Commit Graph

  • 4e6e101370 modified: TrackRecon.C new file: anasen_fem/cfrac_pred_2026-10-28/README.md new file: anasen_fem/cfrac_pred_2026-10-28/band_centre.csv new file: anasen_fem/cfrac_pred_2026-10-28/cfrac_pred_method.md new file: anasen_fem/cfrac_pred_2026-10-28/check_extrapolation.log new file: anasen_fem/cfrac_pred_2026-10-28/collect_slices.log new file: anasen_fem/cfrac_pred_2026-10-28/fit_function.log new file: anasen_fem/cfrac_pred_2026-10-28/function_map.csv new file: anasen_fem/cfrac_pred_2026-10-28/make_cfrac_pred.log new file: anasen_fem/cfrac_pred_2026-10-28/map_function.log new file: anasen_fem/cfrac_pred_2026-10-28/slices_fit.csv new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/README.md new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/anode_dot.csv new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/elmer_phys.log new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/elmer_weight.log new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/elmergrid.log new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/geometry.py new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/probe_fields.py new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/scalars.dat new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/scalars.dat.names new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/scalars_weight.dat new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/scalars_weight.dat.names new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/wires2d.sif new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/wires2d_weight.sif new file: anasen_fem/cfrac_pred_2026-10-28/solve_z44.7820/wires_gmsh2d_bc.py devel_vignesh Vignesh Sitaraman 2026-11-04 16:49:26 -0500
  • 8be662d0d1 modified: TrackRecon.C added fine timing correction modified: run_17F.sh updating to new format and including some other changes also updated the eloss files for 4% Vignesh Sitaraman 2026-10-23 10:32:40 -0400
  • d4856783e7 modified: .gitignore renamed: cross_section/examples/paap_ta_runs_hist.toml -> cross_section/examples/paap_ta_runs.toml Vignesh Sitaraman 2026-10-17 14:37:36 -0400
  • d63a422a41 modified: TrackRecon.C new folder: cross_section, this folder allows for cross section calculations for the ANASEN data, a readme and some example files are provided modified: run_tr.sh Vignesh Sitaraman 2026-10-17 12:38:35 -0400
  • 8c231120d8 modified: TrackRecon.C Vignesh Sitaraman 2026-10-16 16:52:47 -0400
  • 8043237b89 modified: TrackRecon.C removing double counting from the qqq and a si dither toggle modified: eloss_calculations/Eloss.py changed from mass fraction to stoichiometry based on the catima documentation also regeneretated files and pushed modified: run_17F.sh modified: run_27Al.sh changed the Eloss dedx factor based on thenew stoichimetry basis as oppoosed to the mass fraction modified: run_tr.sh modified: scratch/overlay_2d.C restructured the beam E gates for the 2d overlay plots Vignesh Sitaraman 2026-10-16 06:40:37 -0400
  • 30a1621023 yaml devel_james James Szalkie 2026-10-15 12:56:43 -0400
  • 729444bdcf QQQ tracking (set to alpha scatter) James Szalkie 2026-10-15 12:13:31 -0400
  • 3e0c7690fb maintenance push James Szalkie 2026-10-05 12:21:24 -0400
  • a0f2f65c70 removed unphysical Ex James Szalkie 2026-10-02 13:56:42 -0400
  • 14b1a89d65 modified: TrackRecon.C modified: run_tr.sh Vignesh Sitaraman 2026-10-01 14:45:55 -0400
  • 12c4c87ba0 modified: pccal/fit_pc_energy_calibration.C changes for the adc limit and the lower limit to fit for the pc based on each weire separately Vignesh Sitaraman 2026-09-30 16:43:20 -0400
  • c9339a1165 modified: Armory/ClassPW.h changed because lowest cluster was getting deleted leading to loss of data modified: TrackRecon.C loss/ halucination for pc calib due to ADC ceiling being placed on gainmatched files instead of the raw modified: pc_energy_calibration.dat calibration fie,updated to get the "real" calibrated signal as proposed by the Alpha calibration run Vignesh Sitaraman 2026-09-30 16:38:54 -0400
  • 5193da6abc recoil recon James Szalkie 2026-09-30 14:07:31 -0400
  • 172594a90a removed playing god James Szalkie 2026-09-28 12:03:46 -0400
  • ea79180595 modified: TrackRecon.C added alpha eloss/efix plots modified: run_27Al.sh Vignesh Sitaraman 2026-09-28 10:17:37 -0400
  • 8806af3f6d modified: TrackRecon.C modified: anasen_fem/wires2d.sif modified: run_tr.sh Vignesh Sitaraman 2026-09-25 23:05:24 -0400
  • f2c53940f6 proper kinematic technique James Szalkie 2026-09-24 13:46:04 -0400
  • 29ae11a035 proper labelling James Szalkie 2026-09-24 12:17:06 -0400
  • 01783858fa modified: Armory/ClassPW.h modified: Armory/PCZRecon.h modified: TrackRecon.C Vignesh Sitaraman 2026-09-24 11:39:50 -0400
  • 17bbf30c42 organized labels James Szalkie 2026-09-24 10:28:13 -0400
  • 018a92f647 modified: TrackRecon.C proton beam energy correction modified: anasen_fem/run.py modified: anasen_fem/scalars.dat.names modified: anasen_fem/scalars_weight.dat.names Vignesh Sitaraman 2026-09-23 15:17:49 -0400
  • 3edbfa5bd8 modified: anasen_fem/README.md added the Shockley-Ramo dot calculation capability adapted fom Sudarsan's branch with a new visusalisation scheme to show the +ve and-ve sides on a logscale modified: anasen_fem/clean.sh new file: anasen_fem/dotproduct.py new file: anasen_fem/paraview_dotproduct.py modified: anasen_fem/paraview_plotter.py modified: anasen_fem/run.py modified: anasen_fem/scalars.dat.names new file: anasen_fem/scalars_weight.dat new file: anasen_fem/scalars_weight.dat.names modified: anasen_fem/wires2d.sif new file: anasen_fem/wires2d_weight.sif modified: anasen_fem/wires_gmsh2d_bc.py Vignesh Sitaraman 2026-09-23 12:14:05 -0400
  • aebb9854ec modified: TrackRecon.C corrected a1c1 factors and diagnostics Vignesh Sitaraman 2026-09-21 18:11:38 -0400
  • 34b9fd5f3d new vZ recon from known Ex James Szalkie 2026-09-21 11:33:59 -0400
  • 19262299ba modified: run_27Al.sh modified: run_tr.sh Vignesh Sitaraman 2026-09-18 17:48:37 -0400
  • f30e244d27 modified: TrackRecon.C the code was NOT dead Vignesh Sitaraman 2026-09-18 17:48:06 -0400
  • 397c410320 Revert " modified: TrackRecon.C removed some dead code, changed cfrac parameters for 27Al and 17F" Vignesh Sitaraman 2026-09-18 17:27:27 -0400
  • cc32682de3 modified: TrackRecon.C removed some dead code, changed cfrac parameters for 27Al and 17F Vignesh Sitaraman 2026-09-18 16:57:54 -0400
  • d4e7c18040 square PC James Szalkie 2026-09-15 16:18:27 -0400
  • e8a43509b9 increase smudge James Szalkie 2026-09-14 13:21:55 -0400
  • 7ec86569fb modified: TrackRecon.C aded a2c1 and a2c2 toplogies just to see waht tehy look like modified: run_27Al.sh modified: run_tr.sh new file: scratch/RunwiseTrend.C diagnostics to see variationwith run modified: slope_intercept_results_17F.dat Vignesh Sitaraman 2026-09-14 11:00:08 -0400
  • bbf00ad3c6 modified: TrackRecon.C added 2.23 gated ex_vs_something spectra as a diagnostic for the 27Al run Vignesh Sitaraman 2026-09-13 13:05:35 -0400
  • 7be00bcb3f modified: TrackRecon.C added qqq xy diagnostics for beam Vignesh Sitaraman 2026-09-10 14:45:55 -0400
  • d46f456fd9 modified: TrackRecon.C modified: eloss_calculations/Eloss.py modified: eloss_calculations/alpha_lookup_50MeV_250torr_4pc.dat redone at 0.89 modified: eloss_calculations/aluminum_lookup_80MeV_250torr_4pc.dat modified: eloss_calculations/deutron_lookup_30MeV_250torr_4pc.dat modified: eloss_calculations/fluorine_lookup_70MeV_250torr_4pc.dat modified: eloss_calculations/oxygen_lookup_70MeV_250torr_4pc.dat modified: eloss_calculations/proton_lookup_30MeV_250torr_4pc.dat modified: run_17F.sh modified: run_27Al.sh Vignesh Sitaraman 2026-09-10 10:47:51 -0400
  • 97357e383e modified: TrackRecon.C Vignesh Sitaraman 2026-09-10 08:19:16 -0400
  • c6c8be8cde anode location blur James Szalkie 2026-09-09 13:24:21 -0400
  • 83114262db modified: TrackRecon.C Vignesh Sitaraman 2026-09-09 10:49:17 -0400
  • 9b2c20daca modified: TrackRecon.C modified: scratch/make_prettyplots.C Vignesh Sitaraman 2026-09-08 15:35:43 -0400
  • 38c8c7e0e0 modified: TrackRecon.C put in timing gates and phi gates uniformly modified: .gitignore deleted: Analysis.C deleted: Analyzer.C deleted the older analysis formats deleted: Analyzer.h deleted: Timing_Summary_Matplotlib.png deleted: WedgeChVAnode.jpeg modified: run_tr.sh modified: scratch/make_prettyplots.C added rebinning capability and log z scale option Vignesh Sitaraman 2026-09-08 14:37:04 -0400
  • ec43a81030 modified: TrackRecon.C implemented and applied beamtilt parameter calcualtion and application modified: run_27Al.sh new file: scratch/FitBeamAxis.C code to figure out beamtilt Vignesh Sitaraman 2026-09-07 09:57:13 -0400
  • 7f936f6a53 modified: run_27Al.sh testing beamtilt theory Vignesh Sitaraman 2026-09-06 16:05:13 -0400
  • 048b11fce3 modified: .gitignore new file: CLAUDE.md Vignesh Sitaraman 2026-09-06 13:41:38 -0400
  • d3c4c47e41 modified: TrackRecon.C modified: run_tr.sh Vignesh Sitaraman 2026-09-06 10:43:55 -0400
  • fde75b8a77 modified: TrackRecon.C modified: run_27Al.sh Vignesh Sitaraman 2026-09-04 14:44:10 -0400
  • 80b079b81d deleted: Armory/mass20.txt modified: TrackRecon.C paap gating modified: run_17F.sh modified: run_27Al.sh modified: run_tr.sh modified: scratch/overlay_2d.C Vignesh Sitaraman 2026-09-04 10:16:34 -0400
  • 78add5432a modified: TrackRecon.C added plots for dE_cal vs dT and Ex vs dT modified: eloss_calculations/alpha_lookup_50MeV_250torr_3pc.dat for 0.89 dedx modified: eloss_calculations/aluminum_lookup_80MeV_250torr_3pc.dat modified: eloss_calculations/deutron_lookup_30MeV_250torr_3pc.dat modified: eloss_calculations/fluorine_lookup_70MeV_250torr_3pc.dat modified: eloss_calculations/oxygen_lookup_70MeV_250torr_3pc.dat modified: eloss_calculations/proton_lookup_30MeV_250torr_3pc.dat modified: run_27Al.sh collapsed the parallelization a bit modified: scratch/overlay_2d.C added minz, rebinning and box option Vignesh Sitaraman 2026-09-02 13:29:16 -0400
  • ffb1c1a960 modified: TrackRecon.C modified: scratch/overlay_2d.C Vignesh Sitaraman 2026-09-02 09:44:36 -0400
  • 4d9145d532 modified: TrackRecon.C mismatched braces Vignesh Sitaraman 2026-09-02 09:31:54 -0400
  • fce1fb6c1d modified: TrackRecon. Vignesh Sitaraman 2026-09-02 09:24:56 -0400
  • bf8d4089f1 modified: TrackRecon.C modified: run_17F.sh Vignesh Sitaraman 2026-09-02 08:39:47 -0400
  • 941f450af1 modified: TrackRecon.C modified: scratch/overlay_2d.C Vignesh Sitaraman 2026-09-01 14:05:46 -0400
  • 461d60a50c modified: eloss_calculations/Eloss.py trying out with 0.89/0.9 multiplier on all particles modified: eloss_calculations/alpha_lookup_50MeV_250torr_3pc.dat modified: eloss_calculations/aluminum_lookup_80MeV_250torr_3pc.dat modified: eloss_calculations/deutron_lookup_30MeV_250torr_3pc.dat modified: eloss_calculations/fluorine_lookup_70MeV_250torr_3pc.dat modified: eloss_calculations/oxygen_lookup_70MeV_250torr_3pc.dat modified: eloss_calculations/proton_lookup_30MeV_250torr_3pc.dat new file: scratch/overlay_2d.C small script to overlay multiple 2d histograms from the same file various scripts used to optimise the different parameters in the analysis new file: scratch/CompareElasticLocus.C new file: scratch/PlotDedxScan.C new file: scratch/RunMultiFit.C new file: scratch/ScanDedxScale.C Vignesh Sitaraman 2026-09-01 11:43:28 -0400
  • d245fc2679 modified: TrackRecon.C fixed typo Vignesh Sitaraman 2026-09-01 06:41:04 -0400
  • dd6b938eb2 new file: MiscEdE.C plotting the radioactive beam IC PID as well as looking for timing coincideences between that and the MCP-Rf time new file: run_misc_ede.sh same as above modified: TrackRecon.C added beamE gated plots for the step aladder for 27Al modified: run_17F.sh doing more files now modified: run_27Al.sh scaling change to 0.9 to try it out modified: run_tr.sh modified: scratch/make_prettyplots.C add log scale option to the 2D plots Vignesh Sitaraman 2026-09-01 06:24:36 -0400
  • 3dd678221a modified: TrackRecon.C implementation of Ex vs TOF plot not working rn Vignesh Sitaraman 2026-08-31 14:58:29 -0400
  • b5e88a6731 modified: TrackRecon.C minor changes Vignesh Sitaraman 2026-08-31 14:36:54 -0400
  • d211971904 modified: TrackRecon.C added topology gated spectra as well as calibrated versions of the a2 ratio plots Vignesh Sitaraman 2026-08-31 09:40:14 -0400
  • 6619613db5 modified: TrackRecon.C restructuring the p(a,a)p branch to make it more readable need to implement per topo version of plots modified: run_27Al.sh modified: run_tr.sh Vignesh Sitaraman 2026-08-30 14:29:45 -0400
  • e6d60cf1a5 angular straggling James Szalkie 2026-08-28 15:54:33 -0400
  • af1ea4144a resolution updates James Szalkie 2026-08-28 12:25:50 -0400
  • edc7776493 kinematics reconstruction updates James Szalkie 2026-08-27 16:19:12 -0400
  • e83775d79f modified: TrackRecon.C added some plots, perppeing for more major changes to the proton branch modified: run_17F.sh modified: run_27Al.sh Vignesh Sitaraman 2026-08-27 10:29:24 -0400
  • bc13d24d55 kinematics header James Szalkie 2026-08-26 15:11:18 -0400
  • 3567f84f82 gaussian straggling James Szalkie 2026-08-26 14:21:47 -0400
  • 55e04f228d straggling James Szalkie 2026-08-26 13:45:34 -0400
  • 8cd98c35e1 modified: .gitignore added Ryan's autofit routine to gitignore Vignesh Sitaraman 2026-08-26 12:11:58 -0400
  • 0a9dc19904 catches all events James Szalkie 2026-08-25 12:01:40 -0400
  • 8240310039 sanitized James Szalkie 2026-08-25 11:14:10 -0400
  • a0c4e3a7ac plotting updates James Szalkie 2026-08-24 10:42:51 -0400
  • 3e60105617 modified: TrackRecon.C remoevd the gated proton spectra dn introduced new histos where we "snap" to different exicited state and plto the Ekin_vs_Etrack modified: run_27Al.sh dEdx scaling scan Vignesh Sitaraman 2026-08-21 13:45:18 -0400
  • 9e9222283e Eloss updates James Szalkie 2026-08-20 17:04:08 -0400
  • a4bedd877f Eloss into cpp James Szalkie 2026-08-19 16:12:27 -0400
  • d1d1f5d947 ELoss into MC James Szalkie 2026-08-19 15:10:59 -0400
  • c0c49be0c9 modified: TrackRecon.C consolidated the ditehr sigma, the timing cuts and reset the beam xy to (0,0), beamenergy gets set to 0.001 instead of returning for values that are beyond calculated catima range. Moved some diagnostic plots because they were out of range for the boleans to actually catch them, lifted the si time ditehring so that it gets applied everywhere for smootehr time plots. modified: eloss_calculations/Eloss.py introduced a external scaling factr to allow eloss calculations to be paired with the run scripts to figure out the right dEdx scaling modified: run_27Al.sh Vignesh Sitaraman 2026-08-18 15:14:18 -0400
  • 9416638af6 modified: TrackRecon.C changed the vertex by wire to be calibrated dE Vignesh Sitaraman 2026-08-17 13:53:26 -0400
  • 0a7dd1bcf6 modified: TrackRecon.C gate changes Vignesh Sitaraman 2026-08-17 11:37:21 -0400
  • cf584a6d7a modified: Armory/PCZRecon.h added a2c0 modified: TrackRecon.C added a2c0, changed a1c1 cfrac parameters based on optimisation for the alpha and source data. Might need to be changed for the reaction though dfo rsome reason the apramteres don't quite makes sense modified: eloss_calculations/Eloss.py added a scaling factor to particles with A>10 based to make the beams go further into the detector based on reaction data modified: pc_energy_calibration.dat halved the anode dE cal to account for the misamtch between calib and rpedict for the source data Vignesh Sitaraman 2026-08-17 11:05:22 -0400
  • c83557f30c modified: Armory/PCZRecon.h changed from vertex xy checks which al;way s defaulted to the same version to a proximity check to the wire ( using pitchok) modified: TrackRecon.C added diagnostic plots for recon and eloss Vignesh Sitaraman 2026-08-14 14:22:08 -0400
  • ed505139b4 modified: pc_energy_calibration.dat corrected calibs for 16 18 20 and 23 Vignesh Sitaraman 2026-08-13 20:54:42 -0400
  • fe90cc39b3 DS Store James Szalkie 2026-08-13 12:47:20 -0400
  • 86a8858905 training data James Szalkie 2026-08-13 12:47:00 -0400
  • 5223401bd8 Eloss data James Szalkie 2026-08-13 12:44:05 -0400
  • a3282ae394 ignore James Szalkie 2026-08-13 12:43:07 -0400
  • cb22da5f57 anasen cpp updates James Szalkie 2026-08-13 12:42:50 -0400
  • b5add710e5 Training builder James Szalkie 2026-08-13 12:42:13 -0400
  • 7181b80635 ML script James Szalkie 2026-08-13 12:41:44 -0400
  • bdc8949d38 ignore James Szalkie 2026-08-13 12:31:51 -0400
  • 9b68c5b720 modified: TrackRecon.C added some more diagnostics plots for the reaciton dataset Vignesh Sitaraman 2026-08-13 11:11:29 -0400
  • 98c48af0b1 new file: Armory/PCZRecon.h refactor to lift a1c0 and a1c1 frac into a class PCZRecon which includes the a1c2 slope correction as well. Making the code more readable and easier to maintain. also changes the model_invert into a function call instead of using the TF1 class modified: TrackRecon.C refactor plus removal of older vesions of pcz and track reconstruction from the old analysis. Changed the ranges for dECalib spectra since their max was way too high. modified: pc_energy_calibration.dat changed the calibration of anode 2-4 to the same as anode1 and 5 to 6 becuase they were causing bifuraction in signal. This might have been happening because the 17F data is poisoning the calibraion. This hypothesis is pending validation however. Vignesh Sitaraman 2026-08-12 15:02:35 -0400
  • fbd601ec40 modified: run_27Al.sh Vignesh Sitaraman 2026-08-12 10:29:51 -0400
  • 21fd1ca4d2 modified: TrackRecon.C correction of cathode multiplicity gate on teh pc events Vignesh Sitaraman 2026-08-11 14:43:38 -0400
  • 542e927049 modified: TrackRecon.C correction of cathode multiplicity gate on teh pc events Vignesh Sitaraman 2026-08-11 14:43:38 -0400
  • 2784671732 modified: TrackRecon.C PID gate on the suspected proton locus and prudcing the Ex function corresponding to the state. Also implemented a1c0 dithering for the reaction data Vignesh Sitaraman 2026-08-11 14:19:29 -0400
  • 774050dfdf modified: TrackRecon.C Vignesh Sitaraman 2026-08-11 12:58:36 -0400
  • caeff0d7c5 modified: TrackRecon.C rehaul of the calibration dynamic so that any channels that dont have sufficient sx3 a1c2 stats get calibrated by lining up their centroids with those that do. Still a bit iffy on the bad anode formalism but keeping it in for now. modified: pc_energy_calibration.dat modified: pccal/fit_pc_energy_calibration.C Vignesh Sitaraman 2026-08-10 14:27:52 -0400
  • 18cb077fe2 Randomized energy fix James Szalkie 2026-08-10 10:52:20 -0400
  • 6ff00bedc2 modified: pc_energy_calibration.dat modified: run_27Al.sh Vignesh Sitaraman 2026-08-08 15:00:51 -0400
  • 8e9d539653 modified: TrackRecon.C Vignesh Sitaraman 2026-08-08 14:59:52 -0400
  • 902afaad54 pcgain Vignesh Sitaraman 2026-08-07 11:02:49 -0400