added skip event in to2root
This commit is contained in:
parent
044ad47bd8
commit
bd453a99e0
50
Analyzer.C
50
Analyzer.C
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@ -34,6 +34,8 @@ TH2F * hcoin;
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TH2F * hcrystalBGO;
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TH1F * hTDiff;
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///----- after calibration and BGO veto
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TH2F * heCalVID;
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TH1F * heCal[NCRYSTAL];
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@ -58,6 +60,8 @@ void Analyzer::Begin(TTree * tree){
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heVID = new TH2F("heVID", "e vs ID; det ID; e [ch]", NCRYSTAL, 0, NCRYSTAL, rawEnergyRange[1] - rawEnergyRange[0], rawEnergyRange[0], rawEnergyRange[1]);
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heCalVID = new TH2F("heCalVID", Form("eCal vs ID (BGO veto > %.1f); det ID; Energy [keV]", BGO_threshold), NCRYSTAL, 0, NCRYSTAL, (energyRange[2] - energyRange[1])/energyRange[0], energyRange[1], energyRange[2]);
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hTDiff = new TH1F("hTDiff", "data time different within an event; tick [10 ns]", 110, 0, 110);
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heVID->SetNdivisions(-409, "X");
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heCalVID->SetNdivisions(-409, "X");
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@ -113,32 +117,39 @@ Bool_t Analyzer::Process(Long64_t entry){
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for( int i = 0; i < NCRYSTAL; i++) eCal[i] = TMath::QuietNaN();
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///printf("---------------------------- %d \n", multi);
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///=========== Looping data for the event
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for( int i = 0; i < multi ; i ++){
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int id = detID[i];
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///printf("%d %f %llu\n", id, e[i], e_t[i]);
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//======== Fill raw data
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if( detID[i] < 100 ){ /// gamma data
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heVID->Fill( detID[i], e[i]);
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he[detID[i]]->Fill(e[i]);
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if( 0 <= id && id < NCRYSTAL ){ /// gamma data
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heVID->Fill( id, e[i]);
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he[id]->Fill(e[i]);
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for ( int j = i + 1; j < multi; j++){
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if( 100 <= detID[j] && detID[j] < 200 ) hcrystalBGO->Fill(detID[i], detID[j]-100); /// crystal - BGO coincident
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if( 100 <= detID[j] && detID[j] < 200 ) hcrystalBGO->Fill(id, detID[j]-100); /// crystal - BGO coincident
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if( detID[j] < 100 ) hcoin->Fill(detID[i], detID[j]); /// crystal-crystal coincident
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if( detID[j] < 100 ) hcoin->Fill(id, detID[j]); /// crystal-crystal coincident
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}
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}
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if ( 100 < detID[i] && detID[i] < 200 ){ /// BGO data
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if ( 100 < id && id < 200 ){ /// BGO data
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}
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if ( i > 0 ) hTDiff->Fill( e_t[i] - e_t[0]);
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//======== BGO veto
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bool dropflag = false;
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if( detID[i] < 100 && multi > 1) {
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if( id < NCRYSTAL && multi > 1) {
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for( int j = i + 1; j < multi; j++){
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if( detID[j] > 100 && (detID[j]-100)*4 < detID[i] && detID[i] < (detID[j]-100 +1)*4) {
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if( detID[j] >= 100 && (detID[j]-100)*4 <= id && id < (detID[j]-100 +1)*4) {
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dropflag = true;
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break;
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}
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@ -146,27 +157,28 @@ Bool_t Analyzer::Process(Long64_t entry){
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}
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if( dropflag ) return kTRUE;
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//========= apply correction
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//int order = (int) eCorr[detID].size();
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//for( int i = 0; i < order ; i++){
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// eCal[detID] += eCorr[detID][i] * TMath::Power(e[detID], i);
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//}
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if( detID[i] < 100 ) {
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if( 0<= id && id < NCRYSTAL ) {
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if( e_corr == "" ){
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eCal[detID[i]] = e[i];
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eCal[id] = e[i];
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}else{
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eCal[detID[i]] = eCorr[detID[i]][0] + eCorr[detID[i]][1] * e[i];
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///========= apply correction
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int order = (int) eCorr[id].size();
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eCal[id] = 0;
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for( int k = 0; k < order ; k++){
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eCal[id] += eCorr[id][k] * TMath::Power(e[i], k);
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}
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}
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heCalVID->Fill( detID[i], eCal[detID[i]]);
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heCal[detID[i]]->Fill(eCal[detID[i]]);
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heCalVID->Fill( id, eCal[id]);
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heCal[id]->Fill(eCal[id]);
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for ( int j = i + 1; j < multi; j++){
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if( 100 <= detID[j] && detID[j] < 200 ) hcrystalBGO_G->Fill(detID[i], detID[j]-100); /// crystal - BGO coincident
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if( 100 <= detID[j] && detID[j] < 200 ) hcrystalBGO_G->Fill(id, detID[j]-100); /// crystal - BGO coincident
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}
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}
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}
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@ -31,8 +31,6 @@
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#define RAWE_REBIN_FACTOR 2.0 // Rebin 32k pixie16 spectra to something smaller to fit better into 8k.
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#define MAXMULTI 100
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#include "../mapping.h"
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/////////////////////
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@ -80,27 +78,38 @@ int main(int argc, char **argv) {
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printf("=====================================\n");
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// Check that the corrent number of arguments were provided.
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if (argc != 2 && argc != 3 ) {
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if (argc != 2 && argc != 3 && argc != 4 && argc != 5) {
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printf("Incorrect number of arguments:\n");
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printf("%s [*.to File] [timeWindow] \n", argv[0]);
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printf("%s [*.to File] <timeWindow> <fraction> <saveFile>\n", argv[0]);
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printf(" timeWindow : number of tick, 1 tick = 10 ns. default = 100 \n");
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printf(" fraction : 0 to 100, default 100, last fraction of evt.to to root \n");
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printf(" e.g. 10, last 10%% of the evt.to to root \n");
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printf(" saveFile : default is replace evt.to with root \n");
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return 1;
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}
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//CERN ROOT things
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TString inFileName = argv[1];
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TString outFileName = inFileName;
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int timeWindow = 100;
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if( argc >= 3 ) timeWindow = atoi(argv[2]);
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int frac = 100;
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if( argc >= 4 ) frac = abs(atoi(argv[3]));
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TString outFileName = inFileName;
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outFileName.Remove(inFileName.First('.'));
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outFileName.Append(".root");
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int pos = inFileName.Last('/');
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outFileName.Remove(0, pos+1);
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if( argc >= 5) outFileName = argv[4];
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printf(" in file : %s \n", inFileName.Data());
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printf(" our file : %s \n", outFileName.Data());
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printf(" our file : \033[1;31m%s\033[m\n", outFileName.Data());
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printf(" max number of detector channal: %d \n", MAX_ID);
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printf(" Skipping the frist \033[0;34m %d %% \033[m of data \n", 100 - frac);
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printf("------------------------ Event building time window : %d tics = %d nsec \n", timeWindow, timeWindow*10);
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TFile * outRootFile = new TFile(outFileName, "recreate");
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@ -109,9 +118,9 @@ int main(int argc, char **argv) {
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unsigned long long evID = 0;
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int multi = 0;
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int id[MAXMULTI] = {0};
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double e[MAXMULTI] = {TMath::QuietNaN()};
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unsigned long long e_t[MAXMULTI] = {0};
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int id[MAX_ID] = {0};
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double e[MAX_ID] = {TMath::QuietNaN()};
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unsigned long long e_t[MAX_ID] = {0};
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Int_t multiCry = 0 ; /// this is total multiplicity for all crystal
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//unsigned short pileup[MAXMULTI];
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@ -144,7 +153,7 @@ int main(int argc, char **argv) {
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/////////////////////
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// MAIN WHILE LOOP //
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/////////////////////
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while (1) { //main while loop
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while (!feof(fpr)) { //main while loop
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/////////////////////////////////
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// UNPACK DATA AND EVENT BUILD //
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@ -152,11 +161,17 @@ int main(int argc, char **argv) {
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long long int etime = -1;
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long long int tdif = -1;
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int sevtmult=0;
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while (1) { //get subevents and event build for one "event"
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if (fread(sub, sizeof(int)*HEADER_LENGTH, 1, fpr) != 1) break;
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fprpos = ftell(fpr);
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if ( fprpos < fprsize * ( 1. - frac/100.) ) {
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//printf("%ld / %ld \n", fprpos, fprsize);
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data.elen = (sub[0] & 0x7FFE0000) >> 17;
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fseek(fpr, sizeof(int)*(data.elen - HEADER_LENGTH), SEEK_CUR);
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continue;
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}
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data.chn = sub[0] & 0xF; /// channel in digitizer
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data.sln = (sub[0] & 0xF0) >> 4; /// digitizer ID
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@ -204,12 +219,12 @@ int main(int argc, char **argv) {
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pileUpCount++;
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}
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//more data than just the header; read entire sub event, first rewind, then read data.elen
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fseek(fpr, -sizeof(int)*HEADER_LENGTH, SEEK_CUR);
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//if (fread(sub, sizeof(int)*dataBlock[sevtmult].elen, 1, fpr) != 1) break;
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if (fread(sub, sizeof(int)*data.elen, 1, fpr) != 1) break;
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/**
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//trace
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k=0;
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@ -269,7 +284,6 @@ int main(int argc, char **argv) {
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dataCount, (int)((100*pileUpCount)/dataCount), evID+1, (float)dataCount/((float)evID+1), (100*fprpos/fprsize), tempf, TMath::Floor(time/60.), time - TMath::Floor(time/60.)*60.);
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}
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outRootFile->cd();
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tree->Fill();
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137
process_run
137
process_run
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@ -1,22 +1,32 @@
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#!/bin/bash
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DIR=$(pwd)
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DATA_DIR=data
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TIMEWINDOW=100
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Method=1 #1 : evt -> evt.to -> root , 2 : evt -> _raw.root -> root
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if [ $Method -eq 1 ]; then
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DATA_DIR=.
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else
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DATA_DIR=data
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fi
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if [ $# -eq 0 ] || [ $1 == "-help" ]; then
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echo "$./process_run [Run Folder] [Merge] [BuildEvents] [Analysis]"
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echo "$./process_run [RunFile] [Merge] [BuildEvents] [Analysis]"
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echo " Run Folder = the name of run folder"
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echo " Merge = 1/0/-1 || 1 = merge, 0 = not merge, -1 = force merge "
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echo " BuildEvents = 1/0/-1 || "
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echo " BuildEvents = 1/0/-1 || if |x| > 1, take last x %, e.g. 10, last 10 %"
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echo " Analysis = 1/0/-1 || "
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echo ""
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if [ $Method -eq 1 ]; then
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ls -l --color $DATA_DIR/
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fi
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exit 1
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fi;
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RunFile=$1
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RunFolder=$1
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isMerge=1
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@ -34,6 +44,115 @@ BLUE='\033[0;34m'
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Cyan='\033[0;36m'
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NC='\033[0m'
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################################### method 1 evt -> evt.to -> root
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if [ $Method -eq 1 ]; then
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if [ -f $RunFile ]; then
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echo -e "found evt files. "${RunFile}
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else
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echo -e "!!!!! cannot found evt files ${RunFile}. Abort."
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exit
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fi
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pos=`expr index "${RunFile}" /`
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temp=${RunFile:pos}
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pos=`expr index "${temp}" /`
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toFile=${temp:pos}".to"
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pos=`expr index "${toFile}" .`
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rootFile=${toFile:0:pos}"root"
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#echo ${RunFile}
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#echo ${toFile}
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#echo ${rootFile}
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Time sort evt to evt.to $NC"
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if [ $isMerge -eq 1 ]; then
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if [ -f ${toFile} ]; then #_raw.root exist
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#check evt DateTime
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evtDateTime=`stat -c "%Z" ${RunFile} | sort -rn | head -1`
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toDateTime=`stat -c "%Z" ${toFile} | sort -rn | head -1`
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if [ $evtDateTime -gt $toDateTime ]; then #if evt file is newer
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./armory/pxi-time-order ${RunFile}
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Time sort finished$NC"
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else
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echo "there is no newer evt files"
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fi
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else
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./armory/pxi-time-order ${RunFile}
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Time sort finished$NC"
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fi
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fi
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if [ $isMerge -eq 0 ]; then
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echo -e "$YELLOW skipped by user $NC"
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fi
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if [ $isMerge -eq -1 ]; then
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echo -e "$YELLOW forced by user $NC"
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./armory/pxi-time-order ${RunFile}
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Time sort finished$NC"
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fi
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Build Events $NC"
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if [ ${isBuildEvents} -ge 1 ]; then
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if [ -f ${rootFolder} ]; then # root exist
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toDateTime=`stat -c "%Z" ${toFolder} | sort -rn | head -1`
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rootDateTime=`stat -c "%Z" ${rootFolder} | sort -rn | head -1`
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if [ ${toDateTime} -gt ${rootDateTime} ]; then
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if [ ${isBuildEvents} -gt 1 ]; then
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./armory/to2root ${toFile} $TIMEWINDOW ${isBuildEvents}
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else
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./armory/to2root ${toFile} $TIMEWINDOW
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fi
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Build Events finsihed.$NC"
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else
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echo -e "${rootFile} is up-to-date."
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fi
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else
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./armory/to2root ${toFile} $TIMEWINDOW
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Build Events finsihed.$NC"
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fi
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fi
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if [ ${isBuildEvents} -eq 0 ]; then
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echo -e "$YELLOW skipped by user $NC"
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fi
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if [ ${isBuildEvents} -le -1 ]; then
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echo -e "$YELLOW forced by user $NC"
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if [ ${isBuildEvents} -lt 1 ]; then
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./armory/to2root ${toFile} $TIMEWINDOW ${isBuildEvents}
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else
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./armory/to2root ${toFile} $TIMEWINDOW
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fi
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Build Events finsihed.$NC"
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fi
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Analysis $NC"
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if [ ${isAnalysis} -eq 1 ]; then
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root -l "process_run.c(\"${rootFile}\")"
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fi
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if [ ${isAnalysis} -eq 0 ]; then
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echo -e "$YELLOW skipped by user $NC"
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fi
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if [ ${isAnalysis} -eq -1 ]; then
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echo -e "$YELLOW forced by user $NC"
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root -l "process_run.c(\"${rootFile}\")"
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fi
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fi
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################################### method 2 evt -> _raw.root -> root
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if [ $Method -eq 2 ]; then
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if [ -f $DATA_DIR/$RunFolder/*.evt ]; then
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echo -e "found evt files."
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else
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@ -42,7 +161,6 @@ else
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fi
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Merge evt files to ${RunFolder}_raw.root $NC"
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if [ $isMerge -eq 1 ]; then
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# check is ${RunFolder}"_raw.root" exist
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if [ -f ${RunFolder}_raw.root ]; then #_raw.root exist
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@ -54,11 +172,8 @@ if [ $isMerge -eq 1 ]; then
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else
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echo "there is no newer evt files"
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fi
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else
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./armory/MergeEVT ${RunFolder}"_raw.root" `ls ${DATA_DIR}/${RunFolder}/*.evt`
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fi
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fi
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@ -75,7 +190,6 @@ echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Merge finished$NC"
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echo -e "$RED>>> `date` >>>>>>>>>>>>>>>>>>>>>>> Build Events$NC"
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if [ ${isBuildEvents} -eq 1 ]; then
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if [ -f ${RunFolder}.root ]; then # root exist
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rawRootDateTime=`stat -c "%Z" ${RunFolder}"_raw.root" | sort -rn | head -1`
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rootDateTime=`stat -c "%Z" ${RunFolder}".root" | sort -rn | head -1`
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@ -88,7 +202,6 @@ if [ ${isBuildEvents} -eq 1 ]; then
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else
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./armory/EventBuilder ${RunFolder}"_raw.root" $TIMEWINDOW
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fi
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fi
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if [ ${isBuildEvents} -eq 0 ]; then
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@ -116,3 +229,7 @@ if [ ${isAnalysis} -eq -1 ]; then
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root -l "process_run.c(\"${RunFolder}.root\")"
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fi
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fi
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