TFile(outFileName, "RECREATE");
|
|
||||||
outFile->cd();
|
|
||||||
TTree * tree = new TTree("tree", "tree");
|
|
||||||
|
|
||||||
tree->Branch("eventID", &eventID, "event_number/l");
|
|
||||||
|
|
||||||
if ( rawOpt == 0 ){ /// when save raw data
|
|
||||||
tree->Branch("chan", &chan, "chan/I");
|
|
||||||
tree->Branch("slot", &slot, "slot/I");
|
|
||||||
tree->Branch("chann", &chann, "channel number/I");
|
|
||||||
tree->Branch("pu", &pu, "pile-up/I");
|
|
||||||
tree->Branch("energy", &energy, "energy/I");
|
|
||||||
if( hasCorr) tree->Branch("cEnergy", &cEnergy, "corrected_energy/D");
|
|
||||||
tree->Branch("time", &evtime, "timestamp/l");
|
|
||||||
tree->Branch("cfd", &cfd, "cfd/s");
|
|
||||||
}else{ /// when build event by time-window
|
|
||||||
tree->Branch("energy", energyA, Form("energy[%d]/D", NUMDET));
|
|
||||||
if( hasCorr) tree->Branch("cEnergy", cEnergyA, Form("corrected_energy[%d]/D", NUMDET));
|
|
||||||
tree->Branch("time", timeA, Form("timestamp[%d]/l", NUMDET));
|
|
||||||
tree->Branch("dtime", diffTimeA, Form("diff_time[%d]/L", NUMDET));
|
|
||||||
tree->Branch("pu", puA, Form("pile_up[%d]/I", NUMDET));
|
|
||||||
tree->Branch("cfd", cfdA, Form("cfd[%d]/I", NUMDET));
|
|
||||||
tree->Branch("multi", &multi, "multiplicity/I");
|
|
||||||
tree->Branch("detMulti", detMulti, Form("det_multiplicity[%d]/I", NUMDET));
|
|
||||||
}
|
|
||||||
|
|
||||||
///change this for 64bit compiler long *bufsam=NULL;
|
|
||||||
|
|
||||||
//clear energy and time array
|
|
||||||
for( int i = 0; i < NUMDET; i++){
|
|
||||||
energyA[i] = TMath::QuietNaN();
|
|
||||||
cEnergyA[i] = TMath::QuietNaN();
|
|
||||||
timeA[i] = 0;
|
|
||||||
diffTimeA[i] = -999;
|
|
||||||
cfdA[i] = 0;
|
|
||||||
puA[i] = -1;
|
|
||||||
detMulti[i] = 0;
|
|
||||||
}
|
|
||||||
multi = 0;
|
|
||||||
|
|
||||||
unsigned long long startTime = 0;
|
|
||||||
long long diffTime = 0;
|
|
||||||
|
|
||||||
int bread = 1;
|
|
||||||
int bsam = 2;
|
|
||||||
long * bufsiz=new long[bsam];
|
|
||||||
unsigned int *bufsam = NULL;
|
|
||||||
|
|
||||||
printf("============ Start looping events | build event ? %s", rawOpt == 0 ? "No" : "Yes");
|
|
||||||
if( rawOpt == 1 ) {
|
|
||||||
printf(" time window : +- %d click\n", timeWindow);
|
|
||||||
}else{
|
|
||||||
printf("\n");
|
|
||||||
}
|
|
||||||
while ( !feof(infile) ) {
|
|
||||||
|
|
||||||
// get buffer size
|
|
||||||
///change long -> int for 64 bit
|
|
||||||
fread(bufsiz,sizeof(int),bread,infile); /// read 1 int (4 byte) from infile and save to bufsize
|
|
||||||
int bsize = bufsiz[0] -4 ;
|
|
||||||
if (feof(infile)) break;
|
|
||||||
blockNum ++;
|
|
||||||
|
|
||||||
///change for 64bit bufsam=new long[bsize/4+1];
|
|
||||||
bufsam = new unsigned int[bsize/4+1];
|
|
||||||
fread((char*)bufsam, 1, bsize, infile); /// read bsize of 1 byte from infile and save to char
|
|
||||||
///printf("============ bsize : %d \n", bsize);
|
|
||||||
///for( int i = 0; i < bsize; i++) printf("%d, ", bufsam[i]);
|
|
||||||
///printf("\n");
|
|
||||||
|
|
||||||
if (bufsam[0] == 30) {
|
|
||||||
block30Num ++;
|
|
||||||
chan = (bufsam[2]) & (15);
|
|
||||||
slot = ((bufsam[2]) & (240))/16;
|
|
||||||
chann = (slot - 2)*16 + chan + 1;
|
|
||||||
pu = ((bufsam[2]) & (maskpu))/maskpu;
|
|
||||||
energy = ((bufsam[5]) & 65535);
|
|
||||||
unsigned long long evtimehi = ((bufsam[4]) & 65535);
|
|
||||||
unsigned long long evtimelo = bufsam[3];
|
|
||||||
evtime = evtimelo + multiplier*evtimehi;
|
|
||||||
cfd = bufsam[4]/65536;
|
|
||||||
|
|
||||||
if ( energy == 0 ) zerocount++;
|
|
||||||
if ( pu > 0 ) pileupcount++;
|
|
||||||
if ((pu > 0 ) && ( chann > 0 ) && ( chann < 65 )) PileUp[chann-1]++;
|
|
||||||
|
|
||||||
if( blockNum % 100000 == 0 ) printf(".");
|
|
||||||
///if( blockNum % 100000 == 0 ) printf("%llu \n", blockNum);
|
|
||||||
///if( block30Num < 50) printf("b30: %10llu, chan: %d, slot: %d, chann: %2d, pu: %2d, energy: %5d, evtime: %13llu, cfd: %d\n", block30Num, chan, slot, chann, pu, energy, evtime, cfd);
|
|
||||||
|
|
||||||
/// energy correction
|
|
||||||
if ( hasCorr ){
|
|
||||||
cEnergy = 0;
|
|
||||||
int order = (int) corr[chann-1].size();
|
|
||||||
for( int i = 0; i < order ; i++){
|
|
||||||
cEnergy += corr[chann-1][i] * TMath::Power((double)energy, i);
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
if ( rawOpt == 0 ) {
|
|
||||||
eventID++;
|
|
||||||
outFile->cd();
|
|
||||||
tree->Fill();
|
|
||||||
}else{ /// build event
|
|
||||||
|
|
||||||
if ( startTime == 0 ) startTime = evtime;
|
|
||||||
|
|
||||||
diffTime = evtime - startTime;
|
|
||||||
|
|
||||||
if( -timeWindow < diffTime && diffTime < timeWindow ){
|
|
||||||
|
|
||||||
if( !TMath::IsNaN(energyA[chann-1]) ) detMulti[chann-1] ++;
|
|
||||||
energyA[chann-1] = energy;
|
|
||||||
cEnergyA[chann-1] = cEnergy;
|
|
||||||
timeA[chann-1] = evtime;
|
|
||||||
diffTimeA[chann-1] = diffTime;
|
|
||||||
puA[chann-1] = pu;
|
|
||||||
detMulti[chann-1]++;
|
|
||||||
multi++;
|
|
||||||
|
|
||||||
|
|
||||||
}else{
|
|
||||||
/// fill tree
|
|
||||||
eventID++;
|
|
||||||
outFile->cd();
|
|
||||||
tree->Fill();
|
|
||||||
/// clear energy and time array
|
|
||||||
multi = 0;
|
|
||||||
for( int i = 0; i < NUMDET; i++){
|
|
||||||
energyA[i] = TMath::QuietNaN();
|
|
||||||
cEnergyA[i] = TMath::QuietNaN();
|
|
||||||
timeA[i] = 0;
|
|
||||||
diffTimeA[i] = -999;
|
|
||||||
puA[i] = -1;
|
|
||||||
detMulti[i] = 0;
|
|
||||||
cfdA[i] = 0;
|
|
||||||
}
|
|
||||||
|
|
||||||
/// fill the 1st data of a new event
|
|
||||||
startTime = evtime;
|
|
||||||
energyA[chann-1] = energy;
|
|
||||||
cEnergyA[chann-1] = cEnergy;
|
|
||||||
timeA[chann-1] = evtime;
|
|
||||||
diffTimeA[chann-1] = 0;
|
|
||||||
puA[chann-1] = pu;
|
|
||||||
detMulti[chann-1]++;
|
|
||||||
multi++;
|
|
||||||
}
|
|
||||||
}
|
|
||||||
|
|
||||||
} ///end if bufsam[0]=30
|
|
||||||
|
|
||||||
}
|
|
||||||
|
|
||||||
delete [] bufsiz;
|
|
||||||
delete [] bufsam;
|
|
||||||
fclose(infile);
|
|
||||||
|
|
||||||
printf("\n============ end of event loop, totoal block read: %llu \n", blockNum);
|
|
||||||
|
|
||||||
eventID++;
|
|
||||||
outFile->cd();
|
|
||||||
tree->Write();
|
|
||||||
outFile->Close();
|
|
||||||
|
|
||||||
|
|
||||||
//========================= Print summary
|
|
||||||
printf("============================================\n");
|
|
||||||
///printf(" number of block: %llu\n", blockNum);
|
|
||||||
printf(" number of type 30 block: %llu\n", block30Num);
|
|
||||||
printf(" event built: %llu\n", eventID);
|
|
||||||
printf("============================================\n");
|
|
||||||
|
|
||||||
return 0;
|
|
||||||
}
|
|
||||||
|
|
Loading…
Reference in New Issue
Block a user