#!/bin/bash

if [ $# -ne 1 ]; then
    echo "Usage: $0 <parameter file>"
    exit 1
fi

PARAM_FILE="$1"

if [ ! -f "$PARAM_FILE" ]; then
    echo "Error: File '$PARAM_FILE' not found!"
    exit 1
fi

source "$PARAM_FILE"

# Construct output filename from input
baseName=$(basename "$inputDataFile" .root)
outPutFileName="${baseName}_output.root"

./Jericho "$inputDataFile" \
          "$calFile" \
          "$gePromptGatesFile" \
          "$outPutDirectory" \
          "$outPutFileName" \
          "$trinABCoin" \
          "$addbackDiagonals" \
          "$alphaCutsFileName" \
          "$geTimingPairFile" \
          "$bgoTimeGateNS" \
          "$labrTimingPairFile"